GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002149-TA|BGIBMGA002149-PA|IPR000073|Alpha/beta
hydrolase fold-1, IPR004147|ABC-1
         (1091 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    28   0.40 
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    27   0.53 
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       25   2.1  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   8.6  

>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 27.9 bits (59), Expect = 0.40
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 553 HGLRKYVVMNVPNLNPDIEGKVEMDPKLQQEIEELNREFN 592
           H L  +++ N PNLNP ++G    + K  +  +  N + N
Sbjct: 49  HKLVTFILKNPPNLNPAVQGSSLTEGKRSKRSKRPNGDTN 88


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 27.5 bits (58), Expect = 0.53
 Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%)

Query: 901 YFVPDVIDELCAQEVITTELIDGVPLDKLFDASYETRVDIASKIMKLCLREMFVLRCMQT 960
           + +  ++ +LC +   T +LI  + +D   D   E R ++ S  +KL   E+ +  C   
Sbjct: 304 FILAKIVTDLCQEANSTKKLIVKIKID--IDKEDE-RNEVISSALKLSQNELEITACKFF 360

Query: 961 DPNWANFFYNTNTKQVIL 978
             + A  F   +TK++I+
Sbjct: 361 SIDNALLFSANSTKKLIV 378


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 1/73 (1%)

Query: 618 IKMQPEPSRIEKDEVKTEIPKFES-VKPKFETLSNTTQFATQTIPKPVAKKKIRVSLSEN 676
           +K+ P      K   K  I  F   +KPK     + TQF + T    +    I+ +LS  
Sbjct: 230 LKLYPLRKATAKIAAKRLIEDFSGYIKPKCVLSDHGTQFISNTWQNSLRAADIQPTLSSI 289

Query: 677 SKARVVPSSRIGR 689
                 PS R+ R
Sbjct: 290 RHPESNPSERVMR 302


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 628 EKDEVKTEIPKFESVKPKFETLSNTTQFATQTIPKPVAKKKIR 670
           E+ +   E+ K E  KP     ++  QF  +TI +     K+R
Sbjct: 155 EETDKLVEVLKEECYKPFINVNAHVAQFTLKTIAETAMGTKLR 197


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.136    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,465
Number of Sequences: 317
Number of extensions: 10071
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 4
length of query: 1091
length of database: 114,650
effective HSP length: 64
effective length of query: 1027
effective length of database: 94,362
effective search space: 96909774
effective search space used: 96909774
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 48 (23.4 bits)