Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002154-TA|BGIBMGA002154-PA|undefined
(205 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0149 - 18441561-18442082,18442723-18442861,18443295-184433... 30 1.2
01_07_0198 - 41918276-41918408,41918486-41918841,41919091-419192... 30 1.2
06_01_0653 - 4720913-4721152,4721898-4721966,4722059-4722124,472... 30 1.5
01_06_1655 + 38940790-38940864,38941245-38942057,38942149-389422... 29 2.0
07_03_1116 - 24084162-24084201,24084481-24084570,24084640-240852... 29 2.7
03_02_0709 + 10583621-10583626,10583711-10584712,10585304-10585669 29 3.5
09_05_0012 - 20063456-20064601 28 4.6
12_01_0842 - 7877286-7877628,7877848-7877917,7877984-7878113 28 6.1
10_08_0224 - 15993497-15994075 28 6.1
06_03_0744 - 24098670-24098951 28 6.1
05_03_0289 - 11688733-11691342 28 6.1
02_05_0912 - 32689665-32690007,32690117-32690275,32690380-326905... 28 6.1
09_02_0176 + 5376868-5377205,5377703-5378831 27 8.1
06_03_0455 + 20978658-20978677,20979104-20979608 27 8.1
05_03_0107 - 8470386-8470559,8470694-8471737 27 8.1
02_04_0459 + 23117439-23117966 27 8.1
>05_04_0149 -
18441561-18442082,18442723-18442861,18443295-18443352,
18443630-18443664,18444528-18444886,18445304-18445450,
18445849-18447954,18448300-18448494,18448629-18448709,
18448758-18448874,18449281-18449370,18449466-18449552,
18450293-18450315,18450675-18450804
Length = 1362
Score = 30.3 bits (65), Expect = 1.2
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 3 HAALVSGSARLGCRIVGGITSSGPVINEGRRLVTVPSESESVGG--TCGAACGLHFRHSA 60
H A+V+ + +L G S G + + R+ ++VP E ES+ G T AACG+ H+A
Sbjct: 496 HTAIVTSAGQL---FTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVW--HTA 550
Query: 61 ARMQTRIG 68
A ++ +G
Sbjct: 551 AVVEVMVG 558
>01_07_0198 -
41918276-41918408,41918486-41918841,41919091-41919237,
41919666-41921789,41922150-41922344,41922488-41922568,
41923325-41923414,41923507-41923593,41923914-41923961
Length = 1086
Score = 30.3 bits (65), Expect = 1.2
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 3 HAALVSGSARLGCRIVGGITSSGPVINEGRRLVTVPSESESVGG--TCGAACGLHFRHSA 60
H ALV+ + +L G S G + + R ++VP E ES+ G T AACG+ H+A
Sbjct: 422 HTALVTSAGQL---FTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVW--HTA 476
Query: 61 ARMQTRIG 68
A ++ +G
Sbjct: 477 AVVEVMVG 484
>06_01_0653 -
4720913-4721152,4721898-4721966,4722059-4722124,
4722814-4722879,4723001-4723162,4723255-4723347,
4723449-4723541,4723626-4724273
Length = 478
Score = 29.9 bits (64), Expect = 1.5
Identities = 23/91 (25%), Positives = 34/91 (37%), Gaps = 3/91 (3%)
Query: 103 GADLSAQPQLWTASGGSPSYGSNAILADEYAESAAEGGGSLPSFNT---RFGGAFACATS 159
GA A + G+PS NA +A + GGS+PSF T G A
Sbjct: 187 GAQNVAMLNKTSLPNGNPSLFDNAAIASLHDSKEFLNGGSIPSFGTVLQALGAGGLKAAQ 246
Query: 160 RPSTVYGAPALASNAYAHQFASPQKMQPQPS 190
+ + P + +H + + P PS
Sbjct: 247 QEQNIRNIPLPTFTSGSHLAVTDAQGPPLPS 277
>01_06_1655 +
38940790-38940864,38941245-38942057,38942149-38942268,
38942883-38943566
Length = 563
Score = 29.5 bits (63), Expect = 2.0
Identities = 27/105 (25%), Positives = 40/105 (38%), Gaps = 1/105 (0%)
Query: 57 RHSAARMQTRIGTQHXXXXXXXXXXXXXXXVYTRCAFNSAAPYFTNGADLSAQPQLWTAS 116
RH A + Q V A + + Y T A +A+P+ +
Sbjct: 367 RHEAEAAAALLSRQRVEHVGNGGGGGRHVAVTATPARSVVSSYSTATATTAARPRATRPA 426
Query: 117 GGSPSYGSN-AILADEYAESAAEGGGSLPSFNTRFGGAFACATSR 160
+ SYG +I DE S GG+LP++ T A A A +R
Sbjct: 427 KVASSYGGGGSIRDDESLTSCPAFGGALPNYMTPTMSASAKARAR 471
>07_03_1116 -
24084162-24084201,24084481-24084570,24084640-24085220,
24085653-24085822,24086006-24087074
Length = 649
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 143 LPSFNTRFGGAFACATSRPSTVYGAPALASNAYAHQFASPQKMQP 187
+PS+ R+G A + PS Y PA AS + + + P + P
Sbjct: 507 MPSYPDRYGHADRYHYTAPSATYDPPAYASYSEPYSASKPYQYTP 551
>03_02_0709 + 10583621-10583626,10583711-10584712,10585304-10585669
Length = 457
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Query: 15 CRIVGGITSSGPVINEGRRLVTVPSESESVGGTCGAACGLHFRHSAAR 62
CR G+ PVI R T+P + + C HFRHS R
