Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002151-TA|BGIBMGA002151-PA|IPR002130|Peptidyl-prolyl
cis-trans isomerase, cyclophilin type
(147 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 192 1e-49
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 151 2e-37
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 128 1e-30
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 124 2e-29
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 120 3e-28
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 118 1e-27
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 116 9e-27
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 114 2e-26
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 111 2e-25
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 109 7e-25
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 109 1e-24
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 107 2e-24
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 107 3e-24
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 107 4e-24
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 106 5e-24
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 105 9e-24
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 104 2e-23
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 103 5e-23
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 96 7e-21
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 96 7e-21
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 86 8e-18
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 59 1e-09
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 56 7e-09
At1g26940.1 68414.m03284 peptidyl-prolyl cis-trans isomerase cyc... 45 2e-05
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 40 7e-04
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 37 0.005
At3g01480.1 68416.m00072 peptidyl-prolyl cis-trans isomerase, pu... 29 1.3
At4g32920.1 68417.m04685 glycine-rich protein 28 2.9
At2g29760.1 68415.m03616 pentatricopeptide (PPR) repeat-containi... 27 3.9
At5g17360.1 68418.m02034 expressed protein 27 5.1
At3g15520.1 68416.m01967 peptidyl-prolyl cis-trans isomerase TLP... 27 5.1
At1g06440.1 68414.m00682 expressed protein 26 9.0
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 192 bits (467), Expect = 1e-49
Identities = 86/145 (59%), Positives = 106/145 (73%)
Query: 1 MGKIMLEMYWKHAPLTCRNFMELVRRGYYNNTKFHRVIRDFMIQXXXXXXXXXXXQSIYG 60
MG +EMY+KH+P TCRNF+EL RRGYY+N FHR+++DF++Q +SIYG
Sbjct: 18 MGPFTVEMYYKHSPRTCRNFLELSRRGYYDNVLFHRIVKDFIVQGGDPTGTGRGGESIYG 77
Query: 61 PHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIFGRVQNGMTVV 120
F+DEI +LKH GAGILSMANAGPNTN SQFFITLAP LDGKHTIFGRV GM V+
Sbjct: 78 SKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAPQPSLDGKHTIFGRVCRGMEVI 137
Query: 121 KRIGLVECDKNDCPVDDVRIERAYI 145
KR+G V+ D D P+ +V+I R +
Sbjct: 138 KRLGSVQTDNTDRPIHEVKILRTKV 162
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 151 bits (365), Expect = 2e-37
Identities = 75/147 (51%), Positives = 89/147 (60%)
Query: 1 MGKIMLEMYWKHAPLTCRNFMELVRRGYYNNTKFHRVIRDFMIQXXXXXXXXXXXQSIYG 60
+G I +++Y + P T NF R GYY+N FHRVIR FMIQ QSI+G
