Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002145-TA|BGIBMGA002145-PA|undefined
(115 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3627| Best HMM Match : DUF488 (HMM E-Value=8) 34 0.025
SB_15450| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.13
SB_12645| Best HMM Match : Laminin_EGF (HMM E-Value=3e-31) 32 0.13
SB_12578| Best HMM Match : DUF488 (HMM E-Value=9.4) 32 0.13
SB_40322| Best HMM Match : RVT_1 (HMM E-Value=7.4e-27) 32 0.13
SB_50872| Best HMM Match : AraC_E_bind (HMM E-Value=7.5) 31 0.17
SB_40188| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.17
SB_30951| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.17
SB_10577| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.17
SB_54734| Best HMM Match : RVT_1 (HMM E-Value=0.24) 31 0.17
SB_41518| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.17
SB_35035| Best HMM Match : Mic1 (HMM E-Value=5.3) 31 0.17
SB_32313| Best HMM Match : RnaseH (HMM E-Value=2.5) 31 0.17
SB_9947| Best HMM Match : Exo_endo_phos (HMM E-Value=1.2) 31 0.17
SB_34376| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.40
SB_24607| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.40
SB_7354| Best HMM Match : DUF488 (HMM E-Value=6.4) 30 0.40
SB_6945| Best HMM Match : FeThRed_A (HMM E-Value=9.1) 30 0.53
SB_17419| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.53
SB_11436| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.71
SB_56339| Best HMM Match : L51_S25_CI-B8 (HMM E-Value=8.8) 29 0.93
SB_53338| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.6
SB_21| Best HMM Match : NOC3p (HMM E-Value=0.0058) 27 5.0
SB_32510| Best HMM Match : LRR_1 (HMM E-Value=0.0053) 26 6.6
SB_35440| Best HMM Match : p450 (HMM E-Value=2.2e-35) 26 8.7
>SB_3627| Best HMM Match : DUF488 (HMM E-Value=8)
Length = 188
Score = 34.3 bits (75), Expect = 0.025
Identities = 25/76 (32%), Positives = 35/76 (46%)
Query: 2 HKDVRNERRSNQSVKLANPARDLLAQFVYEPLPYKSLVALFAVKFMSAQEPKGPVKAPIM 61
+KD+ + + VK AN L +P + LVA++ V S E GPV A I
Sbjct: 29 NKDLSWNKHVDYVVKKANKRLYALRLLKKSGVPVQDLVAIYCVLIRSVLEYAGPVWANIT 88
Query: 62 ERLPENVTKLSKRAAR 77
L + V + KRA R
Sbjct: 89 GFLVDIVEGIQKRALR 104
>SB_15450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 31.9 bits (69), Expect = 0.13
Identities = 23/63 (36%), Positives = 29/63 (46%)
Query: 15 VKLANPARDLLAQFVYEPLPYKSLVALFAVKFMSAQEPKGPVKAPIMERLPENVTKLSKR 74
VK AN L +P + LVA++ V S E GPV A I L + V + KR
Sbjct: 60 VKKANKRLYALRLLKKSGVPVQDLVAIYCVLIRSVVEYAGPVWANITGFLVDIVEGIQKR 119
Query: 75 AAR 77
A R
Sbjct: 120 ALR 122
>SB_12645| Best HMM Match : Laminin_EGF (HMM E-Value=3e-31)
