Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002147-TA|BGIBMGA002147-PA|IPR013602|Dynein heavy chain,
N-terminal region 2
(89 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL391415-3|CAI21588.1| 4695|Homo sapiens dynein, axonemal, heavy... 107 4e-24
AL391415-2|CAI21587.1| 4176|Homo sapiens dynein, axonemal, heavy... 107 4e-24
AL353700-3|CAI20294.1| 4695|Homo sapiens dynein, axonemal, heavy... 107 4e-24
AL353700-2|CAI20293.1| 4176|Homo sapiens dynein, axonemal, heavy... 107 4e-24
AL353700-1|CAI20292.1| 4490|Homo sapiens dynein, axonemal, heavy... 107 4e-24
AL035690-5|CAI19770.1| 4695|Homo sapiens dynein, axonemal, heavy... 107 4e-24
AL035690-1|CAI19769.1| 4490|Homo sapiens dynein, axonemal, heavy... 107 4e-24
AL035555-4|CAI19822.1| 4695|Homo sapiens dynein, axonemal, heavy... 107 4e-24
AL035555-3|CAI19821.1| 4176|Homo sapiens dynein, axonemal, heavy... 107 4e-24
AL035555-1|CAI19819.1| 4490|Homo sapiens dynein, axonemal, heavy... 107 4e-24
AL034345-4|CAI42436.1| 4695|Homo sapiens dynein, axonemal, heavy... 107 4e-24
AL034345-3|CAI42435.1| 4176|Homo sapiens dynein, axonemal, heavy... 107 4e-24
AL034345-1|CAI42433.1| 4490|Homo sapiens dynein, axonemal, heavy... 107 4e-24
AF356519-1|AAK60620.1| 4490|Homo sapiens axonemal dynein heavy c... 107 4e-24
AY045575-1|AAK92217.1| 4624|Homo sapiens axonemal dynein heavy c... 99 2e-21
AF494040-1|AAM12861.1| 4116|Homo sapiens axonemal heavy chain dy... 47 8e-06
AB040936-1|BAA96027.2| 4464|Homo sapiens KIAA1503 protein protein. 45 3e-05
AJ404468-1|CAB94756.1| 4486|Homo sapiens axonemal dynein heavy c... 41 7e-04
AF257737-1|AAF69004.1| 4486|Homo sapiens ciliary dynein heavy ch... 41 7e-04
AF327442-1|AAL37427.1| 4024|Homo sapiens ciliary dynein heavy ch... 38 0.005
AC104600-1|AAY24051.1| 1270|Homo sapiens unknown protein. 38 0.005
AB023161-1|BAA76788.2| 4031|Homo sapiens KIAA0944 protein protein. 38 0.005
AJ320497-1|CAC60121.1| 4523|Homo sapiens axonemal beta heavy cha... 35 0.035
AK125990-1|BAC86379.1| 1205|Homo sapiens protein ( Homo sapiens ... 29 3.0
AB037831-1|BAA92648.2| 4355|Homo sapiens KIAA1410 protein protein. 29 3.0
BC001302-1|AAH01302.1| 495|Homo sapiens RAD18 homolog (S. cerev... 28 5.3
AY961989-1|AAX44049.1| 495|Homo sapiens RAD18 homolog (S. cerev... 28 5.3
AY004333-1|AAF86618.1| 495|Homo sapiens RAD18 protein. 28 5.3
AK222771-1|BAD96491.1| 495|Homo sapiens postreplication repair ... 28 5.3
AK023075-1|BAB14392.1| 495|Homo sapiens protein ( Homo sapiens ... 28 5.3
AF169796-1|AAF80856.1| 484|Homo sapiens zinc finger DNA binding... 28 5.3
AB035274-1|BAA99284.1| 495|Homo sapiens postreplication repair ... 28 5.3
U47077-1|AAB39925.5| 4128|Homo sapiens DNA-dependent protein kin... 27 9.2
U34994-1|AAC50210.3| 4097|Homo sapiens DNA dependent protein kin... 27 9.2
AY316117-1|AAP69525.1| 4128|Homo sapiens protein kinase, DNA-act... 27 9.2
AY030284-1|AAK40350.1| 879|Homo sapiens DNA-dependent protein k... 27 9.2
AB208860-1|BAD92097.1| 726|Homo sapiens protein kinase, DNA-act... 27 9.2
