GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002150-TA|BGIBMGA002150-PA|undefined
         (440 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    25   1.3  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    24   2.2  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    24   2.2  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    23   5.1  
AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin prot...    23   5.1  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    23   5.1  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    23   5.1  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   6.7  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    23   6.7  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 8/82 (9%)

Query: 176 VTENGNSDLSNEHDIINGSNKPSDXXXXXXXXXXXKHD--NAASELENEVDDSEQINIKS 233
           +T  G S +  +  II G NK S              +  NA+S +EN +    Q N + 
Sbjct: 340 ITRTGLSSV-RDSSIICGGNKRSQVFRGRDANRQNSCNIYNASSRMENNLRGETQSNYRE 398

Query: 234 LESKE-LPTHKI----KDYNNI 250
           +E ++ +P + +    KD N I
Sbjct: 399 MEKRQSVPANDLLTTEKDNNEI 420


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 376 KSSGRFDNSKPSNFNYK-DNDNKKTFGGKNEDVAKKEEKLH 415
           K +G   N    N N + DN N +    +N++      KLH
Sbjct: 504 KQNGNRQNDNKRNGNRQNDNQNNQNDNNRNDNQVHHSSKLH 544


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 9/23 (39%), Positives = 15/23 (65%)

Query: 302 DPFFITSTGENYMSVAEPRQPDE 324
           D FFI S G+  +++ +P  P+E
Sbjct: 255 DTFFIISRGQVRVTIKQPDTPEE 277


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 401 GGKNEDVAKKEEKLHPSWEAKKKQSGILPFQGKKIVFDE 439
           G KN  +   + +L P    K+   G    +GKK  FD+
Sbjct: 66  GKKNSIINDVKNELFPEDINKRAPMGFQGMRGKKASFDD 104


>AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin
           protein.
          Length = 124

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 401 GGKNEDVAKKEEKLHPSWEAKKKQSGILPFQGKKIVFDE 439
           G KN  +   + +L P    K+   G    +GKK  FD+
Sbjct: 67  GKKNSIINDVKNELFPEDINKRAPMGFQGMRGKKASFDD 105


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 401 GGKNEDVAKKEEKLHPSWEAKKKQSGILPFQGKKIVFDE 439
           G KN  +   + +L P    K+   G    +GKK  FD+
Sbjct: 66  GKKNSIINDVKNELFPEDINKRAPMGFQGMRGKKASFDD 104


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 401 GGKNEDVAKKEEKLHPSWEAKKKQSGILPFQGKKIVFDE 439
           G KN  +   + +L P    K+   G    +GKK  FD+
Sbjct: 66  GKKNSIINDVKNELFPEDINKRAPMGFQGMRGKKASFDD 104


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 8/45 (17%), Positives = 23/45 (51%)

Query: 381 FDNSKPSNFNYKDNDNKKTFGGKNEDVAKKEEKLHPSWEAKKKQS 425
           FDN   +++N+  N  + +    N++  +  ++ H S ++  + +
Sbjct: 417 FDNQDNNHYNHNHNQARHSSKSDNQNNNQHNDQAHHSSKSNNRHN 461


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)

Query: 160 SGDWDIEEINTSNEHIVTENGNSDLSNE 187
           +G ++++   T  EH   E G  D+SN+
Sbjct: 300 AGKFNLQVRGTRGEHTEAEGGIYDISNK 327


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.311    0.129    0.358 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,161
Number of Sequences: 429
Number of extensions: 3987
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 9
length of query: 440
length of database: 140,377
effective HSP length: 60
effective length of query: 380
effective length of database: 114,637
effective search space: 43562060
effective search space used: 43562060
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 45 (22.2 bits)