Sbjct: 484 LGDIHMKLYPEECPKTVENFTTHCRNGYYDNHLFHRVIRGFMIQTGDPLGDGTGGQSIWG 543
Query: 61 PHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIFGRVQNGMTVV 120
F+DE L+H LSMANAGPNTN SQFFIT T WLD KHT+FGRV GM VV
Sbjct: 544 REFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVV 603
Query: 121 KRIGLVECDKNDCPVDDVRIERAYIPK 147
+ I V+ DKND P DV+I +PK
Sbjct: 604 QGIEKVKTDKNDRPYQDVKILNVTVPK 630
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 128 bits (309), Expect = 1e-30
Identities = 60/144 (41%), Positives = 87/144 (60%)
Query: 2 GKIMLEMYWKHAPLTCRNFMELVRRGYYNNTKFHRVIRDFMIQXXXXXXXXXXXQSIYGP 61
G + +E++ AP C NF+ L RGYYN FHR IR+FMIQ +SI+G
Sbjct: 353 GDLNIELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQGGDPTGTGKGGESIWGK 412
Query: 62 HFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIFGRVQNGMTVVK 121
FKDE S L H+G G++SMAN+GP+TN SQFF+ L+ KHT+FG V G+ +
Sbjct: 413 PFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLA 472
Query: 122 RIGLVECDKNDCPVDDVRIERAYI 145
+ V D++D P+++++I A +
Sbjct: 473 AMENVPVDESDRPLEEIKIIEASV 496
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 124 bits (299), Expect = 2e-29
Identities = 67/137 (48%), Positives = 81/137 (59%), Gaps = 5/137 (3%)
Query: 2 GKIMLEMYWKHAPLTCRNFMELV--RRGY-YNNTKFHRVIRDFMIQXXXXXXXXXXX-QS 57
G+I++ +Y P T NF L +G+ Y + FHRVIRDFMIQ +S
Sbjct: 107 GRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIRDFMIQGGDFEKGNGTGGKS 166
Query: 58 IYGPHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIFGRVQNGM 117
+YG FKDE L H G G+LSMANAGPNTN SQFFI T WLDG+H +FG+V GM
Sbjct: 167 VYGRTFKDE-NFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEGM 225
Query: 118 TVVKRIGLVECDKNDCP 134
VVK I E D+ D P
Sbjct: 226 EVVKLIEEQETDRGDRP 242
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 120 bits (290), Expect = 3e-28
Identities = 61/145 (42%), Positives = 82/145 (56%)
Query: 1 MGKIMLEMYWKHAPLTCRNFMELVRRGYYNNTKFHRVIRDFMIQXXXXXXXXXXXQSIYG 60
+G I E++ P + NF+ L GYY+ T FHR I+ FMIQ SI+G
Sbjct: 9 LGDIKCEIFCDEVPKSAENFLALCASGYYDGTIFHRNIKGFMIQGGDPKGTGKGGTSIWG 68
Query: 61 PHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIFGRVQNGMTVV 120
F DEI LKH G+LSMAN+GPNTN SQFFIT A L+G +TIFG+V +G V+
Sbjct: 69 KKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAKQPHLNGLYTIFGKVIHGFEVL 128
Query: 121 KRIGLVECDKNDCPVDDVRIERAYI 145
+ + D P+ ++R+ R I
Sbjct: 129 DIMEKTQTGPGDRPLAEIRLNRVTI 153
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 118 bits (285), Expect = 1e-27
Identities = 62/137 (45%), Positives = 85/137 (62%), Gaps = 2/137 (1%)
Query: 2 GKIMLEMYWKHAPLTCRNFMELVRRGYYNNTKFHRVIRDFMIQXXXXXXXXXXXQSIYGP 61
G I +E++ K AP + RNF++L GY++NT FHRVI F++Q SIYG
Sbjct: 22 GPIDVELWPKEAPKSVRNFVQLCLEGYFDNTIFHRVIPGFLVQGGDPTGSGTGGDSIYGG 81
Query: 62 HFKDEITSDLKHAGAGILSMANA-GPNTNASQFFITLAPTQWLDGKHTIFGRVQ-NGMTV 119
F DE S L+ + GI++MANA PN+N SQFF TL WLD KHTIFG+V + +
Sbjct: 82 VFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFTLDKCDWLDKKHTIFGKVTGDSIYN 141
Query: 120 VKRIGLVECDKNDCPVD 136
+ R+G V+ K+D P+D
Sbjct: 142 LLRLGEVDTSKDDRPLD 158
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 116 bits (278), Expect = 9e-27