>AL391415-3|CAI21588.1| 4695|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4695
Score = 107 bits (258), Expect = 4e-24
Identities = 45/73 (61%), Positives = 60/73 (82%)
Query: 6 LKEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNI 65
LK+W AF LKK IDDF++ CPLLE+M NKAMK RHW RI E+T F+++++ FCL+NI
Sbjct: 1531 LKDWQAFLDLKKRIDDFSESCPLLEMMTNKAMKQRHWDRISELTGTPFDVESDSFCLRNI 1590
Query: 66 LEAPLLQNKEDIE 78
+EAPLL++K+DIE
Sbjct: 1591 MEAPLLKHKDDIE 1603
>AL391415-2|CAI21587.1| 4176|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4176
Score = 107 bits (258), Expect = 4e-24
Identities = 45/73 (61%), Positives = 60/73 (82%)
Query: 6 LKEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNI 65
LK+W AF LKK IDDF++ CPLLE+M NKAMK RHW RI E+T F+++++ FCL+NI
Sbjct: 1531 LKDWQAFLDLKKRIDDFSESCPLLEMMTNKAMKQRHWDRISELTGTPFDVESDSFCLRNI 1590
Query: 66 LEAPLLQNKEDIE 78
+EAPLL++K+DIE
Sbjct: 1591 MEAPLLKHKDDIE 1603
>AL353700-3|CAI20294.1| 4695|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4695
Score = 107 bits (258), Expect = 4e-24
Identities = 45/73 (61%), Positives = 60/73 (82%)
Query: 6 LKEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNI 65
LK+W AF LKK IDDF++ CPLLE+M NKAMK RHW RI E+T F+++++ FCL+NI
Sbjct: 1531 LKDWQAFLDLKKRIDDFSESCPLLEMMTNKAMKQRHWDRISELTGTPFDVESDSFCLRNI 1590
Query: 66 LEAPLLQNKEDIE 78
+EAPLL++K+DIE
Sbjct: 1591 MEAPLLKHKDDIE 1603
>AL353700-2|CAI20293.1| 4176|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4176
Score = 107 bits (258), Expect = 4e-24
Identities = 45/73 (61%), Positives = 60/73 (82%)
Query: 6 LKEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNI 65
LK+W AF LKK IDDF++ CPLLE+M NKAMK RHW RI E+T F+++++ FCL+NI
Sbjct: 1531 LKDWQAFLDLKKRIDDFSESCPLLEMMTNKAMKQRHWDRISELTGTPFDVESDSFCLRNI 1590
Query: 66 LEAPLLQNKEDIE 78
+EAPLL++K+DIE
Sbjct: 1591 MEAPLLKHKDDIE 1603
>AL353700-1|CAI20292.1| 4490|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4490
Score = 107 bits (258), Expect = 4e-24
Identities = 45/73 (61%), Positives = 60/73 (82%)
Query: 6 LKEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNI 65
LK+W AF LKK IDDF++ CPLLE+M NKAMK RHW RI E+T F+++++ FCL+NI
Sbjct: 1326 LKDWQAFLDLKKRIDDFSESCPLLEMMTNKAMKQRHWDRISELTGTPFDVESDSFCLRNI 1385
Query: 66 LEAPLLQNKEDIE 78
+EAPLL++K+DIE
Sbjct: 1386 MEAPLLKHKDDIE 1398
>AL035690-5|CAI19770.1| 4695|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4695
Score = 107 bits (258), Expect = 4e-24
Identities = 45/73 (61%), Positives = 60/73 (82%)
Query: 6 LKEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNI 65
LK+W AF LKK IDDF++ CPLLE+M NKAMK RHW RI E+T F+++++ FCL+NI
Sbjct: 1531 LKDWQAFLDLKKRIDDFSESCPLLEMMTNKAMKQRHWDRISELTGTPFDVESDSFCLRNI 1590
Query: 66 LEAPLLQNKEDIE 78
+EAPLL++K+DIE
Sbjct: 1591 MEAPLLKHKDDIE 1603
>AL035690-1|CAI19769.1| 4490|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4490
Score = 107 bits (258), Expect = 4e-24
Identities = 45/73 (61%), Positives = 60/73 (82%)
Query: 6 LKEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNI 65
