Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002148-TA|BGIBMGA002148-PA|IPR003593|AAA ATPase,
IPR013602|Dynein heavy chain, N-terminal region 2, IPR011704|ATPase
associated with various cellular activities, AAA-5, IPR004273|Dynein
heavy chain
(3112 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0547 - 4774320-4776089,4776823-4777028,4777563-4777818 36 0.40
12_01_0445 - 3513733-3513819,3514392-3514613,3514730-3514999,351... 35 1.2
12_01_0916 + 8959866-8959958,8960429-8960583,8960676-8961055,896... 34 1.6
04_01_0148 + 1710369-1710531,1711821-1712279,1712769-1712915,171... 34 1.6
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 34 2.1
05_05_0348 + 24271764-24271898,24273055-24273144,24273205-242733... 33 3.7
03_02_0596 + 9714022-9714065,9714799-9714868,9714978-9715883,971... 33 3.7
02_05_0330 - 27996080-27996757,27996836-27997366,27998124-27998303 33 3.7
06_01_0860 - 6514921-6515034,6515125-6515196,6515344-6515400,651... 33 4.9
01_06_1249 - 35714645-35716003,35716700-35716761,35717007-357171... 33 4.9
11_03_0002 - 8850264-8850418,8850645-8851772,8851895-8852399 32 8.5
05_07_0209 + 28420008-28421510 32 8.5
05_06_0096 + 25513535-25514024,25514139-25514236,25514395-255147... 32 8.5
03_03_0168 - 15047383-15047847,15048085-15048192,15048313-150484... 32 8.5
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 32 8.5
02_01_0325 - 2208480-2208674,2208772-2210609,2210980-2211109,221... 32 8.5
02_01_0118 + 870911-871203,872559-872679,872975-873092,873218-87... 32 8.5
>05_01_0547 - 4774320-4776089,4776823-4777028,4777563-4777818
Length = 743
Score = 36.3 bits (80), Expect = 0.40
Identities = 39/180 (21%), Positives = 86/180 (47%), Gaps = 17/180 (9%)
Query: 1844 MASTTFLLQLQNYPKDIINNEMVEHLVPYFEMEDYNMDTAKRVCGDVAGLLSWTKAMAFF 1903
+AS +LQ D+ +N++V + ++ +D K++ L+ K A
Sbjct: 504 LASVRDVLQKTQEKLDVTSNQLVSTMEAREDLNKELLDAYKKLESATDELVRERKINA-- 561
Query: 1904 HSVNKEVLPL-KANLMLQEAR--LKVAMDDLASAERQLEEREMSLRKVKEQYESAVS--- 1957
++N+E+ L + +++ EAR L+ +D++ +++++++E L + + S +S
Sbjct: 562 -TLNRELEALVEQSIVESEARQALQADLDEVTNSQKEVDESTQFLSERLDSANSRISSIE 620
Query: 1958 -EKQQLTDAANVCLRK-------MTAATALINGLGGEKIRWTQQSKDFKEQLGRLVGDVV 2009
EK+ L++A R M A L+ +G E+ + SK +E+L G+++
Sbjct: 621 QEKEMLSEALEQQKRSTMEAQKDMEDAQNLMRMIGTERENFETMSKKLEEELATAKGEIL 680
>12_01_0445 - 3513733-3513819,3514392-3514613,3514730-3514999,
3515033-3517110,3517649-3517976,3519136-3519255,
3519299-3519352,3520115-3520154,3520344-3520411
Length = 1088
Score = 34.7 bits (76), Expect = 1.2
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
Query: 1905 SVNKEVLPLKANLMLQEARLKVAMDDLASAERQLEEREMSLRKVKEQYESAVSEKQQLTD 1964
SVN EV+ L+ + E + A + QLE E R ++ + ESA + ++L D
Sbjct: 836 SVNSEVVELRGMVTALEHEVVKEKTFSAELQMQLEALEAIKRVLESEIESAHQDNRKLND 895
Query: 1965 AANVCLRKMTAATALINGLGGEKIRWTQQSKDFKEQLGRLVGDVVLATG 2013
+ TA + E+ QQ + K ++G+L V L G
Sbjct: 896 KVS----SAVDFTAKEEAMQSERRAMKQQLEAAKMEVGKLTNKVSLLQG 940
>12_01_0916 + 8959866-8959958,8960429-8960583,8960676-8961055,
8961142-8962122,8962699-8962829
Length = 579
Score = 34.3 bits (75), Expect = 1.6