Identities = 68/151 (45%), Positives = 84/151 (55%), Gaps = 13/151 (8%)
Query: 2 GKIMLEMYWKHAPLTCRNFMELV--RRG---------YYNNTKFHRVIRDFMIQXXXXXX 50
G+I++E+Y P T NF L +G +Y +FHRVI+ FMIQ
Sbjct: 18 GRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRVIKGFMIQGGDISA 77
Query: 51 XXXXX-QSIYGPHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTI 109
+SIYG F DE +LKH G+LSMAN+GPNTN SQFFIT T LDGKH +
Sbjct: 78 NDGTGGESIYGLKFDDE-NFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVV 136
Query: 110 FGRVQNGMTVVKRIGLVECDKNDCPVDDVRI 140
FGRV GM VV+ I V ++ CP DV I
Sbjct: 137 FGRVTKGMGVVRSIEHVSIEEQSCPSQDVVI 167
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 114 bits (275), Expect = 2e-26
Identities = 63/143 (44%), Positives = 80/143 (55%), Gaps = 5/143 (3%)
Query: 2 GKIMLEMYWKHAPLTCRNFMELV---RRGYYNNTKFHRVIRDFMIQXXXXXXXXXXXQ-S 57
G+I++ ++ + P T NF L ++ Y + FHR+I+DFMIQ S
Sbjct: 109 GRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGIS 168
Query: 58 IYGPHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIFGRVQNGM 117
IYG F+DE LKH G GILSMANAGPNTN SQFFI T WLD KH +FG+V GM
Sbjct: 169 IYGAKFEDE-NFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGM 227
Query: 118 TVVKRIGLVECDKNDCPVDDVRI 140
+V+ + E D P RI
Sbjct: 228 KLVRTLESQETRAFDVPKKGCRI 250
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 111 bits (267), Expect = 2e-25
Identities = 57/153 (37%), Positives = 84/153 (54%), Gaps = 8/153 (5%)
Query: 1 MGKIMLEMYWKHAPLTCRNFMELVRRGYYNNTKFHRVIRDFMIQXXXXXXXXXXXQSIY- 59
+G I+++++ PLTC+NF++L + YYN FH V +DF Q SIY
Sbjct: 9 LGDIVIDLHSDKCPLTCKNFLKLCKIKYYNGCLFHTVQKDFTAQTGDPTGTGAGGDSIYK 68
Query: 60 ------GPHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLA-PTQWLDGKHTIFGR 112
+KDEI DLKH+ G ++MA+ G N NASQF+ TL +LDGKHT+FG+
Sbjct: 69 FLYGEQARFYKDEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDDLDYLDGKHTVFGQ 128
Query: 113 VQNGMTVVKRIGLVECDKNDCPVDDVRIERAYI 145
+ G + RI D + P ++RI+ +I
Sbjct: 129 IAEGFDTLTRINEAYVDPKNRPYKNIRIKHTHI 161
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 109 bits (262), Expect = 7e-25
Identities = 61/133 (45%), Positives = 76/133 (57%), Gaps = 12/133 (9%)
Query: 2 GKIMLEMYWKHAPLTCRNFMELV--RRG--------YYNNTKFHRVIRDFMIQXXXXXXX 51
G+I++E+Y P T NF L +G ++ +KFHRVI +FM Q
Sbjct: 18 GRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAG 77
Query: 52 XXXX-QSIYGPHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIF 110
+SIYG F+DE + KH G GILSMANAG NTN SQFFI T WLDGKH +F
Sbjct: 78 NGTGGESIYGSKFEDE-NFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVF 136
Query: 111 GRVQNGMTVVKRI 123
G+V G+ VVK I
Sbjct: 137 GQVVEGLDVVKAI 149
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 109 bits (261), Expect = 1e-24
Identities = 62/133 (46%), Positives = 75/133 (56%), Gaps = 12/133 (9%)
Query: 2 GKIMLEMYWKHAPLTCRNFMELV-------RRG---YYNNTKFHRVIRDFMIQXXXXXXX 51
GKI++E+Y P T NF L R G ++ + FHRVI +FM Q
Sbjct: 19 GKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKG 78
Query: 52 XXXX-QSIYGPHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIF 110
+SIYG F+DE + KH G GILSMANAG NTN SQFFI T WLDGKH +F
