Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002147-TA|BGIBMGA002147-PA|IPR013602|Dynein heavy chain,
N-terminal region 2
(89 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19322| Best HMM Match : No HMM Matches (HMM E-Value=.) 114 8e-27
SB_48071| Best HMM Match : AAA_5 (HMM E-Value=3.1e-06) 99 2e-22
SB_22006| Best HMM Match : DUF1489 (HMM E-Value=6.4) 99 2e-22
SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002) 78 1e-15
SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-07
SB_19677| Best HMM Match : DegQ (HMM E-Value=3.6) 50 3e-07
SB_9375| Best HMM Match : Sec6 (HMM E-Value=0.35) 47 2e-06
SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-05
SB_28863| Best HMM Match : EzrA (HMM E-Value=1.1) 40 4e-04
SB_15448| Best HMM Match : Utp11 (HMM E-Value=0.89) 38 0.002
SB_34605| Best HMM Match : APG6 (HMM E-Value=0.94) 34 0.014
SB_50950| Best HMM Match : AAA_5 (HMM E-Value=0.0006) 32 0.057
SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.075
SB_5257| Best HMM Match : SlyX (HMM E-Value=2.2) 30 0.30
SB_32741| Best HMM Match : Filament (HMM E-Value=0.39) 29 0.53
SB_53013| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.53
SB_32299| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.53
SB_44697| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 1.6
SB_25586| Best HMM Match : RVT_1 (HMM E-Value=2.3e-18) 26 3.7
SB_51389| Best HMM Match : Lac_bphage_repr (HMM E-Value=1.7) 26 4.9
SB_5077| Best HMM Match : DUF1265 (HMM E-Value=3.3) 26 4.9
SB_49264| Best HMM Match : Ank (HMM E-Value=3.7e-22) 25 6.5
SB_7108| Best HMM Match : Pili_assembly_C (HMM E-Value=0.83) 25 6.5
SB_22798| Best HMM Match : Cadherin (HMM E-Value=0) 25 6.5
SB_12254| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 6.5
SB_2892| Best HMM Match : RasGAP_C (HMM E-Value=0.83) 25 6.5
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 25 8.6
SB_22638| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.6
SB_6473| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.6
SB_23806| Best HMM Match : zf-CCHC (HMM E-Value=0.0069) 25 8.6
SB_17427| Best HMM Match : ResIII (HMM E-Value=0.6) 25 8.6
SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.6
>SB_19322| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4994
Score = 114 bits (275), Expect = 8e-27
Identities = 50/74 (67%), Positives = 63/74 (85%)
Query: 5 ALKEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKN 64
ALKEW AF LKK IDDFN+ CPLLELMANKAMK RHW+R+ +T + F+++NE+F L+N
Sbjct: 1438 ALKEWDAFNELKKKIDDFNECCPLLELMANKAMKERHWERLSNLTGHKFDVENENFLLRN 1497
Query: 65 ILEAPLLQNKEDIE 78
I+EAPLL++KEDIE
Sbjct: 1498 IMEAPLLKHKEDIE 1511
>SB_48071| Best HMM Match : AAA_5 (HMM E-Value=3.1e-06)
Length = 1532
Score = 99 bits (238), Expect = 2e-22
Identities = 43/73 (58%), Positives = 56/73 (76%)
Query: 6 LKEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNI 65
LKEW AF LKKTIDDF++ CPLLE+MANKAMK RHW RI ++ ++++E F L+ +
Sbjct: 403 LKEWQAFLELKKTIDDFSECCPLLEMMANKAMKERHWGRISQMVGVTLDVESETFQLRQL 462
Query: 66 LEAPLLQNKEDIE 78
+ APLL NKE+IE
Sbjct: 463 MSAPLLPNKEEIE 475
>SB_22006| Best HMM Match : DUF1489 (HMM E-Value=6.4)
Length = 276
Score = 99 bits (238), Expect = 2e-22
Identities = 43/73 (58%), Positives = 56/73 (76%)
Query: 6 LKEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNI 65
LKEW AF LKKTIDDF++ CPLLE+MANKAMK RHW RI ++ ++++E F L+ +
Sbjct: 204 LKEWQAFLELKKTIDDFSECCPLLEMMANKAMKERHWGRISQMVGVTLDVESETFQLRQL 263