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Query: 965 PEHLHKIYVFVLIWGFGSLFETNDRIKFDGYLKSNFREILELPKHPNNKPFVVFDFYVKQ 1024
P HLH FVL GFG+ ET D KF+ + R + +P + V F
Sbjct: 481 PMHLHGFNFFVLAQGFGNYNETTDPAKFN-LVDPQERNTVAVP----TGGWAVIRFVADN 535
Query: 1025 PGKW 1028
PG W
Sbjct: 536 PGVW 539
>04_01_0148 + 1710369-1710531,1711821-1712279,1712769-1712915,
1713004-1714170,1714378-1714430
Length = 662
Score = 34.3 bits (75), Expect = 1.6
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 2273 QITKTTAE-EVNEKLKVAEVTEKKIIKAREEFRAVAARGSILYFLIVEMSNVNLMYQNSL 2331
QI K E E+NE +AE+ + + R + + V R +L +I E S L+ N +
Sbjct: 565 QIAKEANESEINEMASLAEICLRIRGEERPKMKEVELRLQLLRAMITERSRQELLRNNGI 624
Query: 2332 KQFLTIFDNSITKSTKSNVTEERINIILKYLTHEVWA 2368
++ NS T S +V + +L +L E WA
Sbjct: 625 GP--SVQSNSSTTSVTRSVVLRAVKDLLHFLPLE-WA 658
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 33.9 bits (74), Expect = 2.1
Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 9/151 (5%)
Query: 2193 EISAKTSIIDFTVTMQGLEDQLLGRVILMEKSDLEEERVALFESVMKNQRSMKELESNLL 2252
E S T + D V +Q E +G + + LE+E+ + E + K E N L
Sbjct: 2081 EPSTPTDVEDEEVDLQD-ETSYIGE---FKDAKLEDEKETISEEINKMVAVEVESSVNKL 2136
Query: 2253 CRLTSSEGSLVDDEALIQVLQITKTTAEEVNEKLKVAEVTEK-KIIKAREEFRAVAARGS 2311
C L ++E ++DE + V + K++ +EV V E+T+K +++ A + + + +
Sbjct: 2137 C-LETTENITLEDEKQMGVGHLDKSSGDEV---FSVKELTKKSELVHANLDINNNSEQKA 2192
Query: 2312 ILYFLIVEMSNVNLMYQNSLKQFLTIFDNSI 2342
I +++ L+ +S L + ++
Sbjct: 2193 IQNLQCIKIDEAELVAVDSKSDCLAVHAGNV 2223
>05_05_0348 + 24271764-24271898,24273055-24273144,24273205-24273303,
24273725-24273826,24273912-24274088,24274193-24274398,
24274491-24274575,24274641-24274798,24274873-24274948,
24275117-24275245,24275313-24275457,24275561-24275691,
24276183-24276335,24276447-24276636,24277006-24277139,
24277248-24277406,24277659-24277964,24278040-24278216,
24278446-24278529,24278592-24278822,24278913-24279002,
24279090-24279211,24279293-24279448,24279477-24279635,
24279705-24279765,24280004-24280138,24280384-24280471,
24280548-24280620,24280883-24280994,24281691-24281711
Length = 1327
Score = 33.1 bits (72), Expect = 3.7
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 1923 RLKVAMDDLASAERQLEEREMSLRKVKEQYESAVSE-KQQLTDAANVCLRKMTAATALIN 1981
+LK AMD+L S+E +E + +K+ +++E V +++L D ++ M +
Sbjct: 1007 KLKKAMDELRSSEVDVEYKLQDTKKLAKEWEMKVKAFRKKLDDIQTNLVKHMDQIQK--D 1064
Query: 1982 GLGGEKIRWTQQSKDFKE--QLGRLVGDVVLATGFLSYCGPYNQEFRNSLL 2030
+ EK++ T + F E + + V V L L P +S+L
Sbjct: 1065 AIDHEKLKETLSDEQFNEACDMRKAVEMVALLEALLKDLSPNLDSIADSIL 1115
>03_02_0596 + 9714022-9714065,9714799-9714868,9714978-9715883,
9715973-9716146,9716260-9716373,9716975-9717033,
9717170-9717236,9717305-9717356,9718070-9718488,
9718786-9718847,9719305-9719374,9719730-9719831,
9719933-9720063,9720492-9720606,9720792-9720827
Length = 806
Score = 33.1 bits (72), Expect = 3.7
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 1897 TKAMAFFHSVNKEVLPLKANLMLQEARLKVAMDDLASAERQLEEREMSLRKVKEQYESAV 1956
T M N+ +L K L+ E KVA D +AER +++ + + ++E+Y++A+
Sbjct: 662 TALMEMVKQDNRHMLSAKV-LIRMEQEQKVAEDARIAAERDAADKKYAAQLLQEKYDAAM 720
Query: 1957 SEKQQLTDAANVCLRKMTAAT 1977