Sbjct: 79 NGTGGESIYGAKFEDE-NFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVF 137
Query: 111 GRVQNGMTVVKRI 123
G+V G+ VVK I
Sbjct: 138 GQVVEGLDVVKAI 150
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 107 bits (258), Expect = 2e-24
Identities = 63/143 (44%), Positives = 81/143 (56%), Gaps = 11/143 (7%)
Query: 2 GKIMLEMYWKHAPLTCRNFM-----ELVRRGY---YNNTKFHRVIRDFMIQXXXXXXXXX 53
G+I +E++ AP T NF EL + G Y +FHRVI+DFM+Q
Sbjct: 46 GRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKECQFHRVIKDFMVQSGDFLKNDG 105
Query: 54 XX-QSIYGPHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIFGR 112
SIYG F+DE KH G G+LSMAN+GPNTN QFFIT A WLD KH +FGR
Sbjct: 106 SGCMSIYGHKFEDE-NFTAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFGR 164
Query: 113 V-QNGMTVVKRIGLVECDKNDCP 134
V +G+ V+++I V N+ P
Sbjct: 165 VLGDGLLVMRKIENVAIGPNNRP 187
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 107 bits (257), Expect = 3e-24
Identities = 64/139 (46%), Positives = 75/139 (53%), Gaps = 12/139 (8%)
Query: 2 GKIMLEMYWKHAPLTCRNFMELV--RRG--------YYNNTKFHRVIRDFMIQXXXXXXX 51
G+I++E+Y P T NF L RG +Y + FHRVI FM Q
Sbjct: 19 GRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVIPKFMCQGGDFTAG 78
Query: 52 XXXX-QSIYGPHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIF 110
+SIYG FKDE KH G GILSMANAG NTN SQFFI T WLDGKH +F
Sbjct: 79 NGTGGESIYGSKFKDE-NFIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVF 137
Query: 111 GRVQNGMTVVKRIGLVECD 129
G+V G+ VV+ I V D
Sbjct: 138 GQVVEGLNVVRDIEKVGSD 156
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 107 bits (256), Expect = 4e-24
Identities = 64/151 (42%), Positives = 83/151 (54%), Gaps = 13/151 (8%)
Query: 2 GKIMLEMYWKHAPLTCRNFMELV-------RRG---YYNNTKFHRVIRDFMIQXXXXXXX 51
G++++E++ P T NF L + G +Y + FHR+I FM Q
Sbjct: 18 GRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRIIPGFMCQGGDFTRG 77
Query: 52 XXXX-QSIYGPHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIF 110
+SIYG F+DE LKH G GILSMAN+GPNTN SQFFI T WLDGKH +F
Sbjct: 78 NGTGGESIYGSKFEDE-NFKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGKHVVF 136
Query: 111 GRVQNGMTVVKRIGLVECDKNDCPVDDVRIE 141
G+V +G VVK + V D + P + V IE
Sbjct: 137 GKVVDGYNVVKAMEDVGSDMGN-PSERVVIE 166
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 106 bits (255), Expect = 5e-24
Identities = 58/133 (43%), Positives = 76/133 (57%), Gaps = 12/133 (9%)
Query: 2 GKIMLEMYWKHAPLTCRNFMELV--RRG--------YYNNTKFHRVIRDFMIQXXXXXXX 51
G++++ ++ K P T NF L +G +Y +KFHR+I FMIQ
Sbjct: 46 GRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHG 105
Query: 52 XXXX-QSIYGPHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIF 110
+SIYG F DE LKH G G+LSMAN+G +TN SQFFIT T WLDG+H +F
Sbjct: 106 NGMGGESIYGQKFADE-NFKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVF 164
Query: 111 GRVQNGMTVVKRI 123
G+V GM VV +I
Sbjct: 165 GKVVQGMDVVYKI 177
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 105 bits (253), Expect = 9e-24
Identities = 63/140 (45%), Positives = 77/140 (55%), Gaps = 12/140 (8%)
Query: 1 MGKIMLEMYWKHAPLTCRNFMELV--RRG--------YYNNTKFHRVIRDFMIQXXXXXX 50
+G+I +E++ P T NF L +G ++ + FHRVI FM Q