LK+W AF LKK IDDF++ CPLLE+M NKAMK RHW RI E+T F+++++ FCL+NI
Sbjct: 1326 LKDWQAFLDLKKRIDDFSESCPLLEMMTNKAMKQRHWDRISELTGTPFDVESDSFCLRNI 1385
Query: 66 LEAPLLQNKEDIE 78
+EAPLL++K+DIE
Sbjct: 1386 MEAPLLKHKDDIE 1398
>AL035555-4|CAI19822.1| 4695|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4695
Score = 107 bits (258), Expect = 4e-24
Identities = 45/73 (61%), Positives = 60/73 (82%)
Query: 6 LKEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNI 65
LK+W AF LKK IDDF++ CPLLE+M NKAMK RHW RI E+T F+++++ FCL+NI
Sbjct: 1531 LKDWQAFLDLKKRIDDFSESCPLLEMMTNKAMKQRHWDRISELTGTPFDVESDSFCLRNI 1590
Query: 66 LEAPLLQNKEDIE 78
+EAPLL++K+DIE
Sbjct: 1591 MEAPLLKHKDDIE 1603
>AL035555-3|CAI19821.1| 4176|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4176
Score = 107 bits (258), Expect = 4e-24
Identities = 45/73 (61%), Positives = 60/73 (82%)
Query: 6 LKEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNI 65
LK+W AF LKK IDDF++ CPLLE+M NKAMK RHW RI E+T F+++++ FCL+NI
Sbjct: 1531 LKDWQAFLDLKKRIDDFSESCPLLEMMTNKAMKQRHWDRISELTGTPFDVESDSFCLRNI 1590
Query: 66 LEAPLLQNKEDIE 78
+EAPLL++K+DIE
Sbjct: 1591 MEAPLLKHKDDIE 1603
>AL035555-1|CAI19819.1| 4490|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4490
Score = 107 bits (258), Expect = 4e-24
Identities = 45/73 (61%), Positives = 60/73 (82%)
Query: 6 LKEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNI 65
LK+W AF LKK IDDF++ CPLLE+M NKAMK RHW RI E+T F+++++ FCL+NI
Sbjct: 1326 LKDWQAFLDLKKRIDDFSESCPLLEMMTNKAMKQRHWDRISELTGTPFDVESDSFCLRNI 1385
Query: 66 LEAPLLQNKEDIE 78
+EAPLL++K+DIE
Sbjct: 1386 MEAPLLKHKDDIE 1398
>AL034345-4|CAI42436.1| 4695|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4695
Score = 107 bits (258), Expect = 4e-24
Identities = 45/73 (61%), Positives = 60/73 (82%)
Query: 6 LKEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNI 65
LK+W AF LKK IDDF++ CPLLE+M NKAMK RHW RI E+T F+++++ FCL+NI
Sbjct: 1531 LKDWQAFLDLKKRIDDFSESCPLLEMMTNKAMKQRHWDRISELTGTPFDVESDSFCLRNI 1590
Query: 66 LEAPLLQNKEDIE 78
+EAPLL++K+DIE
Sbjct: 1591 MEAPLLKHKDDIE 1603
>AL034345-3|CAI42435.1| 4176|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4176
Score = 107 bits (258), Expect = 4e-24
Identities = 45/73 (61%), Positives = 60/73 (82%)
Query: 6 LKEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNI 65
LK+W AF LKK IDDF++ CPLLE+M NKAMK RHW RI E+T F+++++ FCL+NI
Sbjct: 1531 LKDWQAFLDLKKRIDDFSESCPLLEMMTNKAMKQRHWDRISELTGTPFDVESDSFCLRNI 1590
Query: 66 LEAPLLQNKEDIE 78
+EAPLL++K+DIE
Sbjct: 1591 MEAPLLKHKDDIE 1603
>AL034345-1|CAI42433.1| 4490|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4490
Score = 107 bits (258), Expect = 4e-24
Identities = 45/73 (61%), Positives = 60/73 (82%)
Query: 6 LKEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNI 65
LK+W AF LKK IDDF++ CPLLE+M NKAMK RHW RI E+T F+++++ FCL+NI
Sbjct: 1326 LKDWQAFLDLKKRIDDFSESCPLLEMMTNKAMKQRHWDRISELTGTPFDVESDSFCLRNI 1385
Query: 66 LEAPLLQNKEDIE 78
+EAPLL++K+DIE
Sbjct: 1386 MEAPLLKHKDDIE 1398
>AF356519-1|AAK60620.1| 4490|Homo sapiens axonemal dynein heavy chain
8 protein.