Sbjct: 402 CRFAHGLQELRPVIRHPR-YKTLPCQMFAAASGCPYGHRCHFRHSPLR 448
>09_05_0012 - 20063456-20064601
Length = 381
Score = 28.3 bits (60), Expect = 4.6
Identities = 27/85 (31%), Positives = 34/85 (40%), Gaps = 7/85 (8%)
Query: 108 AQPQLWTASGGSPSYGSNAILADEYAESAAEGGGSLPSF---NTRFGGAFACATSRPSTV 164
A P L GGS S S A A GGG++P T GG A + P+TV
Sbjct: 248 ADPLLQANGGGSISISSGLAPASSATPPTATGGGAIPFIAMPATSDGGKQAMS---PATV 304
Query: 165 YGAPALASNAYAHQFASPQKMQPQP 189
+ P + A +Q QP P
Sbjct: 305 WMVPPGGAGA-VNQPIQYWAFQPNP 328
>12_01_0842 - 7877286-7877628,7877848-7877917,7877984-7878113
Length = 180
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 103 GADLSAQPQLWTASGGSPSYGSNAILADEYAESAA 137
G + QP+ G PSYGSN + + + + AA
Sbjct: 146 GVAAAGQPEQGRRGHGCPSYGSNKTMLELFEDEAA 180
>10_08_0224 - 15993497-15994075
Length = 192
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 135 SAAEGGGSLPSFNTRFGGAFACATSRPSTVYG 166
S GGG S+ T +GG F +S T G
Sbjct: 70 SGGGGGGGATSYGTGYGGGFGAGSSSSQTSSG 101
>06_03_0744 - 24098670-24098951
Length = 93
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 119 SPSYGSNAILADEYAESAAEGGGSLPSFNTRFGGAFACATSRPSTVYGAPALAS 172
S + G+ A A+ A + GG + + GGA A ATS + V AP LA+
Sbjct: 29 SEAGGAAAAAAEPTAPAPGAGGEAAAAGGAAAGGA-AAATSAAAVVAAAPPLAA 81
>05_03_0289 - 11688733-11691342
Length = 869
Score = 27.9 bits (59), Expect = 6.1
Identities = 10/41 (24%), Positives = 22/41 (53%)
Query: 87 VYTRCAFNSAAPYFTNGADLSAQPQLWTASGGSPSYGSNAI 127
++T A N+A+ F NG ++ + P +++ + S N +
Sbjct: 171 IFTPTAMNNASYAFVNGIEIISMPNIFSQAAASVDIAGNEV 211
>02_05_0912 -
32689665-32690007,32690117-32690275,32690380-32690573,
32690669-32690861,32690956-32692169
Length = 700
Score = 27.9 bits (59), Expect = 6.1
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 113 WTASGGSP-SYGSNAILADEYA---ESAAEGGGSLPSFNTRFGGAFACATSR--PSTVYG 166
++A+GG + GS+ ++A E E ++ G +PS N+ G A A S P+ G
Sbjct: 117 FSATGGQAGTNGSSTVVAGEQGRGVEVSSSNAGGVPSGNSPSGNATAAMQSNPPPNDQAG 176
Query: 167 APALASNA 174
A A+N+
Sbjct: 177 GGAAANNS 184
>09_02_0176 + 5376868-5377205,5377703-5378831
Length = 488
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 19 GGITSSGPVINEGRRLVTVPSESESVGGTCGAACGL 54
G IT P + E R LV + S +CG CG+
Sbjct: 432 GMITYLDPSMGECRFLVGIDDSKSSAVSSCGCGCGV 467
>06_03_0455 + 20978658-20978677,20979104-20979608
Length = 174
Score = 27.5 bits (58), Expect = 8.1
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 108 AQPQLWTASGGSPSYGSNAILADEYAESAAEGGGSLPSFNTRFGGAFACATSRPSTVYGA 167
A +L TA GG +G A A+E E+ AE ++ + GG A + P GA
Sbjct: 9 AGARLRTAGGGGGGWGLGAAGAEERPEAGAE--AAVGGRGSEAGGGQRAAGAEPRPEAGA 66
Query: 168 PA 169
A
Sbjct: 67 KA 68
>05_03_0107 - 8470386-8470559,8470694-8471737
Length = 405
Score = 27.5 bits (58), Expect = 8.1
Identities = 21/62 (33%), Positives = 26/62 (41%)
Query: 108 AQPQLWTASGGSPSYGSNAILADEYAESAAEGGGSLPSFNTRFGGAFACATSRPSTVYGA 167
A P + G+P G+ A AD+ A A G + R G A S PS GA
Sbjct: 7 APPPSTPSMVGNPDGGAPAAAADQSAPCATGGETLVGEGRLRKGKMVAEDQSPPSVSGGA 66
Query: 168 PA 169
PA
Sbjct: 67 PA 68
>02_04_0459 + 23117439-23117966
Length = 175
Score = 27.5 bits (58), Expect = 8.1
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Query: 106 LSAQPQLWTASGGSPSYGSNAILADEYAESAAEGGGSLPSFNTRFGGAFACATSRPS 162
L A Q W A G+P ++A A + A+ GGG + S TR G RPS
Sbjct: 16 LKAVAQAWHAQSGNPRAVASA--AAQGADDDG-GGGGVSSSGTRRAGVGGPGRRRPS 69
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.128 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,052,028
Number of Sequences: 37544
Number of extensions: 259981
Number of successful extensions: 762
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 753
Number of HSP's gapped (non-prelim): 19
length of query: 205
length of database: 14,793,348
effective HSP length: 79
effective length of query: 126
effective length of database: 11,827,372
effective search space: 1490248872
effective search space used: 1490248872
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
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