Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002147-TA|BGIBMGA002147-PA|IPR013602|Dynein heavy chain,
N-terminal region 2
(89 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 23 0.44
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 23 0.58
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 23 0.58
AF134818-1|AAD40234.1| 130|Apis mellifera lambda crystallin-lik... 21 3.1
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 20 5.4
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 19 7.1
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 19 7.1
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 19 7.1
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 19 7.1
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 19 9.4
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 19 9.4
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 23.4 bits (48), Expect = 0.44
Identities = 15/69 (21%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 22 FNDMC-PLLELMANKAMKPRHWQRIMEVTKYVFELDNEDFCLKNILEAPLLQNKEDIEVP 80
FND P+L+ ++ ++ W+ + V + E++N D L+ +++ Q E +
Sbjct: 365 FNDSGNPILKAKPSEVVQILGWKELPNVGDEILEVEN-DKILQEVIKFRQKQRAEILAKE 423
Query: 81 EKQARTRRI 89
K A +++
Sbjct: 424 HKAAADQKL 432
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 23.0 bits (47), Expect = 0.58
Identities = 11/22 (50%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 1 MDSTALKEWPAFFALKKTIDDF 22
M ST+L++ P FF++ KTI D+
Sbjct: 407 MWSTSLRD-PVFFSIYKTILDY 427
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 23.0 bits (47), Expect = 0.58
Identities = 11/22 (50%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 1 MDSTALKEWPAFFALKKTIDDF 22
M ST+L++ P FF++ KTI D+
Sbjct: 33 MWSTSLRD-PVFFSIYKTILDY 53
>AF134818-1|AAD40234.1| 130|Apis mellifera lambda crystallin-like
protein protein.
Length = 130
Score = 20.6 bits (41), Expect = 3.1
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 16 KKTIDDFNDMCPLLEL 31
+K ++ N+MCPL +L
Sbjct: 93 EKISNELNEMCPLEKL 108
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 19.8 bits (39), Expect = 5.4
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 48 VTKYVFELDNEDFC 61
+++YVF ED+C
Sbjct: 349 ISRYVFRSALEDYC 362
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 19.4 bits (38), Expect = 7.1
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 5 ALKEWPAFFALKKTIDDFNDMCP 27
A+ EW + L I +CP
Sbjct: 129 AIDEWDRLWVLDNGISGETSVCP 151
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 19.4 bits (38), Expect = 7.1
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 24 DMCPLLELMANKAMKP 39
D+C LL L+AN + P
Sbjct: 92 DLCMLLLLVANLIILP 107
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 19.4 bits (38), Expect = 7.1
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 24 DMCPLLELMANKAMKP 39
D+C LL L+AN + P
Sbjct: 92 DLCMLLLLVANLIILP 107
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 19.4 bits (38), Expect = 7.1
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 24 DMCPLLELMANKAMKP 39
D+C LL L+AN + P
Sbjct: 92 DLCMLLLLVANLIILP 107
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic
acetylcholine receptor alpha6subunit protein.
Length = 529
Score = 19.0 bits (37), Expect = 9.4
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 57 NEDFCLKNILEAPLLQNKEDIEV 79
NE N LE P+ E +EV
Sbjct: 60 NELLSSYNTLERPVANESEPLEV 82
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic
acetylcholine receptor alpha6subunit protein.
Length = 529
Score = 19.0 bits (37), Expect = 9.4
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 57 NEDFCLKNILEAPLLQNKEDIEV 79
NE N LE P+ E +EV
Sbjct: 60 NELLSSYNTLERPVANESEPLEV 82
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.322 0.136 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,269
Number of Sequences: 429
Number of extensions: 777
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of query: 89
length of database: 140,377
effective HSP length: 48
effective length of query: 41
effective length of database: 119,785
effective search space: 4911185
effective search space used: 4911185
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (20.1 bits)
S2: 37 (19.0 bits)
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