Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002151-TA|BGIBMGA002151-PA|IPR002130|Peptidyl-prolyl
cis-trans isomerase, cyclophilin type
(147 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 187 5e-49
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 133 9e-33
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 132 3e-32
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 120 7e-29
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 112 2e-26
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 107 5e-25
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 100 1e-22
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 86 2e-18
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 64 6e-12
SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr ... 25 3.6
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 25 4.7
SPBC354.13 |rga6||GTPase activating protein Rga6|Schizosaccharom... 25 6.2
SPAC3G6.09c |tps2||trehalose-phosphate synthase Tps2 |Schizosacc... 24 8.2
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 187 bits (456), Expect = 5e-49
Identities = 85/143 (59%), Positives = 106/143 (74%)
Query: 1 MGKIMLEMYWKHAPLTCRNFMELVRRGYYNNTKFHRVIRDFMIQXXXXXXXXXXXQSIYG 60
+GKI++E+Y +HAP TC+NF L + GYY+ FHRVI DF+IQ SIYG
Sbjct: 10 LGKILIELYTEHAPKTCQNFYTLAKEGYYDGVIFHRVIPDFVIQGGDPTGTGRGGTSIYG 69
Query: 61 PHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIFGRVQNGMTVV 120
F DEI SDL H GAGILSMANAGPNTN+SQFFITLAPT WLDGKHTIFGRV +G++V
Sbjct: 70 DKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSGLSVC 129
Query: 121 KRIGLVECDKNDCPVDDVRIERA 143
KR+GL+ D +D P++ ++I +A
Sbjct: 130 KRMGLIRTDSSDRPIEPLKIIKA 152
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 133 bits (322), Expect = 9e-33
Identities = 66/139 (47%), Positives = 86/139 (61%)
Query: 2 GKIMLEMYWKHAPLTCRNFMELVRRGYYNNTKFHRVIRDFMIQXXXXXXXXXXXQSIYGP 61
G I +++Y + AP +NF GYY+NT FHR+I++FMIQ +SI+
Sbjct: 464 GDISIKLYPEEAPKAVQNFTTHAENGYYDNTIFHRIIKNFMIQGGDPLGDGTGGESIWKK 523
Query: 62 HFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIFGRVQNGMTVVK 121
F+DEI+ +LKH +SMAN+GPNTN SQFFIT T WLDGKHTIF R G+ VV
Sbjct: 524 DFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGLDVVH 583
Query: 122 RIGLVECDKNDCPVDDVRI 140
RI E DK D P++ +I
Sbjct: 584 RIEQGETDKYDRPLEPTKI 602
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 132 bits (318), Expect = 3e-32
Identities = 65/140 (46%), Positives = 85/140 (60%)
Query: 2 GKIMLEMYWKHAPLTCRNFMELVRRGYYNNTKFHRVIRDFMIQXXXXXXXXXXXQSIYGP 61
G+I +E++ +AP NF++L ++GYY NT FHR I FMIQ QSI+G
Sbjct: 285 GEINIELHTDYAPHAVYNFVQLAKQGYYRNTIFHRNIARFMIQGGDPSGTGRGGQSIWGK 344
Query: 62 HFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIFGRVQNGMTVVK 121
FKDE + LKH GI+SMAN G NTN SQFFI P + LD KHTIFGRV G+ V+
Sbjct: 345 PFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLD 404
Query: 122 RIGLVECDKNDCPVDDVRIE 141
+ V + ND P +++E
Sbjct: 405 ALEKVPTNSNDHPKLPIKLE 424
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 120 bits (290), Expect = 7e-29
Identities = 63/144 (43%), Positives = 84/144 (58%), Gaps = 5/144 (3%)
Query: 1 MGKIMLEMYWKHAPLTCRNFMELV--RRGY-YNNTKFHRVIRDFMIQXXXXXXXXXXX-Q 56
+G++ + ++ K P T NF L +G+ Y + FHRVI +FMIQ +
Sbjct: 40 LGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVIPNFMIQGGDITKGDGTGGK 99
Query: 57 SIYGPHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIFGRVQNG 116
SIYG F DE L H G+LSMANAGP++N SQFFIT T WLDG H +FG V +G
Sbjct: 100 SIYGSRFPDE-NFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSG 158
Query: 117 MTVVKRIGLVECDKNDCPVDDVRI 140
+VK+I E D D P++DV+I
Sbjct: 159 YDIVKKISKAETDNRDKPLEDVKI 182
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 112 bits (269), Expect = 2e-26
Identities = 61/127 (48%), Positives = 76/127 (59%), Gaps = 5/127 (3%)
Query: 1 MGKIMLEMYWKHAPLTCRNFMELV--RRGY-YNNTKFHRVIRDFMIQXXXXXXXXXXX-Q 56
+G+I+ +++ P T NF L +GY Y + FHRVI FM+Q +
Sbjct: 15 LGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDFTRGNGTGGK 74
Query: 57 SIYGPHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIFGRVQNG 116
SIYG F DE + LKH G+LSMANAGPNTN SQFFIT T WLDGKH +FG V G
Sbjct: 75 SIYGEKFPDENFA-LKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEG 133
Query: 117 MTVVKRI 123
M VVK++
Sbjct: 134 MDVVKKV 140
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 107 bits (258), Expect = 5e-25
Identities = 66/147 (44%), Positives = 84/147 (57%), Gaps = 12/147 (8%)
