Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002147-TA|BGIBMGA002147-PA|IPR013602|Dynein heavy chain,
N-terminal region 2
(89 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81096-8|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr... 36 0.005
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr... 36 0.005
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 31 0.075
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 31 0.075
AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin... 27 1.2
Z93397-6|CAB07718.2| 550|Caenorhabditis elegans Hypothetical pr... 27 1.6
Z75525-7|CAH10769.1| 573|Caenorhabditis elegans Hypothetical pr... 27 1.6
Z75525-6|CAA99765.2| 623|Caenorhabditis elegans Hypothetical pr... 27 1.6
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 27 1.6
U52002-9|AAB37727.2| 839|Caenorhabditis elegans Human dice1 (de... 27 1.6
U52002-8|AAU05577.1| 842|Caenorhabditis elegans Human dice1 (de... 27 1.6
AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical... 27 1.6
AF003925-1|AAB61344.1| 573|Caenorhabditis elegans mRNA capping ... 27 1.6
AF039052-5|AAF98626.2| 586|Caenorhabditis elegans Hypothetical ... 26 3.7
AL032655-4|CAB63413.2| 485|Caenorhabditis elegans Hypothetical ... 25 4.9
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 25 6.5
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 25 6.5
AC024201-12|AAL27266.1| 544|Caenorhabditis elegans Suppressor o... 25 6.5
Z81512-5|CAI79169.1| 417|Caenorhabditis elegans Hypothetical pr... 25 8.6
Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical p... 25 8.6
Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical pr... 25 8.6
Z66520-11|CAA91391.2| 600|Caenorhabditis elegans Hypothetical p... 25 8.6
AF038615-2|AAB94145.1| 782|Caenorhabditis elegans Hypothetical ... 25 8.6
>Z81096-8|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical
protein B0365.7 protein.
Length = 2769
Score = 35.5 bits (78), Expect = 0.005
Identities = 17/79 (21%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 11 AFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNILEAPL 70
A ++ + +F + P+L ++ +AMK RHW+ I++ ++ +++ + +LE
Sbjct: 677 ALLKIEIVLAEFEKLLPVLGAISCQAMKDRHWKMILQDSETSVKVEGNPL-VSELLEMNF 735
Query: 71 LQNKEDIEVPEKQARTRRI 89
++ + E QA R+
Sbjct: 736 IEKADKFEQVGAQAEKERV 754
>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical
protein B0365.7 protein.
Length = 2769
Score = 35.5 bits (78), Expect = 0.005
Identities = 17/79 (21%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 11 AFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNILEAPL 70
A ++ + +F + P+L ++ +AMK RHW+ I++ ++ +++ + +LE
Sbjct: 677 ALLKIEIVLAEFEKLLPVLGAISCQAMKDRHWKMILQDSETSVKVEGNPL-VSELLEMNF 735
Query: 71 LQNKEDIEVPEKQARTRRI 89
++ + E QA R+
Sbjct: 736 IEKADKFEQVGAQAEKERV 754
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 31.5 bits (68), Expect = 0.075
Identities = 15/72 (20%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 7 KEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNIL 66
+ + ++ +K+ + + M L+ + ++A+K RHW ++M+ + + L D L +
Sbjct: 1345 RTYKSYEHVKQMLHTYGKMNMLVAELKSEALKERHWHQMMKEMRVNWNL--SDLTLGQVW 1402
Query: 67 EAPLLQNKEDIE 78
+A +L+++ I+
Sbjct: 1403 DADILRHEHTIK 1414
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 31.5 bits (68), Expect = 0.075
Identities = 15/72 (20%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 7 KEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNIL 66
+ + ++ +K+ + + M L+ + ++A+K RHW ++M+ + + L D L +
Sbjct: 1345 RTYKSYEHVKQMLHTYGKMNMLVAELKSEALKERHWHQMMKEMRVNWNL--SDLTLGQVW 1402
Query: 67 EAPLLQNKEDIE 78
+A +L+++ I+
Sbjct: 1403 DADILRHEHTIK 1414
>AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin
related protein 2 protein.