Query: 66 LEAPLLQNKEDIE 78
+ APLL NKE+IE
Sbjct: 264 MSAPLLPNKEEIE 276
>SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002)
Length = 3616
Score = 77.8 bits (183), Expect = 1e-15
Identities = 33/52 (63%), Positives = 44/52 (84%)
Query: 27 PLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNILEAPLLQNKEDIE 78
PLLELMANKAMK RHW RI +T + F+++++ F L+NI+EAPLL++KEDIE
Sbjct: 1480 PLLELMANKAMKQRHWDRIANLTGHTFDIESDTFSLRNIMEAPLLKHKEDIE 1531
>SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3511
Score = 49.6 bits (113), Expect = 3e-07
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 7 KEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNIL 66
K W ++K I+ F PL++ + N AM+ RHW +I + F+ +DF L+ I+
Sbjct: 627 KNWEICDSIKSRIEQFKRTMPLIQDLKNSAMRDRHWSQIKTEVQKPFDHTGDDFTLEKII 686
Query: 67 EAPLLQNKEDI 77
E L Q E I
Sbjct: 687 ELGLDQFGEQI 697
>SB_19677| Best HMM Match : DegQ (HMM E-Value=3.6)
Length = 135
Score = 49.6 bits (113), Expect = 3e-07
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 7 KEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNIL 66
K W ++K I+ F PL++ + N AM+ RHW +I + F+ +DF L+ I+
Sbjct: 22 KNWEICDSIKSRIEQFKRTMPLIQDLKNSAMRDRHWSQIKTEVQKPFDHTGDDFTLEKII 81
Query: 67 EAPLLQNKEDI 77
E L Q E I
Sbjct: 82 ELGLDQFGEQI 92
>SB_9375| Best HMM Match : Sec6 (HMM E-Value=0.35)
Length = 1049
Score = 47.2 bits (107), Expect = 2e-06
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 6 LKEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNI 65
+K P L++ + +F + PL + N+A++ RHW+++M++T F+L+ F L+N+
Sbjct: 580 VKALPLCHVLEEKMKEFKNSIPLFSDLKNEALRERHWKKLMDMTGMKFDLNPATFTLQNM 639
Query: 66 LEAPLLQNKEDI 77
A L N D+
Sbjct: 640 F-AMELHNFSDV 650
>SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4700
Score = 41.9 bits (94), Expect = 7e-05
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 6 LKEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNI 65
++ W F L T+ + + + N A++ RHWQ++M+ TK F +D +D L ++
Sbjct: 1734 MRAWDGFTGLDSTVKNMVTSLRAVGELQNPAIRERHWQQLMQATKVKFVMD-DDTTLADL 1792
Query: 66 LEAPLLQNKED 76
L A L N ED
Sbjct: 1793 L-ALNLHNFED 1802
>SB_28863| Best HMM Match : EzrA (HMM E-Value=1.1)
Length = 939
Score = 39.5 bits (88), Expect = 4e-04
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 15 LKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNILEAPLLQNK 74
LK+ +++ P++ + N A+K RHW +I ++ Y F+ D E L + + ++
Sbjct: 559 LKEKLENMRHKLPVITNLRNPALKQRHWDQIQQIFNYHFK-DEEPLTLGLLDKIEAFEHT 617
Query: 75 EDIEVPEKQA 84
E IE QA
Sbjct: 618 ESIEEVSGQA 627
>SB_15448| Best HMM Match : Utp11 (HMM E-Value=0.89)
Length = 1328
Score = 37.5 bits (83), Expect = 0.002
Identities = 15/56 (26%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 15 LKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNILEAPL 70
+K +++F + PL++++ N ++ RHW+++ E+ + + D ED L + E L
Sbjct: 775 MKTKVEEFKEYLPLVQVVFNPGLRDRHWEQMSEILGFPLKPD-EDMNLAKMAEMNL 829
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/35 (31%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 25 MCPLLELMANKAM-KPRHWQRIMEVTKYVFELDNE 58
+C E +A KA+ P + + +ME+ Y+ +++NE
Sbjct: 534 LCEEYEKIAEKALTSPANTEHLMELKNYIEQVENE 568
>SB_34605| Best HMM Match : APG6 (HMM E-Value=0.94)
Length = 1047
Score = 34.3 bits (75), Expect = 0.014
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 14 ALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNILEAPLLQN 73
+++ ID F PLL+++ N ++ RHW ++ EV + + L N+LE L ++