+ +Q+ A V M AT
Sbjct: 721 AALRQMEKRA-VMAETMLEAT 740
>02_05_0330 - 27996080-27996757,27996836-27997366,27998124-27998303
Length = 462
Score = 33.1 bits (72), Expect = 3.7
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 724 GPPGAGKTTCIHTLMSALSEIENPHREMRMNPKAITAAQMFGRLDVATNDWTDGIFSALW 783
GPPG GKT I TL+ A+ ++N HR + P ++ R+ D + G A +
Sbjct: 292 GPPGTGKTKTISTLLWAML-VKN-HRTLTCAPTNTAVVEVASRVLNLLEDPSAGSGKACF 349
Query: 784 RKTLKIKTGENIWLVLDGPVDSIWIENLNSVLDDNKTLTLANGDRLTMSPTSKVLFEP 841
+ + G + +DG + I++E L K L+ +G ++S ++L +P
Sbjct: 350 LSDV-VLFGNEDRMNVDGNLTKIFLEKRARRL--QKCLSPGSGWVHSLSSMIRILEQP 404
>06_01_0860 -
6514921-6515034,6515125-6515196,6515344-6515400,
6515512-6515650,6515737-6515921,6516043-6516126,
6516552-6516674,6518043-6518219,6518331-6518400,
6518478-6518574,6519022-6519097,6519240-6519329,
6519548-6519655,6520715-6520756,6520854-6521045,
6521239-6521309,6521396-6521550,6521999-6522064,
6522769-6522820,6523476-6523566,6523897-6524094,
6524173-6524267,6524361-6524485,6524586-6525016
Length = 969
Score = 32.7 bits (71), Expect = 4.9
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 657 DEDEPLFISLVADLFPNQMLEKTTYIELEEAIKKQVDLSGLINHPPWILKIIQLYETQRV 716
DE E FIS V PN++ K I E +KK +D L+ P ++ R
Sbjct: 658 DEFERNFISAVVP--PNEIGVKFDDIGALEDVKKTLD--ELVTLPMRRPELFSHGNLLRP 713
Query: 717 RHGIMTLGPPGAGKT 731
GI+ GPPG GKT
Sbjct: 714 CKGILLFGPPGTGKT 728
>01_06_1249 - 35714645-35716003,35716700-35716761,35717007-35717181,
35717276-35717301,35717917-35717983,35719803-35719945,
35720337-35720349
Length = 614
Score = 32.7 bits (71), Expect = 4.9
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 1898 KAMAFFHSVNKEVLPLKANLMLQEARLKVAMDDLASAERQLEEREMSLRKVKEQYESAVS 1957
K A S EV+ LKA+L +++ L+ A+D A +L+ + ++KEQ + A+
Sbjct: 440 KLAAALESTKSEVIFLKASLFDKDSELRRALD----ANEKLQSETRTDNELKEQLQGALL 495
Query: 1958 EKQQL 1962
E QL
Sbjct: 496 ENGQL 500
>11_03_0002 - 8850264-8850418,8850645-8851772,8851895-8852399
Length = 595
Score = 31.9 bits (69), Expect = 8.5
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Query: 965 PEHLHKIYVFVLIWGFGSLFETNDRIKFDGYLKSNFREILELPKHPNNKPFVVFDFYVKQ 1024
P HLH VFVL G G+ D KF+ Y R +++P+ + F
Sbjct: 489 PMHLHGYDVFVLAQGLGNFDPKRDVEKFN-YHNPQLRNTVQVPR----GGWAAVRFLADN 543
Query: 1025 PGKWEL 1030
PG W L
Sbjct: 544 PGMWYL 549
>05_07_0209 + 28420008-28421510
Length = 500
Score = 31.9 bits (69), Expect = 8.5
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 410 GCTERLVIT-PLTDRC-YITLAQALAMSMGGAP------CGPAGTGKTETVKDMGKTLAK 461
GC VI LTD + +L QALA+ GG P GP G + ++D+G LA+
Sbjct: 181 GCNSVHVIDFALTDGIQWPSLIQALAVRPGGPPFLRITGIGPHAAGNRDELRDVGLRLAE 240
Query: 462 YVVVFNCSDQMDYRGL 477
+ +CS +RG+
Sbjct: 241 F--ARSCSVPFAFRGI 254
>05_06_0096 + 25513535-25514024,25514139-25514236,25514395-25514783,
25515485-25515599,25515816-25515917,25516584-25516734,
25517162-25517250,25517518-25517566,25517723-25517763,
25517929-25518116,25518285-25518402,25518900-25519079,
25519172-25519294,25519368-25519455,25519549-25519679,
25519768-25519866,25520822-25521253
Length = 960
Score = 31.9 bits (69), Expect = 8.5
