Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002148-TA|BGIBMGA002148-PA|IPR003593|AAA ATPase,
IPR013602|Dynein heavy chain, N-terminal region 2, IPR011704|ATPase
associated with various cellular activities, AAA-5, IPR004273|Dynein
heavy chain
(3112 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 31 0.63
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 28 3.3
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 28 4.4
AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2 pro... 28 4.4
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 28 4.4
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 27 5.8
DQ013245-1|AAY34441.1| 487|Anopheles gambiae adrenodoxin reduct... 27 7.7
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 30.7 bits (66), Expect = 0.63
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 10/155 (6%)
Query: 1851 LQLQNYPKDIINNEMVEHLVPYFEMED-YNMDTAKRVCGDVAGLLSWTKAMAFFHSVNKE 1909
L+ K+ + NE+ + L+ ++D + +D+ D L+ AF ++ E
Sbjct: 767 LEAMTSTKEGLENELHQELMSQLSVQDQHEVDSLN----DEIRRLNQENKEAFTSRMSLE 822
Query: 1910 VLPLKANLMLQEARLKVAMDDLASA--ERQLEEREMSLRKVKEQYESAVSE-KQQLTDAA 1966
V K +L + D+L A E +E+R+ L + + + K+ LTD
Sbjct: 823 VTKNKLENLLTNNLFR-RKDELVQALQEISVEDRKRQLTNCRNEVVATEKRIKKVLTDTE 881
Query: 1967 NVCLRKMTAATALINGLGGEKIRWTQQSKDFKEQL 2001
V RK++ A L E W Q+ K+ +E+L
Sbjct: 882 EVD-RKLSEALKQQKTLQKELESWIQKEKEAQEKL 915
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/66 (25%), Positives = 32/66 (48%)
Query: 1936 RQLEEREMSLRKVKEQYESAVSEKQQLTDAANVCLRKMTAATALINGLGGEKIRWTQQSK 1995
++L+ER LR+ K + +S+ QQ +K TA + + EK+++ + +
Sbjct: 643 KELQERCAELREQKRDLQEQLSKYQQTKMKVKRQEQKCKELTARLVNVDEEKVKFERSCR 702
Query: 1996 DFKEQL 2001
EQL
Sbjct: 703 TIIEQL 708
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/73 (23%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 1678 MKQKELGDGALRMDTGLEKLREASISVEVLKKDLAVMEQDLALASEKADRVLTEVTERAM 1737
MKQ++ L +D E++ +A V+ L K+LA + Q +A + + + ++ M
Sbjct: 883 MKQEKAAHKTL-VDQMEEEMAKARREVQALAKELAAIHQSIANIESRIESMKSKRQTILM 941
Query: 1738 QAEIVKNQVQIVK 1750
QA++ ++ +++
Sbjct: 942 QAKMESIEIPLLQ 954
>AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2
protein.
Length = 755
Score = 27.9 bits (59), Expect = 4.4
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 596 FYTLYKLCEEQLTKQV---HYDFGLR-NILSVLRTLGAVKRVNSKDNESTIVMRVLRDMN 651
++T YK Q V Y + L I L+ + V + N+ N+ TI+ RVLR M+
Sbjct: 511 YFTGYKGYSVQYAHNVDASRYAYKLAYEIADELQEISQVPKSNTL-NKFTILARVLRTMH 569
Query: 652 LSKLIDEDEPLFIS 665
+ D + LF+S
Sbjct: 570 YQDIYDVCQKLFVS 583
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
protein.
Length = 2051
Score = 27.9 bits (59), Expect = 4.4
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 596 FYTLYKLCEEQLTKQV---HYDFGLR-NILSVLRTLGAVKRVNSKDNESTIVMRVLRDMN 651
++T YK Q V Y + L I L+ + V + N+ N+ TI+ RVLR M+
Sbjct: 511 YFTGYKGYSVQYAHNVDASRYAYKLAYEIADELQEISQVPKSNTL-NKFTILARVLRTMH 569
Query: 652 LSKLIDEDEPLFIS 665
+ D + LF+S
Sbjct: 570 YQDIYDVCQKLFVS 583
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 27.5 bits (58), Expect = 5.8
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 1673 KTIYQMKQKELGDGALRMDTGLEKLREASISVEVLKKDLAVMEQDLALASEKADRVLTEV 1732
K Y ++ L D + +R AS V ++KD +EQDL E+ L++V
Sbjct: 381 KEAYGTVRRTLQDVQAKQAAIERGMRNASERVTRIQKDARQIEQDL---QERNRDGLSQV 437
Query: 1733 TERAMQAEIVKNQVQIVKEKAEALVA 1758
+R E K Q++ ++ +++A
Sbjct: 438 EQRKQAVETEKAQLKERNDELASMIA 463
>DQ013245-1|AAY34441.1| 487|Anopheles gambiae adrenodoxin reductase
protein.
Length = 487
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/55 (25%), Positives = 24/55 (43%)
Query: 1546 ENQKRSLTNELVMEYFLNRTCQNLHVVLCFSPVSEAFRYRALRFPALISGCTIDW 1600
++ K++ E +E +H+V P+ AF + LR +S CT W
Sbjct: 193 DDLKKTDITEYALEKLSRSRIDTVHLVGRRGPLQAAFTIKELREMLKLSSCTTRW 247
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.320 0.136 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,027,010
Number of Sequences: 2123
Number of extensions: 125028
Number of successful extensions: 355
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 341
Number of HSP's gapped (non-prelim): 22
length of query: 3112
length of database: 516,269
effective HSP length: 77
effective length of query: 3035
effective length of database: 352,798
effective search space: 1070741930
effective search space used: 1070741930
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)
- SilkBase 1999-2023 -