Sbjct: 721 SVRSKIDKFKVHLPLLQVICNPGIRERHWTQMSEVVGFDIK-PEASTSLCNMLEYNLHKH 779
Query: 74 KEDIE 78
+ +E
Sbjct: 780 LDRLE 784
>SB_50950| Best HMM Match : AAA_5 (HMM E-Value=0.0006)
Length = 1552
Score = 32.3 bits (70), Expect = 0.057
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 27 PLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNILEAPLLQNKEDIE 78
PL+ +M N ++PRHW+ + E+ + D+ L+ +L+ L ++E
Sbjct: 838 PLIAIMCNPGIRPRHWKAMSEIVGFDVTPDSGS-TLRKVLKLNLTPYLNELE 888
>SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3367
Score = 31.9 bits (69), Expect = 0.075
Identities = 13/41 (31%), Positives = 27/41 (65%)
Query: 6 LKEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIM 46
L+++ +F ++KTI + M L+ + ++A+K RHW+ +M
Sbjct: 1308 LRQYASFEFVQKTIKTYLKMNMLIVELKSEALKERHWKTLM 1348
>SB_5257| Best HMM Match : SlyX (HMM E-Value=2.2)
Length = 641
Score = 29.9 bits (64), Expect = 0.30
Identities = 9/33 (27%), Positives = 21/33 (63%)
Query: 13 FALKKTIDDFNDMCPLLELMANKAMKPRHWQRI 45
+ +++ I+ F PL++ + N M+ RHW+++
Sbjct: 178 YEVREKIEAFKPYIPLIQGLRNPGMRSRHWEQL 210
>SB_32741| Best HMM Match : Filament (HMM E-Value=0.39)
Length = 1814
Score = 29.1 bits (62), Expect = 0.53
Identities = 12/54 (22%), Positives = 27/54 (50%)
Query: 15 LKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNILEA 68
L+K ++ + ++ PLL+ + +A+ HW + + K E ++LE+
Sbjct: 1191 LQKDVEKYKNVVPLLKYVRGEALSQDHWLELFRLLKMPKGTTLEKLTFGSVLES 1244
>SB_53013| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 29.1 bits (62), Expect = 0.53
Identities = 8/32 (25%), Positives = 21/32 (65%)
Query: 27 PLLELMANKAMKPRHWQRIMEVTKYVFELDNE 58
P+++ ++ AM+ RHW++++ + ++ NE
Sbjct: 4 PIIDDLSKSAMRQRHWKQLLRLAGGAVQISNE 35
>SB_32299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 234
Score = 29.1 bits (62), Expect = 0.53
Identities = 8/32 (25%), Positives = 21/32 (65%)
Query: 27 PLLELMANKAMKPRHWQRIMEVTKYVFELDNE 58
P+++ ++ AM+ RHW++++ + ++ NE
Sbjct: 4 PIIDDLSKSAMRQRHWKQLLRLAGGAVQISNE 35
>SB_44697| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 24 DMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKN 64
D CP L +A + R+ R + V+E D+ +C+KN
Sbjct: 105 DDCPYLHRVAGDVER-RYHLRYYKTATCVYETDSRGYCVKN 144
>SB_25586| Best HMM Match : RVT_1 (HMM E-Value=2.3e-18)
Length = 802
Score = 26.2 bits (55), Expect = 3.7
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 17 KTIDDFNDMCPLLELMANKAMKPRHWQRI 45
KT+ + CP LE + NK K H+ ++
Sbjct: 109 KTLKTPSTKCPALEAICNKCQKKGHFAKV 137
>SB_51389| Best HMM Match : Lac_bphage_repr (HMM E-Value=1.7)
Length = 343
Score = 25.8 bits (54), Expect = 4.9
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 10 PAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKN 64
P + +K+ D++ND+C + +L N + ++ + F +N DF N
Sbjct: 151 PKSYLIKQCRDNYNDLCRIEDLPNNHLGSKCSFAELLTIHAADFLDNNPDFDYAN 205
>SB_5077| Best HMM Match : DUF1265 (HMM E-Value=3.3)
Length = 121
Score = 25.8 bits (54), Expect = 4.9
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 10 PAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKN 64
P + +K+ D++ND+C + +L N + ++ + F +N DF N
Sbjct: 63 PKSYLIKQCRDNYNDLCHIEDLPNNHLGSKCSFAELLTIHAADFLDNNPDFDYAN 117
>SB_49264| Best HMM Match : Ank (HMM E-Value=3.7e-22)
Length = 775
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 2 DSTALKEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFE 54
DS A ++W L + + ++ND C + L + P W+++ E + F+
Sbjct: 82 DSFAAQQW-----LDEELYEWNDACNVPGLRQDHVSAPMRWRKLSEKERGPFD 129