Sbjct: 17 IGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDFTA 76
Query: 51 XXXXX-QSIYGPHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTI 109
+SIYG FKDE KH GAGILSMAN+GPNTN SQFFI T WLDGKH +
Sbjct: 77 KNGTGGESIYGAKFKDE-NFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVV 135
Query: 110 FGRVQNGMTVVKRIGLVECD 129
FG+V G+ VVK I V D
Sbjct: 136 FGQVVKGLDVVKAIEKVGSD 155
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 104 bits (250), Expect = 2e-23
Identities = 57/133 (42%), Positives = 75/133 (56%), Gaps = 12/133 (9%)
Query: 2 GKIMLEMYWKHAPLTCRNFMELV--RRG--------YYNNTKFHRVIRDFMIQXXXXXXX 51
G+I++ ++ P T NF L +G Y+ + FHR+I FMIQ
Sbjct: 73 GRILIGLFGNIVPKTAENFRSLCTGEKGVGNMGKPLYFKGSSFHRIIPGFMIQGGDFTRG 132
Query: 52 XXXX-QSIYGPHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIF 110
+SIYG F DE LKH G G LSMAN+GP++N SQFFIT T WLDG H +F
Sbjct: 133 DGRGGESIYGDKFADE-NFKLKHTGPGFLSMANSGPDSNGSQFFITTVTTSWLDGHHVVF 191
Query: 111 GRVQNGMTVVKRI 123
G+V +GM VV++I
Sbjct: 192 GKVLSGMEVVRKI 204
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 103 bits (247), Expect = 5e-23
Identities = 57/133 (42%), Positives = 74/133 (55%), Gaps = 12/133 (9%)
Query: 2 GKIMLEMYWKHAPLTCRNFMELV-------RRG---YYNNTKFHRVIRDFMIQXXXXXXX 51
G+I++ ++ K P T NF L + G +Y + FHR+I FM+Q
Sbjct: 49 GRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDFTHG 108
Query: 52 XXXX-QSIYGPHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIF 110
+SIYG F DE LKH G G LSMANAG +TN SQFFIT T WLDG+H +F
Sbjct: 109 NGMGGESIYGEKFADE-NFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSWLDGRHVVF 167
Query: 111 GRVQNGMTVVKRI 123
G+V GM VV ++
Sbjct: 168 GKVVTGMDVVYKV 180
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 96.3 bits (229), Expect = 7e-21
Identities = 49/100 (49%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Query: 28 YYNNTKFHRVIRDFMIQXXXXXXXXXXX-QSIYGPHFKDEITSDLKHAGAGILSMANAGP 86
++ + FHRVI+ FM Q +SIYG F DE L H GAG+LSMAN GP
Sbjct: 58 HFKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDE-NFRLDHDGAGVLSMANCGP 116
Query: 87 NTNASQFFITLAPTQWLDGKHTIFGRVQNGMTVVKRIGLV 126
NTN SQFFI LDGKH +FG+V GM V+K++ LV
Sbjct: 117 NTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELV 156
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 96.3 bits (229), Expect = 7e-21
Identities = 49/100 (49%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Query: 28 YYNNTKFHRVIRDFMIQXXXXXXXXXXX-QSIYGPHFKDEITSDLKHAGAGILSMANAGP 86
++ + FHRVI+ FM Q +SIYG F DE L H GAG+LSMAN GP
Sbjct: 58 HFKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDE-NFRLDHDGAGVLSMANCGP 116
Query: 87 NTNASQFFITLAPTQWLDGKHTIFGRVQNGMTVVKRIGLV 126
NTN SQFFI LDGKH +FG+V GM V+K++ LV
Sbjct: 117 NTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELV 156
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 86.2 bits (204), Expect = 8e-18
Identities = 48/128 (37%), Positives = 69/128 (53%), Gaps = 12/128 (9%)
Query: 1 MGKIMLEMYWKHAPLTCRNFMELV--RRG--------YYNNTKFHRVIRDFMIQXXXXXX 50
+G+I++ +Y P T NF L +G +Y T FHR+I F+IQ
Sbjct: 60 LGRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYKGTPFHRIISGFVIQGGDIIH 119