Length = 541
Score = 31.9 bits (69), Expect = 0.13
Identities = 23/63 (36%), Positives = 29/63 (46%)
Query: 15 VKLANPARDLLAQFVYEPLPYKSLVALFAVKFMSAQEPKGPVKAPIMERLPENVTKLSKR 74
VK AN L +P + LVA++ V S E GPV A I L + V + KR
Sbjct: 275 VKKANKRLYALRLLKKSGVPVQDLVAIYCVLIRSVVEYAGPVWANITGFLVDIVEGIQKR 334
Query: 75 AAR 77
A R
Sbjct: 335 ALR 337
>SB_12578| Best HMM Match : DUF488 (HMM E-Value=9.4)
Length = 249
Score = 31.9 bits (69), Expect = 0.13
Identities = 23/63 (36%), Positives = 29/63 (46%)
Query: 15 VKLANPARDLLAQFVYEPLPYKSLVALFAVKFMSAQEPKGPVKAPIMERLPENVTKLSKR 74
VK AN L +P + LVA++ V S E GPV A I L + V + KR
Sbjct: 103 VKKANKRLYALRLLKKSGVPVQDLVAIYCVLIRSVVEYAGPVWANITGFLVDIVEGIQKR 162
Query: 75 AAR 77
A R
Sbjct: 163 ALR 165
>SB_40322| Best HMM Match : RVT_1 (HMM E-Value=7.4e-27)
Length = 710
Score = 31.9 bits (69), Expect = 0.13
Identities = 23/63 (36%), Positives = 29/63 (46%)
Query: 15 VKLANPARDLLAQFVYEPLPYKSLVALFAVKFMSAQEPKGPVKAPIMERLPENVTKLSKR 74
VK AN L +P + LVA++ V S E GPV A I L + V + KR
Sbjct: 617 VKKANKRLYALRLLKKSGVPVQDLVAIYCVLIRSVVEYAGPVWANITGFLVDIVEGIQKR 676
Query: 75 AAR 77
A R
Sbjct: 677 ALR 679
>SB_50872| Best HMM Match : AraC_E_bind (HMM E-Value=7.5)
Length = 206
Score = 31.5 bits (68), Expect = 0.17
Identities = 23/63 (36%), Positives = 29/63 (46%)
Query: 15 VKLANPARDLLAQFVYEPLPYKSLVALFAVKFMSAQEPKGPVKAPIMERLPENVTKLSKR 74
VK AN L +P + LVA++ V S E GPV A I L + V + KR
Sbjct: 60 VKKANKRLYALRLLKKSGVPVQDLVAIYCVLIRSVVEYAGPVWANIPGFLVDIVEGIQKR 119
Query: 75 AAR 77
A R
Sbjct: 120 ALR 122
>SB_40188| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 31.5 bits (68), Expect = 0.17
Identities = 22/63 (34%), Positives = 29/63 (46%)
Query: 15 VKLANPARDLLAQFVYEPLPYKSLVALFAVKFMSAQEPKGPVKAPIMERLPENVTKLSKR 74
VK AN L +P + L+A++ V S E GPV A I L + V + KR
Sbjct: 86 VKKANKRLYALRLLKKSGVPVQDLIAIYCVLIRSVGEYAGPVWANITGFLVDIVEGIQKR 145
Query: 75 AAR 77
A R
Sbjct: 146 ALR 148
>SB_30951| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 31.5 bits (68), Expect = 0.17
Identities = 22/63 (34%), Positives = 29/63 (46%)
Query: 15 VKLANPARDLLAQFVYEPLPYKSLVALFAVKFMSAQEPKGPVKAPIMERLPENVTKLSKR 74
VK AN L +P + L+A++ V S E GPV A I L + V + KR
Sbjct: 60 VKKANKRLYALRLLKKSGVPVQDLIAIYCVLIRSVVEYAGPVWANITGFLVDIVEGIQKR 119
Query: 75 AAR 77
A R
Sbjct: 120 ALR 122
>SB_10577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 31.5 bits (68), Expect = 0.17
Identities = 22/63 (34%), Positives = 29/63 (46%)
Query: 15 VKLANPARDLLAQFVYEPLPYKSLVALFAVKFMSAQEPKGPVKAPIMERLPENVTKLSKR 74
VK AN L +P + L+A++ V S E GPV A I L + V + KR
