Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002150-TA|BGIBMGA002150-PA|undefined
(440 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35263| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.15
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 34 0.20
SB_5745| Best HMM Match : Extensin_2 (HMM E-Value=0.43) 34 0.26
SB_15137| Best HMM Match : SRCR (HMM E-Value=4.9e-28) 33 0.61
SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4) 33 0.61
SB_53464| Best HMM Match : HET (HMM E-Value=1.9) 32 1.1
SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6) 32 1.1
SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.5
SB_48031| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.5
SB_46673| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.5
SB_14169| Best HMM Match : YTH (HMM E-Value=0.00023) 30 3.2
SB_56788| Best HMM Match : 7tm_1 (HMM E-Value=4e-32) 30 4.3
SB_27229| Best HMM Match : 7tm_1 (HMM E-Value=0.0014) 30 4.3
SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7) 30 4.3
SB_25374| Best HMM Match : DUF1087 (HMM E-Value=3.2) 29 5.7
SB_46013| Best HMM Match : DUF1129 (HMM E-Value=0.23) 29 7.5
SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.5
SB_35674| Best HMM Match : SH2 (HMM E-Value=0) 29 7.5
SB_52594| Best HMM Match : ShTK (HMM E-Value=1e-06) 29 9.9
SB_19570| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.9
>SB_35263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 34.7 bits (76), Expect = 0.15
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 154 NRKTSNSGDWDIEEINTSNEHIVTENGNSDLSNEHDIINGS--NKPSDXXXXXXXXXXXK 211
N TS++ + + NTS+ + ++N NSD +N D N S N SD
Sbjct: 137 NNNTSDNNNTS-DNNNTSDNNNTSDNNNSDNNNTSDNNNTSDNNNISDNNNTSDNNNTSD 195
Query: 212 HDNAASELENEVDDSEQINIKSLESKELPTHKIKDYNNISD 252
++N + ++ ++S+ NI ++ + + D NN SD
Sbjct: 196 NNNISDNNNSDNNNSDNNNIS--DNNNIIDNNNSDNNNTSD 234
Score = 29.1 bits (62), Expect = 7.5
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 154 NRKTSNSGDWDIEEINTSNEHIVTENGNSDLSNEHDIIN-GSNKPSDXXXXXXXXXXXKH 212
N TS++ + + NTS+ + +++N NSD +N D N N SD
Sbjct: 235 NNNTSDNNNIS-DNNNTSDNNNISDNNNSDNNNTSDNNNISDNNNSDNNNTSDNNNTS-- 291
Query: 213 DNAASELENEVDDSEQ 228
DN S+ N D+ Q
Sbjct: 292 DNNNSDNNNTSDNKHQ 307
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 34.3 bits (75), Expect = 0.20
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 154 NRKTSNSGDWDIEEINTSNEHIVTENGNSDLSNEHDIINGSNKPSDXXXXXXXXXXXKHD 213
N + NS + N+S+++ ++N NSD SN + + ++ P + D
Sbjct: 77 NSNSDNSNTDNSNSDNSSSDNSSSDNSNSDNSNTDNSTSNNSNPENSTSDNSNSNNSNQD 136
Query: 214 NAASELENEVDDSEQINIKS 233
N+ S+ +++ D+S N S
Sbjct: 137 NSNSD-DSKPDNSNTNNSNS 155
Score = 32.3 bits (70), Expect = 0.80
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 154 NRKTSNSGDWDIEEINTSNEHIVTENGNSDLSNEHDIINGSNKPSDXXXXXXXXXXXKHD 213
N+ SNS D + NT+N + ++N N+D SN + + ++ P + D
Sbjct: 134 NQDNSNSDDSKPDNSNTNNSN--SDNSNTDNSNSDNSTSDNSNPDNLTSDNSNTDNSGSD 191
Query: 214 NAASELENEVDDSEQINIKS 233
N++S N D+S N S
