GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002153-TA|BGIBMGA002153-PA|undefined
         (174 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.41 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   3.8  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    21   8.8  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.0 bits (52), Expect = 0.41
 Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)

Query: 90   GAASTDGVYLRRSPELS-PSPERRDDYRPPAP 120
            G     GV   + P ++ PSP +R  Y PP P
Sbjct: 971  GGCQPGGVVQSQQPIMTDPSPFKRGRYTPPQP 1002


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)

Query: 99  LRRSPELSPSPERRDDYR 116
           + RSPEL P P  + D R
Sbjct: 192 IHRSPELVPMPTLKGDGR 209


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 10/24 (41%), Positives = 10/24 (41%)

Query: 99  LRRSPELSPSPERRDDYRPPAPLH 122
           LRR PE  P   R      P P H
Sbjct: 116 LRREPEAEPGNNRPVYIPQPRPPH 139



 Score = 20.6 bits (41), Expect = 8.8
 Identities = 10/24 (41%), Positives = 10/24 (41%)

Query: 99  LRRSPELSPSPERRDDYRPPAPLH 122
           LRR PE  P   R      P P H
Sbjct: 142 LRREPEAEPGNNRPVYIPQPRPPH 165


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.131    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,383
Number of Sequences: 429
Number of extensions: 2161
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 174
length of database: 140,377
effective HSP length: 54
effective length of query: 120
effective length of database: 117,211
effective search space: 14065320
effective search space used: 14065320
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 41 (20.6 bits)