Query: 51 XXX-XXQSIYGPHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTI 109
SIYG F DE ++H+ AG+++MAN GP++N SQFFIT WL+G+H +
Sbjct: 120 GDGKSSDSIYGGTFPDE-NFKIQHSHAGMVAMANTGPDSNGSQFFITTVKASWLEGEHVV 178
Query: 110 FGRVQNGM 117
G+V GM
Sbjct: 179 LGKVIQGM 186
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 59.3 bits (137), Expect = 1e-09
Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 14/151 (9%)
Query: 4 IMLEMYWKHAPLTCRNFMELV--------RRG---YYNNTKFHRVIRDFMIQXXXXXXXX 52
++ E++ + AP T NF L R G +Y + FHR+++ Q
Sbjct: 23 MVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGSFFHRIMKGSSAQAGDFVNRN 82
Query: 53 XXX-QSIYGPHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIFG 111
+SIY F DE + L+H G+LSM+ A + S F IT P Q LD + +FG
Sbjct: 83 GTAGESIYAGKFPDE-SPKLRHEETGLLSMSIADRDKFGSHFHITFRPNQQLDRNNVVFG 141
Query: 112 RVQNGMTVVKRIGLVECDKNDCPVDDVRIER 142
++ G ++K+I V D+ P V+I R
Sbjct: 142 KLIQGKEILKKIERVG-DEEGKPTVSVKIIR 171
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 56.4 bits (130), Expect = 7e-09
Identities = 39/139 (28%), Positives = 59/139 (42%), Gaps = 4/139 (2%)
Query: 2 GKIMLEMYWKHAPLTCRNFMELVRRGYYNNTKFHRVIRDFMIQXXXXXXXXXXXQSIYGP 61
G + +E++ AP FM+ + GY+ F RV++ F+IQ
Sbjct: 87 GSVTIELFKDTAPNVVDQFMKFCQDGYFKGFLFSRVVKHFVIQAGDSAEFDAVKDWALD- 145
Query: 62 HFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIFGRVQNGMTVVK 121
+ I + LKH ++ A +FFI A + L+ K T+FGRV G VV+
Sbjct: 146 --RKNIDTSLKHEEF-MVGTPKAKNEQGGFEFFIVSAQIKDLNEKLTVFGRVSKGQDVVQ 202
Query: 122 RIGLVECDKNDCPVDDVRI 140
I VE D P + I
Sbjct: 203 EIEEVETDDQYQPKSPIEI 221
>At1g26940.1 68414.m03284 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 226
Score = 45.2 bits (102), Expect = 2e-05
Identities = 37/127 (29%), Positives = 53/127 (41%), Gaps = 6/127 (4%)
Query: 2 GKIMLEMYWKHAPLTCRNFMELVRRGYYNNTKFHRVIRDFMIQXXXXXXXXXX-XQSIYG 60
G I Y AP T + +LVR G YN F RV + F+ Q
Sbjct: 41 GDIEFGFYPTVAPKTVDHIFKLVRLGGYNTNHFFRVDKGFVAQVADVASGRSAPMNEEQR 100
Query: 61 PHFKDEIT---SDLKHAGAGILSMAN-AGPNTNASQFFITLAPTQWLDGKHTIFGRVQNG 116
+ +I SD+KH G LSM PN+ S F + L LD ++ +FG+V G
Sbjct: 101 KEAEKKIVGEFSDVKHV-RGTLSMGRYDDPNSAQSSFSMLLGNAPHLDRQYAVFGKVTKG 159
Query: 117 MTVVKRI 123
+ ++
Sbjct: 160 DETLSKL 166
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 39.9 bits (89), Expect = 7e-04
Identities = 36/148 (24%), Positives = 60/148 (40%), Gaps = 22/148 (14%)
Query: 1 MGKIMLEMYWKHAPLTCRNFMELVRRGY--YNNTKFHRVIR-DFMIQXXXXXXXXXXXQS 57
+G+++L +Y +H P+T F + Y NT H++ + + +
Sbjct: 85 LGRVVLGLYGRHVPITVSTFKRMCTSSSTSYKNTPVHKIFPGQYFLAGRQGGGRRDTAEV 144
Query: 58 IYG----PHFKDEITSD---LKHAGAGILSMA----------NAGPNTNASQFFITLAP- 99
Y P D + S L HA AG++S+ P+ +F IT P
Sbjct: 145 GYSLRDLPRNTDVVNSKAFLLPHARAGVVSLCLSENDDDDDIRLDPDYRNVEFLITTGPG 204
Query: 100 -TQWLDGKHTIFGRVQNGMTVVKRIGLV 126
+ LDG + +FG V G+ VV I +
Sbjct: 205 PSPQLDGGNIVFGTVLEGLDVVTSISSI 232
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 37.1 bits (82), Expect = 0.005
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 18/133 (13%)
Query: 2 GKIMLEMYWKHAPLTCRNFMELV--RRG--------YYNNTKFHRVIRDFMIQXXXXXXX 51
G+I++E++ P T NF L RG +Y + F ++ D M
Sbjct: 18 GRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTFDHIVPDLM---WCGGDI 74