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 3028 EGASLDRKSGKLIESKPKVLYEQMPVIYIFAINTTAGKDPRLYEC--PIYRKPQRTDAKY 3085
+GA++DR G+++ SK + P+ Y+ I GKD +Y P Y +
Sbjct: 784 KGAAIDRILGEIVHSKSMI----TPIDYVLCIGHFLGKDEDIYVFFDPEYPSESKVKPDS 839
Query: 3086 VGSIDFETDSNPR 3098
GS+ + N R
Sbjct: 840 SGSVSLDRRPNGR 852
>03_03_0168 - 15047383-15047847,15048085-15048192,15048313-15048464,
15048555-15048752,15049553-15050856,15051281-15051354,
15051458-15051492,15052853-15053015
Length = 832
Score = 31.9 bits (69), Expect = 8.5
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 2207 MQGLEDQLLGRVILMEKSDLEEERVAL-FESVMKNQRSMKELESNLLCRLTSSEGSLVDD 2265
++GL+D+L+ R+ +S+ EEE E+V N + + E + + T+ + V
Sbjct: 112 VKGLKDELVRRLFESIQSEKEEEEEEQDNETVEVNPAANQASEIQSVSQETTVSITEVHK 171
Query: 2266 EALIQVLQITKTTAEEVNEKLKVAEVTEKKIIKA 2299
E ++QV Q EV++ L V+ E + A
Sbjct: 172 ETVVQVTQEATPPITEVSQSLTVSAAEEPPKVNA 205
>02_05_0484 - 29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 31.9 bits (69), Expect = 8.5
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 1906 VNKEVLPLKANLMLQEARLKVAMDDL-ASAERQLEEREMSLRKVKEQYESAVSEKQQLTD 1964
+ +E L+ NL L L++ M+ AS ER+LEE+E L + + E+ + +L +
Sbjct: 587 LKRERADLQRNLQLHRHELEMEMEKKQASKERELEEKENELNRKMDFVENELKRAAELNE 646
Query: 1965 A 1965
+
Sbjct: 647 S 647
>02_01_0325 - 2208480-2208674,2208772-2210609,2210980-2211109,
2211231-2211270,2211409-2211531,2211940-2212030,
2212396-2212480,2212565-2212720,2212797-2212853,
2212940-2213110,2213313-2213330,2213479-2213551,
2213754-2213839,2214348-2214466,2214542-2214641
Length = 1093
Score = 31.9 bits (69), Expect = 8.5
Identities = 22/89 (24%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 2186 PNPAYSPE-ISAKTSIIDFTVTMQGLEDQLLGRVILMEKSDLEEERVALFESVMKNQRSM 2244
P+P +P+ I+ + ++ Q L QL +++L +K L++++ + +NQ+ +
Sbjct: 588 PSPTQNPQRINGQRLLLSHQQKDQNL--QLQQQLLLQQKQQLQQQQ----QQQQQNQQQL 641
Query: 2245 KELESNLLCRLTSSEGSLVDDEALIQVLQ 2273
+ L+ L S + L D+E +Q+LQ
Sbjct: 642 NKSLGQLV-NLASQQSKLFDEELQLQILQ 669
>02_01_0118 + 870911-871203,872559-872679,872975-873092,873218-873354,
873583-873684,873862-873954,875047-875119,875213-875478
Length = 400
Score = 31.9 bits (69), Expect = 8.5
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 1853 LQNYPKDIINNEMVEHLVPYFEMEDYNMDTAKRVCGDVAGLLSWTKAMAFFHSVNKEVLP 1912
L+ P I+N V H V + + ED N+ + KR + G + A F S+ +P
Sbjct: 210 LRGSPSRIVNVNSVMHTVGFVDAEDMNLTSGKRKFTSLMGYSNSKLAQIKFSSMLHRRIP 269
Query: 1913 LKANL 1917
+A +
Sbjct: 270 AEAEI 274
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.320 0.136 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,326,267
Number of Sequences: 37544
Number of extensions: 3557067
Number of successful extensions: 9014
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 8992
Number of HSP's gapped (non-prelim): 42
length of query: 3112
length of database: 14,793,348
effective HSP length: 96
effective length of query: 3016
effective length of database: 11,189,124
effective search space: 33746397984
effective search space used: 33746397984
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 69 (31.9 bits)
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