Sbjct: 192 NSSSGNFNS-DNSTSDNSTS 210
Score = 32.3 bits (70), Expect = 0.80
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 154 NRKTSNSGDWDIEEINTSNEHIVTENGNSDLSNEHDIINGSNKPSDXXXXXXXXXXXKHD 213
N SNS + + + N+ N ++N NSD SN + + ++ P + D
Sbjct: 265 NPDNSNSDNSNTDNSNSDNSS--SDNSNSDNSNTDNSTSNNSNPENSTSDNSNSNNSNQD 322
Query: 214 NAASELENEVDDSEQINIKS 233
N+ S+ +++ D+S N S
Sbjct: 323 NSNSD-DSKPDNSNTNNSNS 341
Score = 32.3 bits (70), Expect = 0.80
Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Query: 154 NRKTSNSGDWDIEEINTSNEHIVTENGNSDLSNEHDIINGSNKPSDXXXXXXXXXXXKHD 213
N + NS + N++ E+ ++N NS+ SN+ + + +KP + D
Sbjct: 288 NSNSDNSNTDNSTSNNSNPENSTSDNSNSNNSNQDNSNSDDSKPDNSNTNNSNSDNSNSD 347
Query: 214 NAASELENEVD-DSEQINIKSLESKELPTHKIKDYNNISD 252
N+ S+ N + S+ N + S + N+ SD
Sbjct: 348 NSTSDNSNPDNLTSDNPNTDNSGSDNSSSGNFNSDNSTSD 387
Score = 31.5 bits (68), Expect = 1.4
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 154 NRKTSNSGDWDIEEINTSNEHIVTENGNSDLSNEHDIINGSNKPSDXXXXXXXXXXXKHD 213
N + NS + N++ E+ ++N NS+ SN+ + + +KP + D
Sbjct: 102 NSNSDNSNTDNSTSNNSNPENSTSDNSNSNNSNQDNSNSDDSKPDNSNTNNSNSDNSNTD 161
Query: 214 NAASELENEVDDSEQINIKS 233
N+ S+ + D+S N+ S
Sbjct: 162 NSNSD-NSTSDNSNPDNLTS 180
Score = 30.3 bits (65), Expect = 3.2
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 154 NRKTSNSGDWDIEEINTSNEHIVTENGNSDLSNEHDIINGSNKPSDXXXXXXXXXXXKHD 213
N + NS ++ N+++++ ++N NSD SN D N N SD D
Sbjct: 47 NSTSENSNSYNSTSDNSTSDNSTSDNSNSDNSNS-DNSNTDNSNSDNSSS---------D 96
Query: 214 NAASELENEVDDSEQINIKSLESKELPTHKIKDYNN 249
N++S+ N D+S N S S P + D +N
Sbjct: 97 NSSSDNSNS-DNSNTDNSTSNNSN--PENSTSDNSN 129
Score = 29.9 bits (64), Expect = 4.3
Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 154 NRKTSNSGDWDIEEINTSNEHIVTENGNSDLSNEHDIINGSNKPSDXXXXXXXXXXXKHD 213
N + NS + N+++++ T+N NSD S+ + + ++ + +
Sbjct: 62 NSTSDNSTSDNSNSDNSNSDNSNTDNSNSDNSSSDNSSSDNSNSDNSNTDNSTSNNSNPE 121
Query: 214 NAASELENEVDDSEQINIKSLESK 237
N+ S+ N ++S Q N S +SK
Sbjct: 122 NSTSDNSNS-NNSNQDNSNSDDSK 144
Score = 29.5 bits (63), Expect = 5.7
Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 154 NRKTSNSGDWDIEEINTSNEHIVTENGNSDLSNEHDIINGSNKPSDXXXXXXXXXXXKHD 213
N + NS + N++ +++ ++N N+D S + +G+ + D
Sbjct: 338 NSNSDNSNSDNSTSDNSNPDNLTSDNPNTDNSGSDNSSSGNFNSDNSTSDNSNSDNSTSD 397
Query: 214 NAASELENEVDDSEQINIKSLESKE 238
N++S+ N D+S N S SK+
Sbjct: 398 NSSSDNSNS-DNSYTDNSTSDNSKK 421
Score = 28.7 bits (61), Expect = 9.9
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Query: 154 NRKTSNSGDWDIEEINTSNEHIVTENGNSDLSNEHDIINGSNKPSDXXXXXXXXXXXKHD 213
N T NS + N++ +++ ++N N+D S + +G+ + D
Sbjct: 157 NSNTDNSNSDNSTSDNSNPDNLTSDNSNTDNSGSDNSSSGNFNSDNSTSDNSTSDNSNSD 216
Query: 214 NAASELENEVDDSEQIN 230
N+ S+ + D+S N
Sbjct: 217 NSTSD-NSTSDNSNSDN 232
>SB_5745| Best HMM Match : Extensin_2 (HMM E-Value=0.43)
Length = 607
Score = 33.9 bits (74), Expect = 0.26
Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 12/111 (10%)
Query: 154 NRKTSNSGDWDIEEINTSNEHIVTENGN----SDLSNEHDIINGSN------KPSDXXXX 203