Query: 52 XXXXQSIYGPHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPTQW-LDGKHTIF 110
+ I+ DE G GI+SMA++ N SQF I + +DG H +
Sbjct: 75 IFENEPIHSEELDDEYFILNHEDGPGIISMADS----NGSQFQIHMKDYGLQVDGDHVVI 130
Query: 111 GRVQNGMTVVKRI 123
G+V G+ +++ I
Sbjct: 131 GKVVEGLDLMRNI 143
>At3g01480.1 68416.m00072 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase,
chloroplast precursor (40 kDa thylakoid lumen PPIase, 40
kDa thylakoid lumen rotamase) [Spinacia oleracea]
SWISS-PROT:O49939
Length = 437
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Query: 3 KIMLEMYWKHAPLTCRNFMELVRRGYYNNTKFHR 36
+I+L+ Y +AP+T NF++LV R +Y+ + R
Sbjct: 259 RIVLDGY--NAPVTAGNFVDLVERHFYDGMEIQR 290
>At4g32920.1 68417.m04685 glycine-rich protein
Length = 1432
Score = 27.9 bits (59), Expect = 2.9
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 75 GAGILSMANAGPNTNASQFFITLAPTQWLDGKHTIFGRVQNGMTVVKRIGLVECDKNDCP 134
G G+L++ G A + ++L + + + G +QN T L C + DCP
Sbjct: 477 GQGLLNLTGTGDTIEAQRLILSLFYSIQVGAGAVLRGPLQNASTGGLTPKLY-CQRQDCP 535
Query: 135 VD 136
V+
Sbjct: 536 VE 537
>At2g29760.1 68415.m03616 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 738
Score = 27.5 bits (58), Expect = 3.9
Identities = 19/76 (25%), Positives = 31/76 (40%)
Query: 41 FMIQXXXXXXXXXXXQSIYGPHFKDEITSDLKHAGAGILSMANAGPNTNASQFFITLAPT 100
F+I+ QS++G K + SD+ A + I + G +A + F T+
Sbjct: 136 FLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK 195
Query: 101 QWLDGKHTIFGRVQNG 116
+ I G VQ G
Sbjct: 196 DVVSWNSMINGFVQKG 211
>At5g17360.1 68418.m02034 expressed protein
Length = 175
Score = 27.1 bits (57), Expect = 5.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 16 TCRNFMELVRRGYYNNTKFHRVI 38
TCRN +E+V Y + TKF+ +
Sbjct: 50 TCRNIVEIVDNFYEHETKFYEQV 72
>At3g15520.1 68416.m01967 peptidyl-prolyl cis-trans isomerase TLP38,
chloroplast / thylakoid lumen PPIase of 38 kDa /
cyclophilin / rotamase cyclophylin-type; identical to
SP|P82869 Thylakoid lumenal 38 kDa protein, chloroplast
precursor (P38) {Arabidopsis thaliana}
Length = 466
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 13 APLTCRNFMELVRRGYYNNTKFHRV 37
APLT NF +LV G Y+ K + V
Sbjct: 302 APLTAGNFAKLVTSGAYDGAKLNTV 326
>At1g06440.1 68414.m00682 expressed protein
Length = 390
Score = 26.2 bits (55), Expect = 9.0
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 120 VKRIGLVECDKNDCPVDDVRIERAY 144
V++ +VEC K DC VD I+ ++
Sbjct: 212 VEKWRVVECSKEDCSVDRTEIQFSF 236
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.325 0.140 0.441
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,347,992
Number of Sequences: 28952
Number of extensions: 117376
Number of successful extensions: 302
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 238
Number of HSP's gapped (non-prelim): 32
length of query: 147
length of database: 12,070,560
effective HSP length: 75
effective length of query: 72
effective length of database: 9,899,160
effective search space: 712739520
effective search space used: 712739520
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 55 (26.2 bits)
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