Sbjct: 32 VKKANKRLYALRLLKKSGVPVQDLIAIYCVLIRSVVEYAGPVWANITGFLVDIVEGIQKR 91
Query: 75 AAR 77
A R
Sbjct: 92 ALR 94
>SB_54734| Best HMM Match : RVT_1 (HMM E-Value=0.24)
Length = 299
Score = 31.5 bits (68), Expect = 0.17
Identities = 22/63 (34%), Positives = 29/63 (46%)
Query: 15 VKLANPARDLLAQFVYEPLPYKSLVALFAVKFMSAQEPKGPVKAPIMERLPENVTKLSKR 74
VK AN L +P + L+A++ V S E GPV A I L + V + KR
Sbjct: 194 VKKANKRLYALRLLKKSGVPVQDLIAIYCVLIRSVVEYAGPVWANITGFLVDIVEGIQKR 253
Query: 75 AAR 77
A R
Sbjct: 254 ALR 256
>SB_41518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 31.5 bits (68), Expect = 0.17
Identities = 22/63 (34%), Positives = 29/63 (46%)
Query: 15 VKLANPARDLLAQFVYEPLPYKSLVALFAVKFMSAQEPKGPVKAPIMERLPENVTKLSKR 74
VK AN L +P + L+A++ V S E GPV A I L + V + KR
Sbjct: 105 VKKANKRLYALRLLKKSGVPVQDLIAIYCVLIRSVVEYAGPVWANITGFLVDIVEGIQKR 164
Query: 75 AAR 77
A R
Sbjct: 165 ALR 167
>SB_35035| Best HMM Match : Mic1 (HMM E-Value=5.3)
Length = 235
Score = 31.5 bits (68), Expect = 0.17
Identities = 22/63 (34%), Positives = 29/63 (46%)
Query: 15 VKLANPARDLLAQFVYEPLPYKSLVALFAVKFMSAQEPKGPVKAPIMERLPENVTKLSKR 74
VK AN L +P + L+A++ V S E GPV A I L + V + KR
Sbjct: 89 VKKANKRLYALRLLKKSGVPVQDLIAIYCVLIRSVVEYAGPVWANITGFLVDIVEGIQKR 148
Query: 75 AAR 77
A R
Sbjct: 149 ALR 151
>SB_32313| Best HMM Match : RnaseH (HMM E-Value=2.5)
Length = 721
Score = 31.5 bits (68), Expect = 0.17
Identities = 23/63 (36%), Positives = 29/63 (46%)
Query: 15 VKLANPARDLLAQFVYEPLPYKSLVALFAVKFMSAQEPKGPVKAPIMERLPENVTKLSKR 74
VK AN L +P + LVA++ V S E GPV A I L + V + KR
Sbjct: 583 VKKANKRLYALRLLKKSGVPVQDLVAIYCVLIRSVVEYAGPVWANIPGFLVDIVEGIQKR 642
Query: 75 AAR 77
A R
Sbjct: 643 ALR 645
>SB_9947| Best HMM Match : Exo_endo_phos (HMM E-Value=1.2)
Length = 405
Score = 31.5 bits (68), Expect = 0.17
Identities = 22/63 (34%), Positives = 29/63 (46%)
Query: 15 VKLANPARDLLAQFVYEPLPYKSLVALFAVKFMSAQEPKGPVKAPIMERLPENVTKLSKR 74
VK AN L +P + L+A++ V S E GPV A I L + V + KR
Sbjct: 259 VKKANKRLYALRLLKKSGVPVQDLIAIYCVLIRSVVEYAGPVWANITGFLVDIVEGIQKR 318
Query: 75 AAR 77
A R
Sbjct: 319 ALR 321
>SB_34376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 30.3 bits (65), Expect = 0.40
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 33 LPYKSLVALFAVKFMSAQEPKGPVKAPIMERLPENVTKLSKRAAR 77
+P + LVA++ V S E GPV A I L + V + KRA R
Sbjct: 22 VPVQDLVAIYCVLIRSVVEYAGPVWANITGFLVDIVEGIQKRALR 66
>SB_24607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 30.3 bits (65), Expect = 0.40
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 33 LPYKSLVALFAVKFMSAQEPKGPVKAPIMERLPENVTKLSKRAAR 77
+P + LVA++ V S E GPV A I L + V + KRA R