N T N D + SN+HI +N N +D SN+H + SN +D
Sbjct: 239 NDHTYNDNSNDHIYNDNSNDHIYNDNSNDHIYNDNSNDHIYNDNSNDHIYNDNSNDHTYN 298
Query: 204 XXXXXXXKHDNAASEL--ENEVDDSEQINIKSLESKELPTHKIKDYNNISD 252
+DN+ + +N D+S+ NI +K+ + KDYN D
Sbjct: 299 DNSNDHIYNDNSNDHIYNDNSNDNSKNKNINLTFTKKFHCREWKDYNGDDD 349
>SB_15137| Best HMM Match : SRCR (HMM E-Value=4.9e-28)
Length = 327
Score = 32.7 bits (71), Expect = 0.61
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 154 NRKTSNSGDWDIEEIN-TSNEHIVTENGNSDLSNEHDIINGSNKPSDXXXXXXXXXXXKH 212
N TSNS + N TSN + T N N+ SN ++ N +N S+
Sbjct: 141 NNSTSNSNNSTRNNNNSTSNSNNSTSNSNNSTSNSNNSSNNNNSTSNSNNSTSNSNNSTR 200
Query: 213 DNAASELEN 221
+N +S N
Sbjct: 201 NNNSSSNNN 209
Score = 28.7 bits (61), Expect = 9.9
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 154 NRKTSNSGDWDIEEINTSNEHIVTENGNSDLSNEHDIINGSN 195
N TSNS + +TSN + T N N+ N + N +N
Sbjct: 169 NNSTSNSNNSSNNNNSTSNSNNSTSNSNNSTRNNNSSSNNNN 210
>SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4)
Length = 323
Score = 32.7 bits (71), Expect = 0.61
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 158 SNSGDWDIEEINTSNEHIVTENGNSDLSNEHDIINGSNKPSDXXXXXXXXXXXKHDNAAS 217
SN D + E + SNE E+ SD SNE D N S+K ++ + D
Sbjct: 92 SNESD-ESNESDKSNES--DESNESDESNESDESNESDKSNESDKSNESDKSNESDKRNE 148
Query: 218 ELENEVDDSEQINIKSLESKE 238
E++ DD + +S ES E
Sbjct: 149 SDESDEDDESNGSDESNESDE 169
Score = 32.3 bits (70), Expect = 0.80
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Query: 154 NRKTSNSGDWDIEEINTSNEHIVTENGNSDLSNEHDIINGSNKPSDXXXXXXXXXXXKHD 213
N ++G + E + SNE E+ SD SNE D NGS++ ++ D
Sbjct: 171 NGSDESNGSDESNESDESNES--DESNESDESNESDESNGSDESNESDESNESDESNGSD 228
Query: 214 NAASELENEVDDSEQINIKSLESKE 238
+ E+ D + +S ES E
Sbjct: 229 ESNESDESNESDESNGSDESYESDE 253
Score = 29.5 bits (63), Expect = 5.7
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Query: 178 ENGNSDLSNEHDIINGSNKPSDXXXXXXXXXXXKHDNA-ASELENEVDDS--EQINIKSL 234
E+ SD SNE D NGS++ + + D + S+ NE D+S + +S
Sbjct: 157 ESNGSDESNESDESNGSDESNGSDESNESDESNESDESNESDESNESDESNGSDESNESD 216
Query: 235 ESKELPTHKIKDYNNISD 252
ES E D +N SD
Sbjct: 217 ESNESDESNGSDESNESD 234
>SB_53464| Best HMM Match : HET (HMM E-Value=1.9)
Length = 251
Score = 31.9 bits (69), Expect = 1.1
Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 157 TSNSGDWDIEEINTSNEHIVTENGN----SDLSNE-HDIINGSNKPSDXXXXXXXXXXXK 211
T NS + EE + SN ++ +D SN+ DI SN+ +D +
Sbjct: 89 TINSAEQKTEESSGSNAQVIGSGAKLYVATDPSNQLGDISKPSNQQNDVDPGNQQNDVNQ 148
Query: 212 HDNAASELENEVDDSEQINIKSLESKELPTHKIKD 246
+ S +N+VD + + + E+K P+++ D
Sbjct: 149 ENVGPSNQQNDVDQGNAVGLSNQENKVDPSNQEND 183
>SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6)
Length = 557
Score = 31.9 bits (69), Expect = 1.1
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 156 KTSNSGDWDIEEINTSNEHIVTENGNSDLSNEHDIINGSNKPSD 199
+++N+ D DI+E+ NE + G SD N+ D +G ++ D
Sbjct: 146 ESNNNEDEDIQEVEDDNEGKENDGGESDEENDDDDEDGDDEGDD 189
>SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 30.7 bits (66), Expect = 2.5
Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Query: 154 NRKTSNSGDWDIEEINTSNEHIVTENGNSDLSNEH-DIINGSNKPSDXXXXXXXXXXXKH 212
N +N D + E IN NE + N+D SNE+ + N N D +
Sbjct: 83 NNNKTNDNDTNDENINDDNEKNTNDKNNNDDSNENTNDDNDKNTNDDNDKKNDDKDKNTN 142
Query: 213 DNAASELENEVDDSEQ 228
D+ +++D Q
Sbjct: 143 DDFDDNTTDDIDKKHQ 158
>SB_48031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 30.7 bits (66), Expect = 2.5
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 157 TSNSGDWDIEEINTSNEHIVTENGNSDLSN----EHDIINGSNKPSDXXXXXXXXXXXKH 212
++N+ + D + NTSN + NG+SD +N + D N SN SD +
Sbjct: 137 SNNTSNGDSDSNNTSNGDSDSSNGDSDSNNTSNGDSDSNNASNGDSDRNNASNGDSDSNN 196
Query: 213 -DNAASELENEVD-DSEQINIKSLES-KELPTHKIKDYNNISD 252
N S+ N + DS+ N + +S ++ +D NN S+
Sbjct: 197 ASNGDSDSNNASNGDSDSNNASNGDSDSNNASNGDRDSNNASN 239
>SB_46673| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 30.7 bits (66), Expect = 2.5
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Query: 154 NRKTSNSGDWDIEEINTSNEHIVTENGNSDLSNEHDIINGSNKPSDXXXXXXXXXXXKHD 213
N + N D + + N + EN NS+ NE+D N SN +D ++D
Sbjct: 31 NNNSDNKNDNNNSDNENDNNNSYNENDNSNSDNEND-NNNSNNEND-----NNNSNNEND 84
Query: 214 NAASELENEVDDSEQINIKSLESKELPT 241
N S E++ ++ I ++ + +PT
Sbjct: 85 NNNSNNESDNNNIISITKTTVNTSTIPT 112
>SB_14169| Best HMM Match : YTH (HMM E-Value=0.00023)
Length = 906
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/61 (24%), Positives = 25/61 (40%)
Query: 162 DWDIEEINTSNEHIVTENGNSDLSNEHDIINGSNKPSDXXXXXXXXXXXKHDNAASELEN 221
DWD+ ++ S+E E N DL E ++ N D +NA +L +
Sbjct: 356 DWDLSNVSVSSEGHQVEACNDDLVRESNVSTEVNPAPDAISVSESIGLISAENAPGKLAH 415
Query: 222 E 222
+
Sbjct: 416 K 416
>SB_56788| Best HMM Match : 7tm_1 (HMM E-Value=4e-32)
Length = 524
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 64 LEIKKIKPRDVAKFAITHTGELKNYLNKPTVDQERVCSRL-LLHKSMQEKYKIIRRRF-A 121
L++ +IKPRD FA + + Y N+P V+ + + + + ++Y ++ F
Sbjct: 14 LDVARIKPRDKIFFAFSVKIHRRLYRNRPEVNWVPIHTNMHTREQRCHDQYNVVAEDFER 73
Query: 122 NIPIRDLFMSR 132
I +R+++ R
Sbjct: 74 GIRLREVYQKR 84
>SB_27229| Best HMM Match : 7tm_1 (HMM E-Value=0.0014)
Length = 309
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 64 LEIKKIKPRDVAKFAITHTGELKNYLNKPTVDQERVCSRL-LLHKSMQEKYKIIRRRF-A 121
L++ +IKPRD FA + + Y N+P V+ + + + + ++Y ++ F
Sbjct: 6 LDVARIKPRDKIFFAFSVKIHRRLYRNRPEVNWVPIHTNMHTREQRCHDQYNVVAEDFER 65
Query: 122 NIPIRDLFMSR 132
I +R+++ R
Sbjct: 66 GIRLREVYQKR 76
>SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7)
Length = 241
Score = 29.9 bits (64), Expect = 4.3
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 376 KSSGRFDNSKPSNFNYKDNDNKKTFGGKNEDVAKKEEK 413
++SG D++KP + + D+KK K ED K ++K
Sbjct: 143 EASGESDDAKPKTKDAEKKDDKKKVDEKKEDEKKDDDK 180
>SB_25374| Best HMM Match : DUF1087 (HMM E-Value=3.2)
Length = 144
Score = 29.5 bits (63), Expect = 5.7
Identities = 21/103 (20%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
Query: 154 NRKTSNSGDWDIEEINTS---NEHIVTENGNSDLSNEHDIINGSNKPSDXXXXXXXXXXX 210
N SNS + + + +N+ +++ ++N NSD SN + + ++