Length = 1335
Score = 27.5 bits (58), Expect = 1.2
Identities = 13/63 (20%), Positives = 27/63 (42%)
Query: 21 DFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNILEAPLLQNKEDIEVP 80
DF C A+ ++ H ++ + + + N L I ++ + QN+ I P
Sbjct: 780 DFESFCKKSRWQASHSLNTSHLLAVIATSNTLMAMKNSALQLAKIRKSVVEQNQSTIHQP 839
Query: 81 EKQ 83
++Q
Sbjct: 840 DRQ 842
>Z93397-6|CAB07718.2| 550|Caenorhabditis elegans Hypothetical
protein ZC482.4 protein.
Length = 550
Score = 27.1 bits (57), Expect = 1.6
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 19 IDDFNDMCPLLELMANKAMKPRHWQRIMEV 48
I FND PL+++ +NK MK + R++ +
Sbjct: 399 ICSFNDAVPLVQIHSNKQMKKANLGRVINL 428
>Z75525-7|CAH10769.1| 573|Caenorhabditis elegans Hypothetical
protein C03D6.3b protein.
Length = 573
Score = 27.1 bits (57), Expect = 1.6
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 52 VFELDNEDFCLKNILEAPLLQNKEDIEV 79
VFE++N DF KN APL++ D EV
Sbjct: 323 VFEIENLDFVTKN--GAPLMETLVDTEV 348
>Z75525-6|CAA99765.2| 623|Caenorhabditis elegans Hypothetical
protein C03D6.3a protein.
Length = 623
Score = 27.1 bits (57), Expect = 1.6
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 52 VFELDNEDFCLKNILEAPLLQNKEDIEV 79
VFE++N DF KN APL++ D EV
Sbjct: 335 VFEIENLDFVTKN--GAPLMETLVDTEV 360
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 59 protein.
Length = 1592
Score = 27.1 bits (57), Expect = 1.6
Identities = 15/46 (32%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 35 KAMKPRHWQRIMEVTKYVFELDNEDFCLKNIL--EAPLLQNKEDIE 78
K +K R+ Q +ME ++ ELDN + L +L +A ++Q ++D++
Sbjct: 534 KELKERNKQLVMEKSEIQRELDNINDHLDQVLVEKATVVQQRDDMQ 579
>U52002-9|AAB37727.2| 839|Caenorhabditis elegans Human dice1
(deleted in cancer)homolog protein 1, isoform a protein.
Length = 839
Score = 27.1 bits (57), Expect = 1.6
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 54 ELDNEDFCLKNILEAPLLQNKEDIEVPEK 82
E+D++D +KN+ E L+ KE+ +V K
Sbjct: 728 EMDSDDQLMKNLDEVQALRKKEEAQVQPK 756
>U52002-8|AAU05577.1| 842|Caenorhabditis elegans Human dice1
(deleted in cancer)homolog protein 1, isoform b protein.
Length = 842
Score = 27.1 bits (57), Expect = 1.6
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 54 ELDNEDFCLKNILEAPLLQNKEDIEVPEK 82
E+D++D +KN+ E L+ KE+ +V K
Sbjct: 731 EMDSDDQLMKNLDEVQALRKKEEAQVQPK 759
>AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical
protein Y67A10A.3 protein.
Length = 1237
Score = 27.1 bits (57), Expect = 1.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 2 DSTALKEWPAFFALKKTIDDFND 24
D ALK++ F+ LKK+ +D +D
Sbjct: 367 DDDALKDFDKFYELKKSFEDISD 389
>AF003925-1|AAB61344.1| 573|Caenorhabditis elegans mRNA capping
enzyme protein.
Length = 573
Score = 27.1 bits (57), Expect = 1.6
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 52 VFELDNEDFCLKNILEAPLLQNKEDIEV 79
VFE++N DF KN APL++ D EV
Sbjct: 323 VFEIENLDFVTKN--GAPLMETLVDTEV 348
>AF039052-5|AAF98626.2| 586|Caenorhabditis elegans Hypothetical
protein T22D1.4 protein.
