GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002148-TA|BGIBMGA002148-PA|IPR003593|AAA ATPase,
IPR013602|Dynein heavy chain, N-terminal region 2, IPR011704|ATPase
associated with various cellular activities, AAA-5, IPR004273|Dynein
heavy chain
         (3112 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    27   2.7  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    25   8.2  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 26.6 bits (56), Expect = 2.7
 Identities = 14/48 (29%), Positives = 25/48 (52%)

Query: 383 RFYFKEDTDKTWISVTDVTFTYQNEYLGCTERLVITPLTDRCYITLAQ 430
           +FY+  D+     ++TDV FT Q  +L   E L +  L D+  + + +
Sbjct: 250 QFYYCYDSGFNSDNLTDVYFTLQWAFLQILEILALAYLCDKVQLKIGE 297


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 25.0 bits (52), Expect = 8.2
 Identities = 12/47 (25%), Positives = 27/47 (57%)

Query: 774 WTDGIFSALWRKTLKIKTGENIWLVLDGPVDSIWIENLNSVLDDNKT 820
           W+D I++A+ + ++  + G +I L  +  +D +     +S+L  N+T
Sbjct: 311 WSDRIYAAIHQGSVTDERGRSITLTENEGIDILGNMIESSILSPNRT 357


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.136    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,318
Number of Sequences: 317
Number of extensions: 30117
Number of successful extensions: 41
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38
Number of HSP's gapped (non-prelim): 3
length of query: 3112
length of database: 114,650
effective HSP length: 70
effective length of query: 3042
effective length of database: 92,460
effective search space: 281263320
effective search space used: 281263320
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 52 (25.0 bits)