Silkworm BLAST Result against rice

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002150-TA|BGIBMGA002150-PA|undefined
         (440 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0211 - 22020515-22020687,22020801-22020831,22022060-220221...    29   9.8  

>03_05_0211 -
           22020515-22020687,22020801-22020831,22022060-22022169,
           22022715-22023102,22023344-22023397,22023739-22023849,
           22023956-22024015,22024618-22024694,22026155-22026188,
           22026267-22027235
          Length = 668

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 20/86 (23%), Positives = 35/86 (40%), Gaps = 8/86 (9%)

Query: 162 DWDIEEINTSNEHIVTENGNSDLSNEHDIINGSNKPSDXXXXXXXXXXXKH--------D 213
           D DI+E       +  EN N++  N+    NG+  PSD           K         +
Sbjct: 21  DNDIKEKAGKGNEVAVENKNAEEQNKGGSENGTKGPSDGDVEMAEAETAKESDVKQLDTE 80

Query: 214 NAASELENEVDDSEQINIKSLESKEL 239
           +A  +   + D +E+ N K  E +++
Sbjct: 81  DAKKDGAQDADANEEKNTKDTEGEDV 106


  Database: rice
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.311    0.129    0.358 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,407,258
Number of Sequences: 37544
Number of extensions: 314998
Number of successful extensions: 596
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 596
Number of HSP's gapped (non-prelim): 2
length of query: 440
length of database: 14,793,348
effective HSP length: 84
effective length of query: 356
effective length of database: 11,639,652
effective search space: 4143716112
effective search space used: 4143716112
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 61 (28.7 bits)