Length = 586
Score = 25.8 bits (54), Expect = 3.7
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 13 FALKKTIDD--FNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNED 59
+ALK + D FND+ ++E + K + P H +R+ T Y + E+
Sbjct: 332 YALKTKLFDHVFNDI--VVEKLRTKVLLPEHVKRVKVATPYAVDRRPEE 378
>AL032655-4|CAB63413.2| 485|Caenorhabditis elegans Hypothetical
protein Y6B3B.9 protein.
Length = 485
Score = 25.4 bits (53), Expect = 4.9
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 25 MCPLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNILEA 68
MC MA ++ +H I+ YV E+ LKN++ A
Sbjct: 74 MCESERYMAIDDLRSKHGYAIVRFVNYVNEMGQTGATLKNMVHA 117
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 25.0 bits (52), Expect = 6.5
Identities = 11/48 (22%), Positives = 24/48 (50%)
Query: 1 MDSTALKEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEV 48
+DS L + A++ + DF D+ L+E + ++ W+ I+ +
Sbjct: 345 VDSKMLTKEDDVVAMEMYLSDFRDLSKLIETLRSEWKHASLWESILAI 392
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 25.0 bits (52), Expect = 6.5
Identities = 11/48 (22%), Positives = 24/48 (50%)
Query: 1 MDSTALKEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEV 48
+DS L + A++ + DF D+ L+E + ++ W+ I+ +
Sbjct: 345 VDSKMLTKEDDVVAMEMYLSDFRDLSKLIETLRSEWKHASLWESILAI 392
>AC024201-12|AAL27266.1| 544|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform b protein.
Length = 544
Score = 25.0 bits (52), Expect = 6.5
Identities = 11/48 (22%), Positives = 24/48 (50%)
Query: 1 MDSTALKEWPAFFALKKTIDDFNDMCPLLELMANKAMKPRHWQRIMEV 48
+DS L + A++ + DF D+ L+E + ++ W+ I+ +
Sbjct: 345 VDSKMLTKEDDVVAMEMYLSDFRDLSKLIETLRSEWKHASLWESILAI 392
>Z81512-5|CAI79169.1| 417|Caenorhabditis elegans Hypothetical
protein F25C8.5 protein.
Length = 417
Score = 24.6 bits (51), Expect = 8.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 53 FELDNEDFCLKNILEAPLLQNKEDIEV 79
FEL +DF +KN +A + K I+V
Sbjct: 88 FELTRKDFLIKNYKKARKAKEKSGIDV 114
>Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical
protein ZK1251.9 protein.
Length = 1701
Score = 24.6 bits (51), Expect = 8.6
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 70 LLQNKEDIEVPEKQART 86
L+QN ED+E+ E+Q T
Sbjct: 490 LMQNNEDVELTEEQIHT 506
>Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical
protein ZK1251.9 protein.
Length = 1701
Score = 24.6 bits (51), Expect = 8.6
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 70 LLQNKEDIEVPEKQART 86
L+QN ED+E+ E+Q T
Sbjct: 490 LMQNNEDVELTEEQIHT 506
>Z66520-11|CAA91391.2| 600|Caenorhabditis elegans Hypothetical
protein F49E12.6 protein.
Length = 600
Score = 24.6 bits (51), Expect = 8.6
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 16 KKTIDDFNDMCPLLELMANKAMKPRHWQRIMEVTKYVFELDNE 58
K+ I D ++ L+ M WQ + + K +F+L NE
Sbjct: 136 KRRIYDIVNVMEALDAMQKTNKSYYQWQGLESLPKLMFDLQNE 178
>AF038615-2|AAB94145.1| 782|Caenorhabditis elegans Hypothetical
protein R02D3.4 protein.
Length = 782
Score = 24.6 bits (51), Expect = 8.6
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 6 LKEWPAFFALKKTIDDFNDMCPLLELMANK 35
++E P A + +D F++MC +LE+ +K
Sbjct: 691 VEEKPIVMAKEIKVDIFSNMCDMLEVKESK 720
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.136 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,212,594
Number of Sequences: 27539
Number of extensions: 79718
Number of successful extensions: 190
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 172
Number of HSP's gapped (non-prelim): 23
length of query: 89
length of database: 12,573,161
effective HSP length: 68
effective length of query: 21
effective length of database: 10,700,509
effective search space: 224710689
effective search space used: 224710689
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 51 (24.6 bits)
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