GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002153-TA|BGIBMGA002153-PA|undefined
         (174 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P52167-3 Cluster: Isoform 3 of P52167 ; n=1; Bombyx mor...    67   2e-10
UniRef50_P52167 Cluster: Transcription factor BCFI; n=3; Bombyx ...    67   2e-10
UniRef50_Q7RXK8 Cluster: Putative uncharacterized protein NCU002...    35   1.2  
UniRef50_A5USN2 Cluster: Glycosyl transferase, group 1; n=3; Chl...    33   2.7  
UniRef50_A1R8U8 Cluster: Putative integral membrane protein; n=1...    33   4.8  
UniRef50_Q61CT7 Cluster: Putative uncharacterized protein CBG127...    33   4.8  
UniRef50_Q8UZB4 Cluster: Putative uncharacterized protein; n=1; ...    32   6.3  
UniRef50_Q9VWS5 Cluster: CG15040-PA; n=2; Sophophora|Rep: CG1504...    32   6.3  
UniRef50_A7SQ28 Cluster: Predicted protein; n=2; Nematostella ve...    32   6.3  
UniRef50_Q5K9H9 Cluster: Putative uncharacterized protein; n=1; ...    32   8.4  

>UniRef50_P52167-3 Cluster: Isoform 3 of P52167 ; n=1; Bombyx
           mori|Rep: Isoform 3 of P52167 - Bombyx mori (Silk moth)
          Length = 477

 Score = 67.3 bits (157), Expect = 2e-10
 Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 3/58 (5%)

Query: 68  AHARDMQPYAHLDDALFKPPTPGAASTDGVYLRRSPELSPSPERRD-DYRPPAPLHYE 124
           AH+ DMQPY+HLDD+LFKPPTPG+A          P  S +P RR    RPPAPLHY+
Sbjct: 41  AHSLDMQPYSHLDDSLFKPPTPGSAPPTASTCAGVP--SSAPRRRPRRLRPPAPLHYD 96


>UniRef50_P52167 Cluster: Transcription factor BCFI; n=3; Bombyx
           mori|Rep: Transcription factor BCFI - Bombyx mori (Silk
           moth)
          Length = 508

 Score = 67.3 bits (157), Expect = 2e-10
 Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 3/58 (5%)

Query: 68  AHARDMQPYAHLDDALFKPPTPGAASTDGVYLRRSPELSPSPERRD-DYRPPAPLHYE 124
           AH+ DMQPY+HLDD+LFKPPTPG+A          P  S +P RR    RPPAPLHY+
Sbjct: 41  AHSLDMQPYSHLDDSLFKPPTPGSAPPTASTCAGVP--SSAPRRRPRRLRPPAPLHYD 96


>UniRef50_Q7RXK8 Cluster: Putative uncharacterized protein NCU00219.1;
            n=1; Neurospora crassa|Rep: Putative uncharacterized
            protein NCU00219.1 - Neurospora crassa
          Length = 1826

 Score = 34.7 bits (76), Expect = 1.2
 Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 3/83 (3%)

Query: 86   PPTPGAASTDGVYLRRSPELSPSPERRDDYRPPAPLHYEXXXXXXXXXXXXXXXLEQLTT 145
            PPT  AA+T      R P  +P+PE R +  P  PL                   EQ  T
Sbjct: 1232 PPTEPAAATTTSLPPRGPVKTPTPEPRTELPPRLPL--SALSSPSFTSSRRPSVPEQAPT 1289

Query: 146  PHAECEPLRITLTTPPQTSSRSA 168
            P  + +P  +    PP+   +SA
Sbjct: 1290 PEPQPQP-EVQSPPPPKVPPKSA 1311


>UniRef50_A5USN2 Cluster: Glycosyl transferase, group 1; n=3;
           Chloroflexi (class)|Rep: Glycosyl transferase, group 1 -
           Roseiflexus sp. RS-1
          Length = 413

 Score = 33.5 bits (73), Expect = 2.7
 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 4/40 (10%)

Query: 84  FKPPTP----GAASTDGVYLRRSPELSPSPERRDDYRPPA 119
           F PP P    GA   DGV +RR P   P P   + Y PPA
Sbjct: 49  FSPPVPHYRTGADVVDGVPVRRFPITPPRPAPHEPYVPPA 88


