GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002154-TA|BGIBMGA002154-PA|undefined
         (205 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    23   2.1  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    23   2.1  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    21   6.3  

>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
          protein.
          Length = 125

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 3/46 (6%)

Query: 25 GPVINEGRRLVTVPSESESVGGTCGAACGLHFRHSAARMQTRIGTQ 70
          GP  NEGR L  +  ++ S G  C   C    +H+A ++   + T+
Sbjct: 51 GPCTNEGRELKKILPDALSTG--CN-KCNEKQKHTANKVVNYLKTK 93


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
          protein.
          Length = 125

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 3/46 (6%)

Query: 25 GPVINEGRRLVTVPSESESVGGTCGAACGLHFRHSAARMQTRIGTQ 70
          GP  NEGR L  +  ++ S G  C   C    +H+A ++   + T+
Sbjct: 51 GPCTNEGRELKKILPDALSTG--CN-KCNEKQKHTANKVVNYLKTK 93


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/27 (29%), Positives = 13/27 (48%)

Query: 105 DLSAQPQLWTASGGSPSYGSNAILADE 131
           ++  + Q W    G+P Y S  +L  E
Sbjct: 61  EVQGEAQAWFGFAGTPGYLSPEVLKKE 87


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.315    0.128    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,848
Number of Sequences: 429
Number of extensions: 1547
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 205
length of database: 140,377
effective HSP length: 55
effective length of query: 150
effective length of database: 116,782
effective search space: 17517300
effective search space used: 17517300
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 42 (21.0 bits)