Query: 4 IMLEMYWKHAPLTCRNFMELVRRGY--------YNNTKFHRVIRDFMIQXXXXXXXXXXX 55
I E++ P T +NF L G+ Y ++FHRVI++FM+Q
Sbjct: 19 IYFELFDNVVPKTVKNFASLCN-GFEKDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTG 77
Query: 56 -QSIYGPHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIFGRVQ 114
+SIYG F+DE +LKH +LSMANAGPNTN SQFFIT PT LDGKH +FG+V
Sbjct: 78 GESIYGEKFEDE-NFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVI 136
Query: 115 NGMTVVKRIGLVECDKNDCPVDDVRIE 141
G + V+ I +E KND PV V IE
Sbjct: 137 QGKSTVRTIENLE-TKNDDPVVPVVIE 162
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 100 bits (239), Expect = 1e-22
Identities = 57/136 (41%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 2 GKIMLEMYWKHAPLTCRNFMELVRRGYYNNTKFHRVIRDFMIQXXXXXXXXXXXQSIYGP 61
G I +E++ K P CRNF++L GYY+ T HRV+ +F+IQ +SIYG
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCLEGYYDGTIVHRVVPEFLIQGGDPTGTGMGGESIYGE 81
Query: 62 HFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIFGRVQNGMTV-- 119
F E L+ G++ MA N SQFFITL PT +GK T+FGRV G T+
Sbjct: 82 PFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVV-GDTIYN 140
Query: 120 VKRIGLVECDKNDCPV 135
V RI +E D N PV
Sbjct: 141 VVRISELELDANQRPV 156
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 86.2 bits (204), Expect = 2e-18
Identities = 56/152 (36%), Positives = 74/152 (48%), Gaps = 14/152 (9%)
Query: 1 MGKIMLEMYWKHAPLTCRNFMELVRR----------GYYNNTKFHRVIRDFMIQXXXXXX 50
+G+I + ++ P T NF + GY N+T FHR+I+ FMIQ
Sbjct: 18 LGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNST-FHRIIQGFMIQGGDFVS 76
Query: 51 XXXXXQS-IYGPH-FKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHT 108
+ I+ F DE LKH G+LSMANAG ++N QFFIT P +LDGKH
Sbjct: 77 GDGTGSATIFNSRTFPDE-NFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHV 135
Query: 109 IFGRVQNGMTVVKRIGLVECDKNDCPVDDVRI 140
+FG V G +VK I N P +V I
Sbjct: 136 VFGEVIEGYDIVKEIESTPVGANSRPKSNVAI 167
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 64.5 bits (150), Expect = 6e-12
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 15/160 (9%)
Query: 1 MGKIMLEMYWKHAPLTCRNFMELVRRGYYNNTKFHRVIRDFMIQXXX-XXXXXXXXQSIY 59
+G ++++++ K AP TC NF++L + YYN F+ + ++ Q + ++
Sbjct: 9 VGDLVIDLFVKEAPKTCENFLKLCKLKYYNFCPFYNIQHNYTCQTGDPLGPTGDGGRCVW 68
Query: 60 G------PHFKDEITSDLKHAGAGILSMANAGPNTN-------ASQFFITLAPT-QWLDG 105
FK E L H G++SM+ A ++ SQF ITL+ + LD
Sbjct: 69 NVLNKGTRFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDNLEGLDE 128
Query: 106 KHTIFGRVQNGMTVVKRIGLVECDKNDCPVDDVRIERAYI 145
++ I+G+V G + +I CD+ P D+RI+ I
Sbjct: 129 RYPIYGQVAEGFDTLLKINDAICDEEGQPYRDIRIKHTII 168
>SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 791
Score = 25.4 bits (53), Expect = 3.6
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 62 HFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAP 99
H + ++ H+ A S NA PNT A T P
Sbjct: 732 HKNNNASNTFSHSNASTSSSLNAAPNTTAKSSSQTAPP 769
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1778
Score = 25.0 bits (52), Expect = 4.7
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 61 PHFKDEITSDLKHAGAGILSMANAGPNTNAS 91
P F T+ K AG G+ AG NTN +
Sbjct: 476 PAFGSTATTAPKPAGTGLFGGLGAGANTNTA 506
>SPBC354.13 |rga6||GTPase activating protein
Rga6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 733
Score = 24.6 bits (51), Expect = 6.2
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 77 GILSMANAGPNTNASQFFITLAPTQWLDGKHTIFGRV 113
GI ++ +GP A + P WLD IF R+
Sbjct: 351 GIFRISGSGPVIKAITEYFYSPPHFWLDETSEIFKRI 387
>SPAC3G6.09c |tps2||trehalose-phosphate synthase Tps2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 849
Score = 24.2 bits (50), Expect = 8.2
Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 92 QFFITLAPTQWLDGK-HTIFGRVQNGMTVVKRIGLVECDKN 131
Q+++ P +++ K H+I QN T + +EC N
Sbjct: 676 QYYVERTPGSYIEEKKHSISWCYQNANTTYSKFQSLECQTN 716
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.325 0.140 0.441
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 655,277
Number of Sequences: 5004
Number of extensions: 22848
Number of successful extensions: 68
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 50
Number of HSP's gapped (non-prelim): 13
length of query: 147
length of database: 2,362,478
effective HSP length: 67
effective length of query: 80
effective length of database: 2,027,210
effective search space: 162176800
effective search space used: 162176800
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 50 (24.2 bits)
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