Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002146-TA|BGIBMGA002146-PA|undefined
(99 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A4LY05 Cluster: D-alanyl-D-alanine carboxypeptidase/D-a... 32 2.0
UniRef50_A7NU50 Cluster: Chromosome chr18 scaffold_1, whole geno... 32 2.0
UniRef50_Q97ZK9 Cluster: Valyl-tRNA synthetase; n=5; Sulfolobace... 32 2.0
UniRef50_UPI00004987EA Cluster: rRNA biogenesis protein; n=2; En... 31 3.5
UniRef50_Q6MMT0 Cluster: Putative uncharacterized protein precur... 31 3.5
UniRef50_A3DER3 Cluster: Putative uncharacterized protein; n=2; ... 31 4.6
UniRef50_Q1QA52 Cluster: Cytidylate kinase; n=4; Gammaproteobact... 31 6.0
UniRef50_A0XYV4 Cluster: Putative orphan protein; n=1; Alteromon... 30 8.0
>UniRef50_A4LY05 Cluster: D-alanyl-D-alanine
carboxypeptidase/D-alanyl-D-alanine-endopeptidase
precursor; n=1; Geobacter bemidjiensis Bem|Rep:
D-alanyl-D-alanine
carboxypeptidase/D-alanyl-D-alanine-endopeptidase
precursor - Geobacter bemidjiensis Bem
Length = 488
Score = 32.3 bits (70), Expect = 2.0
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 7 QDELPVNYIPDNAAGQIDIKGSIDEVNINNPIGNQSEVIAIQGYLTEAD 55
Q+ LP+ I ++ KGS E N+ GN V A+ GY T AD
Sbjct: 404 QESLPIAGIDGTLKNRM--KGSCAEGNVRGKTGNMKGVSALAGYATSAD 450
>UniRef50_A7NU50 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1026
Score = 32.3 bits (70), Expect = 2.0
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 24 DIKGSIDEVNINNPIGNQSEVIAIQGYLTEADILCIKIIEAVECESYVLWFIDF-LIQKD 82
D++ + N N IG S +GYLTE + IK+++ S+ +F + ++
Sbjct: 696 DLRMATGNFNQQNLIGKGSFGSVYKGYLTEGTAVAIKVLDIQRNGSWKSFFAECEALRTV 755
Query: 83 RKKN-YNYLTSCLLIDY 98
R +N +TSC +D+
Sbjct: 756 RHRNLVKLITSCSSLDF 772
>UniRef50_Q97ZK9 Cluster: Valyl-tRNA synthetase; n=5;
Sulfolobaceae|Rep: Valyl-tRNA synthetase - Sulfolobus
solfataricus
Length = 842
Score = 32.3 bits (70), Expect = 2.0
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 10 LPVNYIPDNAAGQIDIKGSIDEVNINNPIGNQSEVIAIQGYLTEADILCIKIIEAVECES 69
LP+ I D I+ G +D + I E++ +GYL + + + ++ VE S
Sbjct: 327 LPIKVIVDEKGRIINTNGILDGLKIEQARNKMIELLKTKGYLVKVEKIKHNVLSHVE-RS 385
Query: 70 YVLWFIDFLIQK 81
L ++FL++K
Sbjct: 386 DCLSPVEFLVKK 397
>UniRef50_UPI00004987EA Cluster: rRNA biogenesis protein; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: rRNA biogenesis
protein - Entamoeba histolytica HM-1:IMSS
Length = 1431
Score = 31.5 bits (68), Expect = 3.5
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 13 NYIPDNAAGQIDIKGSIDEVNINNPIGNQSEVIAIQGYLTEADILCIK 60
N I I+I +I+E+NIN N + I ++GY ++ +I IK
Sbjct: 1013 NSILKGKLNYIEIGDNIEEININKKEYNVGDKIKVKGYYSKENIYLIK 1060
>UniRef50_Q6MMT0 Cluster: Putative uncharacterized protein
precursor; n=1; Bdellovibrio bacteriovorus|Rep: Putative
uncharacterized protein precursor - Bdellovibrio
bacteriovorus
Length = 250
Score = 31.5 bits (68), Expect = 3.5
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 3 ILEKQDELPVNYIPDNAAGQIDIKGSIDEVNINNPIGNQSEVIAIQGY-LTEADILCIKI 61
+LE +LP N +P+ GQ G++ +V + + ++E + G E D K+
Sbjct: 86 VLEPSSKLPKNTLPEVRPGQPGFSGAVTQVLLEQVVVLEAENFNVAGVPEAEVDAAVAKV 145
Query: 62 IEAVECESY 70
+AV +Y
Sbjct: 146 EKAVAGRAY 154
>UniRef50_A3DER3 Cluster: Putative uncharacterized protein; n=2;
Clostridiaceae|Rep: Putative uncharacterized protein -
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Length = 192
Score = 31.1 bits (67), Expect = 4.6
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 8 DELPVNYIPDNAAGQIDIKGSIDEVNINNPIGNQSEVIAIQG 49
D P+ IP N Q+ I+G +D+ + N P+ N S I I G
Sbjct: 87 DIQPILLIPGNLTAQLVIRGVLDD-HTNVPVANYSARITING 127
>UniRef50_Q1QA52 Cluster: Cytidylate kinase; n=4;
Gammaproteobacteria|Rep: Cytidylate kinase -
Psychrobacter cryohalolentis (strain K5)
Length = 251
Score = 30.7 bits (66), Expect = 6.0
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 1 MAILEKQDELPVNYIPDNAAGQIDIKGSIDEVN---INNPIGNQSEVIAI 47
MA+L L + ++P+NA+G++DI + D V N +G + IA+
Sbjct: 78 MAVLALTQSLEIAFVPNNASGRVDIIVNGDAVGDQVRNETVGGYASQIAV 127
>UniRef50_A0XYV4 Cluster: Putative orphan protein; n=1;
Alteromonadales bacterium TW-7|Rep: Putative orphan
protein - Alteromonadales bacterium TW-7
Length = 228
Score = 30.3 bits (65), Expect = 8.0
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 9 ELPVNYIPDNAAGQIDIKGSIDEVNINNPIGNQSEVIAIQGYLTEADILCIKIIEAVECE 68
E V + D + Q ++ DE N Q+E A+Q +L AD+ I I EC+
Sbjct: 112 ESVVKQLRDPSDAQAALQAQFDEQQRNEEWAYQTET-ALQDFLLTADLASIPDIVTAECK 170
Query: 69 SYVLWF 74
+ V F
Sbjct: 171 TSVCKF 176
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.320 0.141 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,951,569
Number of Sequences: 1657284
Number of extensions: 4020243
Number of successful extensions: 8758
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 8756
Number of HSP's gapped (non-prelim): 8
length of query: 99
length of database: 575,637,011
effective HSP length: 76
effective length of query: 23
effective length of database: 449,683,427
effective search space: 10342718821
effective search space used: 10342718821
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 65 (30.3 bits)
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