Length = 4490
Score = 107 bits (258), Expect = 4e-24
Identities = 45/73 (61%), Positives = 60/73 (82%)
Query: 6 LKEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNI 65
LK+W AF LKK IDDF++ CPLLE+M NKAMK RHW RI E+T F+++++ FCL+NI
Sbjct: 1326 LKDWQAFLDLKKRIDDFSESCPLLEMMTNKAMKQRHWDRISELTGTPFDVESDSFCLRNI 1385
Query: 66 LEAPLLQNKEDIE 78
+EAPLL++K+DIE
Sbjct: 1386 MEAPLLKHKDDIE 1398
>AY045575-1|AAK92217.1| 4624|Homo sapiens axonemal dynein heavy chain
DNAH5 protein.
Length = 4624
Score = 98.7 bits (235), Expect = 2e-21
Identities = 44/74 (59%), Positives = 57/74 (77%)
Query: 5 ALKEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKN 64
ALK+W AF LKK IDDF++ CPLLE MA+KAM RHW+RI +T + ++ NE F L+N
Sbjct: 1459 ALKDWQAFLDLKKIIDDFSECCPLLEYMASKAMMERHWERITTLTGHSLDVGNESFKLRN 1518
Query: 65 ILEAPLLQNKEDIE 78
I+EAPLL+ KE+IE
Sbjct: 1519 IMEAPLLKYKEEIE 1532
>AF494040-1|AAM12861.1| 4116|Homo sapiens axonemal heavy chain
dynein type 3 protein.
Length = 4116
Score = 47.2 bits (107), Expect = 8e-06
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 15 LKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNILE 67
+K ID F P+L + N MK RHWQ+I E+ Y + E CL N+LE
Sbjct: 930 VKIKIDKFKQYIPILSISCNPGMKDRHWQQISEIVGYEIK-PTETTCLSNMLE 981
>AB040936-1|BAA96027.2| 4464|Homo sapiens KIAA1503 protein protein.
Length = 4464
Score = 45.2 bits (102), Expect = 3e-05
Identities = 19/71 (26%), Positives = 37/71 (52%)
Query: 7 KEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNIL 66
+ W + I+ F PL+ + N A++ RHW ++ + + F+ ++E F L+ I+
Sbjct: 1318 RNWEIIETTRSKIEQFKRTMPLISDLRNPALRERHWDQVRDEIQREFDQESESFTLEQIV 1377
Query: 67 EAPLLQNKEDI 77
E + Q+ E I
Sbjct: 1378 ELGMDQHVEKI 1388
>AJ404468-1|CAB94756.1| 4486|Homo sapiens axonemal dynein heavy chain
9 protein.
Length = 4486
Score = 40.7 bits (91), Expect = 7e-04
Identities = 22/82 (26%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 6 LKEWPAFFALKKTI-DDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKN 64
++ W AF L+ T+ + + + + EL N A++ RHW+++M+ T F +D +D L +
Sbjct: 1350 VRAWDAFTGLESTVWNTLSSLRAVAELQ-NPAIRERHWRQLMQATGVSFTMD-QDTTLAH 1407
Query: 65 ILEAPLLQNKEDIE-VPEKQAR 85
+L+ L ++++ + +K A+
Sbjct: 1408 LLQLQLHHYEDEVRGIVDKAAK 1429
>AF257737-1|AAF69004.1| 4486|Homo sapiens ciliary dynein heavy chain 9
protein.
Length = 4486
Score = 40.7 bits (91), Expect = 7e-04
Identities = 22/82 (26%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 6 LKEWPAFFALKKTI-DDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKN 64
++ W AF L+ T+ + + + + EL N A++ RHW+++M+ T F +D +D L +
Sbjct: 1350 VRAWDAFTGLESTVWNTLSSLRAVAELQ-NPAIRERHWRQLMQATGVSFTMD-QDTTLAH 1407
Query: 65 ILEAPLLQNKEDIE-VPEKQAR 85
+L+ L ++++ + +K A+
Sbjct: 1408 LLQLQLHHYEDEVRGIVDKAAK 1429
>AF327442-1|AAL37427.1| 4024|Homo sapiens ciliary dynein heavy chain
7 protein.
