GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002154-TA|BGIBMGA002154-PA|undefined
         (205 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    26   0.70 
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    25   2.1  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   3.7  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   6.5  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   8.6  

>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 26.2 bits (55), Expect = 0.70
 Identities = 17/53 (32%), Positives = 22/53 (41%)

Query: 90  RCAFNSAAPYFTNGADLSAQPQLWTASGGSPSYGSNAILADEYAESAAEGGGS 142
           R  F+   P    G   +A+ +    S G  S    A + DE   S A GGGS
Sbjct: 931 RSFFSRTKPSPAGGKAAAAKQRAGNGSAGGASDPPGADVCDEIKFSMAGGGGS 983


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 2/60 (3%)

Query: 119 SPSYGSNAILADEYAESAAEGGGSLPSFNTRFGGAFACATSRPSTVYGAPALASNAYAHQ 178
           SP +G +  L       +A  GGS  +  +  G     A S P ++ G P    ++ AHQ
Sbjct: 289 SPHHGQSYGLGSSLG--SAHHGGSAGTLGSLVGKYDLSALSPPGSLGGVPGSIVSSSAHQ 346


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 14/55 (25%), Positives = 23/55 (41%)

Query: 135 SAAEGGGSLPSFNTRFGGAFACATSRPSTVYGAPALASNAYAHQFASPQKMQPQP 189
           S+  GG   P    +     + +T+  S   G P+ + +A+A    SP    P P
Sbjct: 736 SSVSGGDWSPMGGDQQNSNGSSSTASSSVSTGMPSPSRSAFADGIGSPPPPPPPP 790


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 107 SAQPQLWTASGGSPSYGSNAILADEYAESAAEGGG 141
           SA P+  T +GG P   SNA+  +        GGG
Sbjct: 917 SASPKA-TVAGGLPLLPSNALAGNNGVIMTGVGGG 950


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 10/81 (12%)

Query: 110 PQLWTASGGSPSYGSNAILADEYAESAAEGGGSLPSFNTRFGGAFACATSRPSTVYGAPA 169
           P  W +  GS    S+A  A     SA+ GG      + R   +   +    S + G P 
Sbjct: 222 PSSWMSGAGSVGGPSSAAAA---MLSASSGGQQQ---HARLSSSLPLS----SVIGGPPG 271

Query: 170 LASNAYAHQFASPQKMQPQPS 190
           + +N      +S Q+ Q QPS
Sbjct: 272 MVNNGLRAPPSSQQQPQQQPS 292


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.128    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,977
Number of Sequences: 2123
Number of extensions: 7292
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 6
length of query: 205
length of database: 516,269
effective HSP length: 61
effective length of query: 144
effective length of database: 386,766
effective search space: 55694304
effective search space used: 55694304
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 46 (22.6 bits)