>UniRef50_A1R8U8 Cluster: Putative integral membrane protein; n=1;
           Arthrobacter aurescens TC1|Rep: Putative integral
           membrane protein - Arthrobacter aurescens (strain TC1)
          Length = 1415

 Score = 32.7 bits (71), Expect = 4.8
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)

Query: 63  QELRPAHARDMQ--PYAHLDDALFKPPTPGAASTDGVYLRR-----SPELSPSPERRDDY 115
           Q++  A AR  Q  P +     +  PP P ++    VYL+R     +P   P P+ R  +
Sbjct: 63  QDVNRAAARTAQQAPISSPPAPVSSPPAPVSSPPAPVYLQRPVQAPAPPAMPLPDVRSPF 122

Query: 116 RPPAP 120
           RPP+P
Sbjct: 123 RPPSP 127


>UniRef50_Q61CT7 Cluster: Putative uncharacterized protein CBG12769;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG12769 - Caenorhabditis
           briggsae
          Length = 1372

 Score = 32.7 bits (71), Expect = 4.8
 Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 63  QELRPAHARDMQPYAHLDDALFKPPTPGAASTDGVYLRRSP--ELSPSPERRDDYRPPAP 120
           Q + P HA    P   +   L  P  PGA       +++ P  + +P P+      P  P
Sbjct: 382 QAVHPGHAHAGHPMGAIPQQLLPPHHPGAQGHPNFQIKQEPPSQFTPQPQPTPQPMPQHP 441

Query: 121 LH 122
           +H
Sbjct: 442 MH 443


>UniRef50_Q8UZB4 Cluster: Putative uncharacterized protein; n=1;
           Grapevine fleck virus|Rep: Putative uncharacterized
           protein - Grapevine fleck virus
          Length = 309

 Score = 32.3 bits (70), Expect = 6.3
 Identities = 15/36 (41%), Positives = 19/36 (52%)

Query: 86  PPTPGAASTDGVYLRRSPELSPSPERRDDYRPPAPL 121
           PP P AA +    L  +P  S +P  R + RPP PL
Sbjct: 129 PPPPSAAPSSSAALSSAPPPSTAPLPRHEPRPPPPL 164


>UniRef50_Q9VWS5 Cluster: CG15040-PA; n=2; Sophophora|Rep: CG15040-PA
            - Drosophila melanogaster (Fruit fly)
          Length = 1895

 Score = 32.3 bits (70), Expect = 6.3
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 10/62 (16%)

Query: 61   SYQELRPAHARDMQPYAHLDDALFKPPTPGAASTDGVYLRRSPELSPSPERRDDYRPPAP 120
            S  +  P +++   PY   + ALF     G +   G+Y+R  P   P+P       PP P
Sbjct: 1177 SGNQFNPMYSQQQWPYPDYNAALFSKEQAGPS---GIYMRPPPPAQPTP-------PPHP 1226

Query: 121  LH 122
            LH
Sbjct: 1227 LH 1228


>UniRef50_A7SQ28 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 1000

 Score = 32.3 bits (70), Expect = 6.3
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 3/51 (5%)

Query: 75  PYAHLDDALFKPPTPGAASTDGVYLRRSPELSPSPERRDDYR---PPAPLH 122
           P    DD   + P P    T+    RR P L P+P+R  D +   PP P H
Sbjct: 782 PKPQFDDTPTRAPPPPDMQTNPDTERRPPPLPPAPKRALDLKPNLPPVPTH 832


>UniRef50_Q5K9H9 Cluster: Putative uncharacterized protein; n=1;
           Filobasidiella neoformans|Rep: Putative uncharacterized
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 1352

 Score = 31.9 bits (69), Expect = 8.4
 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 86  PPTPGAASTDGVYLRRSPELSPSPERRDDYRPPAP 120
           PP PG  S+D + L R+  L  S  R  D RPPAP
Sbjct: 32  PPKPGDGSSDILQL-RAAALRSSTARSQDPRPPAP 65


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.316    0.131    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,079,101
Number of Sequences: 1657284
Number of extensions: 6297545
Number of successful extensions: 16178
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 16167
Number of HSP's gapped (non-prelim): 15
length of query: 174
length of database: 575,637,011
effective HSP length: 95
effective length of query: 79
effective length of database: 418,195,031
effective search space: 33037407449
effective search space used: 33037407449
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 69 (31.9 bits)