Length = 4024
Score = 37.9 bits (84), Expect = 0.005
Identities = 13/56 (23%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 15 LKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNILEAPL 70
++ ++DF PL++++ N ++PRHW+ + + Y + ++D + + L+ L
Sbjct: 827 VRSKVEDFKQHIPLIQVICNPGLRPRHWEAMSAIVGYPLQ-PSDDSTVSSFLDMNL 881
>AC104600-1|AAY24051.1| 1270|Homo sapiens unknown protein.
Length = 1270
Score = 37.9 bits (84), Expect = 0.005
Identities = 13/56 (23%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 15 LKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNILEAPL 70
++ ++DF PL++++ N ++PRHW+ + + Y + ++D + + L+ L
Sbjct: 822 VRSKVEDFKQHIPLIQVICNPGLRPRHWEAMSAIVGYPLQ-PSDDSTVSSFLDMNL 876
>AB023161-1|BAA76788.2| 4031|Homo sapiens KIAA0944 protein protein.
Length = 4031
Score = 37.9 bits (84), Expect = 0.005
Identities = 13/56 (23%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 15 LKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNILEAPL 70
++ ++DF PL++++ N ++PRHW+ + + Y + ++D + + L+ L
Sbjct: 834 VRSKVEDFKQHIPLIQVICNPGLRPRHWEAMSAIVGYPLQ-PSDDSTVSSFLDMNL 888
>AJ320497-1|CAC60121.1| 4523|Homo sapiens axonemal beta heavy chain
dynein type 11 protein.
Length = 4523
Score = 35.1 bits (77), Expect = 0.035
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 6 LKEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNI 65
++ W A+ L+ T+ D + + + A++ RHW ++M+ F L NE L ++
Sbjct: 1379 VRVWDAYTGLEGTVKDMTASLRAITELQSPALRDRHWHQLMKAIGVKF-LINEATTLADL 1437
Query: 66 LEAPLLQNKEDI 77
L L + ++D+
Sbjct: 1438 LALRLHRVEDDV 1449
>AK125990-1|BAC86379.1| 1205|Homo sapiens protein ( Homo sapiens cDNA
FLJ44002 fis, clone TESTI4022873. ).
Length = 1205
Score = 28.7 bits (61), Expect = 3.0
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 15 LKKTIDDFNDMCPLLELMANKAMKPRHWQRI 45
++ I++F PL++ + N M+ RHW+ +
Sbjct: 1084 IRARIEEFKPYIPLIQGLRNPGMRIRHWETL 1114
>AB037831-1|BAA92648.2| 4355|Homo sapiens KIAA1410 protein protein.
Length = 4355
Score = 28.7 bits (61), Expect = 3.0
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 15 LKKTIDDFNDMCPLLELMANKAMKPRHWQRI 45
++ I++F PL++ + N M+ RHW+ +
Sbjct: 1109 IRARIEEFKPYIPLIQGLRNPGMRIRHWETL 1139
>BC001302-1|AAH01302.1| 495|Homo sapiens RAD18 homolog (S.
cerevisiae) protein.
Length = 495
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 1 MDSTALKEWPAFFALKKTIDD 21
MDS A WP A+ KTIDD
Sbjct: 1 MDSLAESRWPPGLAVMKTIDD 21
>AY961989-1|AAX44049.1| 495|Homo sapiens RAD18 homolog (S.
cerevisiae) protein.
Length = 495
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 1 MDSTALKEWPAFFALKKTIDD 21
MDS A WP A+ KTIDD
Sbjct: 1 MDSLAESRWPPGLAVMKTIDD 21
>AY004333-1|AAF86618.1| 495|Homo sapiens RAD18 protein.
Length = 495
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 1 MDSTALKEWPAFFALKKTIDD 21
MDS A WP A+ KTIDD
Sbjct: 1 MDSLAESRWPPGLAVMKTIDD 21
>AK222771-1|BAD96491.1| 495|Homo sapiens postreplication repair
protein hRAD18p variant protein.
Length = 495
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 1 MDSTALKEWPAFFALKKTIDD 21
MDS A WP A+ KTIDD
Sbjct: 1 MDSLAESRWPPGLAVMKTIDD 21
>AK023075-1|BAB14392.1| 495|Homo sapiens protein ( Homo sapiens
cDNA FLJ13013 fis, clone NT2RP3000590, weakly similar
to UVS-2 PROTEIN. ).