Sbjct: 14 NSDNSNSDNLNSDNLNSDKLKSDNSNSDNSNSDNSNSDKLKSDNSNSEKLNSNNSDSNNS 73
Query: 211 KHDNAASELEN-EVDDSEQINIKSLESKELPTHKIKDYNNISD 252
DN+ S+ N + +S+++ + + + K+K N+ SD
Sbjct: 74 NSDNSNSDNSNSDNSNSDKLKLVNSNPDNSNSDKLKLVNSNSD 116
>SB_46013| Best HMM Match : DUF1129 (HMM E-Value=0.23)
Length = 553
Score = 29.1 bits (62), Expect = 7.5
Identities = 15/71 (21%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 159 NSGDWDIEEINTSNEHIVTENGNSDLSNEHDIINGSN--KPSDXXXXXXXXXXXKHDNAA 216
NS +D + N++ + +N NS N++ I + N +D +DN+
Sbjct: 338 NSSIYDNDNSIYDNDNSINDNDNSINDNDNSINDNDNSINDNDNSINDNDNSINDNDNSI 397
Query: 217 SELENEVDDSE 227
++ +N ++D++
Sbjct: 398 NDNDNSINDND 408
Score = 28.7 bits (61), Expect = 9.9
Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 159 NSGDWDIEEINTS---NEHIVTENGNSDLSNEHDIINGSNKPSDXXXXXXXXXXXKHDNA 215
N D I + + S N++ + +N NS N++ I + N +D +DN
Sbjct: 450 NDNDNSINDNDNSINDNDNSINDNDNSINDNDNSINDNDNSINDNDNSINDNDNSINDND 509
Query: 216 ASELENEVDDSE-QINIKSLESKELPTHKIKD 246
S ++ ++D++ I + S+ + + I D
Sbjct: 510 NSINDSSINDNDSSIYVGSINDSSIYDNSIND 541
>SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1789
Score = 29.1 bits (62), Expect = 7.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 395 DNKKTFGGKNEDVAKKEEKLHPSWEAKKKQS 425
D++K NED+ KK+E + +AKK++S
Sbjct: 1643 DDEKKADDSNEDIGKKDESRDQAEDAKKEES 1673
>SB_35674| Best HMM Match : SH2 (HMM E-Value=0)
Length = 871
Score = 29.1 bits (62), Expect = 7.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 395 DNKKTFGGKNEDVAKKEEKLHPSWEAKKKQS 425
D++K NED+ KK+E + +AKK++S
Sbjct: 222 DDEKKADDSNEDIGKKDESRDQAEDAKKEES 252
>SB_52594| Best HMM Match : ShTK (HMM E-Value=1e-06)
Length = 324
Score = 28.7 bits (61), Expect = 9.9
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 372 DFSTKSSGRFDNSKPSNFNYKDNDNKKTFGGKNEDVAKKEEKLHPSWEAKKKQS 425
DF+ S S + D+ NKK+ G +N V + K P ++ K ++
Sbjct: 96 DFADSSEAVGTESADDVIVHVDSGNKKSMGSRNTGVKSRVNKGEPKYQDKSNEA 149
>SB_19570| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 189
Score = 28.7 bits (61), Expect = 9.9
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 175 IVTENGNSDLSNEHDIINGSNKPSDXXXXXXXXXXXKHDNAASELENEVDDSEQINIKSL 234
IVT + +S + ++H I++G S+ NA+ + + D+ E +NI S
Sbjct: 31 IVTTDSSSSVKHDH-IVDGKTVKSEIEQPVITVKSLVLRNASDVVVSSDDEVEIVNIISA 89
Query: 235 ESKE 238
ESK+
Sbjct: 90 ESKK 93
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.311 0.129 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,603,992
Number of Sequences: 59808
Number of extensions: 400107
Number of successful extensions: 1164
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1041
Number of HSP's gapped (non-prelim): 92
length of query: 440
length of database: 16,821,457
effective HSP length: 84
effective length of query: 356
effective length of database: 11,797,585
effective search space: 4199940260
effective search space used: 4199940260
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 61 (28.7 bits)
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