>SB_7108| Best HMM Match : Pili_assembly_C (HMM E-Value=0.83)
Length = 401
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 10 PAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKN 64
P + +K+ D++ND+C + +L N + ++ + F +N DF N
Sbjct: 201 PKSYLIKQCRDNYNDLCHIEDLPNNYLGSKCSFAELLTIHAADFLDNNPDFDYAN 255
>SB_22798| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 3255
Score = 25.4 bits (53), Expect = 6.5
Identities = 12/25 (48%), Positives = 13/25 (52%)
Query: 11 AFFALKKTIDDFNDMCPLLELMANK 35
A ALK T+DD ND P L K
Sbjct: 391 AIAALKITVDDVNDNAPFFALSVYK 415
>SB_12254| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 25.4 bits (53), Expect = 6.5
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 15 LKKTIDDFNDMCPLLELMANKAMKPRHWQ 43
+K +++F PL+ + +K RHW+
Sbjct: 31 VKARLENFKINMPLIHALCTPGIKQRHWE 59
>SB_2892| Best HMM Match : RasGAP_C (HMM E-Value=0.83)
Length = 333
Score = 25.4 bits (53), Expect = 6.5
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 42 WQRIMEVTKYVFELDNEDFCLKNILEAPLLQN-KEDIEVPEKQARTRR 88
W+++ E + EL E F L+N +E L+ K D E+ +A R+
Sbjct: 66 WRKLREFEEREVELKEEIFELENQVETLKLEKLKRDREIERLEALLRK 113
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 25.0 bits (52), Expect = 8.6
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 15 LKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNE 58
L K ++ + C LE A +AM R +++ +T+ + EL+N+
Sbjct: 821 LSKQLESYISNCAELE-EAKRAMDNRLTEKVESLTEKIKELEND 863
>SB_22638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 431
Score = 25.0 bits (52), Expect = 8.6
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 45 IMEVTKYVFELDNEDFCLKNILEAP 69
I++ TK+V+ + ++ C KN E P
Sbjct: 293 IIQWTKHVYTIRKDEICEKNYTEIP 317
>SB_6473| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 25.0 bits (52), Expect = 8.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 27 PLLELMANKAMKPRHWQRIMEVTK 50
PL + MA+ A++ + W +ME T+
Sbjct: 10 PLFQAMASSALECKAWVEVMEGTR 33
>SB_23806| Best HMM Match : zf-CCHC (HMM E-Value=0.0069)
Length = 290
Score = 25.0 bits (52), Expect = 8.6
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 26 CPLLELMANKAMKPRHWQRI 45
CP + N KP HW +I
Sbjct: 145 CPAYGSLCNYCSKPNHWSKI 164
>SB_17427| Best HMM Match : ResIII (HMM E-Value=0.6)
Length = 486
Score = 25.0 bits (52), Expect = 8.6
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 18 TIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCL--KNILEAPL 70
T DDF +C LLE +K R+++V+ + E + DF L K +L A L
Sbjct: 428 TQDDFIALCKLLETRGIITLKKAKEMRMIKVSLKIDE-NEVDFALQDKTLLSAIL 481
>SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1357
Score = 25.0 bits (52), Expect = 8.6
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 54 ELDNEDFCLKNILEAPLLQNKEDIEVPE 81
++D D LK ++ P ++ K DI+VP+
Sbjct: 955 DIDTPDINLKGDIDTPDVKVKGDIDVPD 982
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.322 0.136 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,841,818
Number of Sequences: 59808
Number of extensions: 94229
Number of successful extensions: 218
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 190
Number of HSP's gapped (non-prelim): 33
length of query: 89
length of database: 16,821,457
effective HSP length: 66
effective length of query: 23
effective length of database: 12,874,129
effective search space: 296104967
effective search space used: 296104967
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 52 (25.0 bits)
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