Length = 495
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 1 MDSTALKEWPAFFALKKTIDD 21
MDS A WP A+ KTIDD
Sbjct: 1 MDSLAESRWPPGLAVMKTIDD 21
>AF169796-1|AAF80856.1| 484|Homo sapiens zinc finger DNA binding
protein protein.
Length = 484
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 1 MDSTALKEWPAFFALKKTIDD 21
MDS A WP A+ KTIDD
Sbjct: 1 MDSLAESRWPPGLAVMKTIDD 21
>AB035274-1|BAA99284.1| 495|Homo sapiens postreplication repair
protein hRAD18p protein.
Length = 495
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 1 MDSTALKEWPAFFALKKTIDD 21
MDS A WP A+ KTIDD
Sbjct: 1 MDSLAESRWPPGLAVMKTIDD 21
>U47077-1|AAB39925.5| 4128|Homo sapiens DNA-dependent protein kinase
catalytic subunit protein.
Length = 4128
Score = 27.1 bits (57), Expect = 9.2
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 15 LKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNILEAPLLQNK 74
L+ + DFND+ +L L NK KP + E + ++ + E L+N LE P +
Sbjct: 3652 LRMKLSDFNDITNMLLLKMNKDSKPP--GNLKECSPWMSDFKVE--FLRNELEIPGQYDG 3707
Query: 75 EDIEVPEKQAR 85
+PE R
Sbjct: 3708 RGKPLPEYHVR 3718
>U34994-1|AAC50210.3| 4097|Homo sapiens DNA dependent protein kinase
catalytic subunit protein.
Length = 4097
Score = 27.1 bits (57), Expect = 9.2
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 15 LKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNILEAPLLQNK 74
L+ + DFND+ +L L NK KP + E + ++ + E L+N LE P +
Sbjct: 3652 LRMKLSDFNDITNMLLLKMNKDSKPP--GNLKECSPWMSDFKVE--FLRNELEIPGQYDG 3707
Query: 75 EDIEVPEKQAR 85
+PE R
Sbjct: 3708 RGKPLPEYHVR 3718
>AY316117-1|AAP69525.1| 4128|Homo sapiens protein kinase,
DNA-activated, catalytic polypeptide protein.
Length = 4128
Score = 27.1 bits (57), Expect = 9.2
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 15 LKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNILEAPLLQNK 74
L+ + DFND+ +L L NK KP + E + ++ + E L+N LE P +
Sbjct: 3652 LRMKLSDFNDITNMLLLKMNKDSKPP--GNLKECSPWMSDFKVE--FLRNELEIPGQYDG 3707
Query: 75 EDIEVPEKQAR 85
+PE R
Sbjct: 3708 RGKPLPEYHVR 3718
>AY030284-1|AAK40350.1| 879|Homo sapiens DNA-dependent protein
kinase protein.
Length = 879
Score = 27.1 bits (57), Expect = 9.2
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 15 LKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNILEAPLLQNK 74
L+ + DFND+ +L L NK KP + E + ++ + E L+N LE P +
Sbjct: 403 LRMKLSDFNDITNMLLLKMNKDSKPP--GNLKECSPWMSDFKVE--FLRNELEIPGQYDG 458
Query: 75 EDIEVPEKQAR 85
+PE R
Sbjct: 459 RGKPLPEYHVR 469
>AB208860-1|BAD92097.1| 726|Homo sapiens protein kinase,
DNA-activated, catalytic polypeptide variant protein.
Length = 726
Score = 27.1 bits (57), Expect = 9.2
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 15 LKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNILEAPLLQNK 74
L+ + DFND+ +L L NK KP + E + ++ + E L+N LE P +
Sbjct: 281 LRMKLSDFNDITNMLLLKMNKDSKPP--GNLKECSPWMSDFKVE--FLRNELEIPGQYDG 336
Query: 75 EDIEVPEKQAR 85
+PE R
Sbjct: 337 RGKPLPEYHVR 347
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.322 0.136 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,883,053
Number of Sequences: 224733
Number of extensions: 382647
Number of successful extensions: 725
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 691
Number of HSP's gapped (non-prelim): 39
length of query: 89
length of database: 73,234,838
effective HSP length: 67
effective length of query: 22
effective length of database: 58,177,727
effective search space: 1279909994
effective search space used: 1279909994
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 57 (27.1 bits)
- SilkBase 1999-2023 -