Sbjct: 22 VPVQDLVAIYCVLIRSVVEYAGPVWANITGFLVDIVEGIQKRALR 66
>SB_7354| Best HMM Match : DUF488 (HMM E-Value=6.4)
Length = 116
Score = 30.3 bits (65), Expect = 0.40
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 33 LPYKSLVALFAVKFMSAQEPKGPVKAPIMERLPENVTKLSKRAAR 77
+P + LVA++ V S E GPV A I L + V + KRA R
Sbjct: 4 VPVQDLVAIYCVLIRSVVEYAGPVWANITGFLVDIVEGIQKRALR 48
>SB_6945| Best HMM Match : FeThRed_A (HMM E-Value=9.1)
Length = 207
Score = 29.9 bits (64), Expect = 0.53
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 33 LPYKSLVALFAVKFMSAQEPKGPVKAPIMERLPENVTKLSKRAAR 77
+P + LVA++ V S E GPV A I L + V + KRA R
Sbjct: 79 VPVQDLVAIYCVLIRSVVEYAGPVWANIPGFLVDIVEGIQKRALR 123
>SB_17419| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 679
Score = 29.9 bits (64), Expect = 0.53
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 2 HKDVRNERRSNQSVKLANPARDLLAQFVYEPLPYKSLVALFAVKFMSAQEPKG 54
++++ + R+N V L N + L A+F+Y PL SL ++ Q P G
Sbjct: 296 YQNLNSNHRANDIVVLENSPQVLTARFMYGPLDMVSLSGEKVDIYIMVQPPSG 348
>SB_11436| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 640
Score = 29.5 bits (63), Expect = 0.71
Identities = 22/63 (34%), Positives = 28/63 (44%)
Query: 15 VKLANPARDLLAQFVYEPLPYKSLVALFAVKFMSAQEPKGPVKAPIMERLPENVTKLSKR 74
VK AN L +P + LVA++ V E GPV A I L + V + KR
Sbjct: 522 VKKANKRLYALRLLKKSGVPVQDLVAIYCVLIRYVVEYAGPVWANITGFLVDIVEGIQKR 581
Query: 75 AAR 77
A R
Sbjct: 582 ALR 584
>SB_56339| Best HMM Match : L51_S25_CI-B8 (HMM E-Value=8.8)
Length = 132
Score = 29.1 bits (62), Expect = 0.93
Identities = 18/45 (40%), Positives = 23/45 (51%)
Query: 33 LPYKSLVALFAVKFMSAQEPKGPVKAPIMERLPENVTKLSKRAAR 77
+P + LVA++ V S E GPV A I L V + KRA R
Sbjct: 4 VPVQDLVAIYCVFIRSVVEYAGPVWANISGFLVHIVEGIQKRAPR 48
>SB_53338| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 331
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 76 ARCTASIFVNIYESVVTFLNDLAAIHFTTAELMRRRRHY 114
A C A + V+I ++ N +A + FTT++LMR+R +Y
Sbjct: 12 AWCFAYVVVSI---LIIVGNSVAIVIFTTSKLMRKRTNY 47
>SB_21| Best HMM Match : NOC3p (HMM E-Value=0.0058)
Length = 423
Score = 26.6 bits (56), Expect = 5.0
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Query: 7 NERRSNQSVKLANPARDLLAQFVYEPLPYKSLVALFAVKFMSAQEPK---GPVKAPIMER 63
N Q++ + + A P P S+V LFA + + E K + + IME
Sbjct: 171 NGENKRQALPTDTDSEEKAADAAPSPPPQLSVVDLFARRQLKLMEKKSLIAELSSKIMEN 230
Query: 64 LPENVTK 70
ENV+K
Sbjct: 231 PEENVSK 237
>SB_32510| Best HMM Match : LRR_1 (HMM E-Value=0.0053)
Length = 377
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 44 VKFMSAQEPKGPVKAPIMERLP-ENVTKLSKRAARCTASI 82
V S + + P KAP+++R P ++VTKL A T I
Sbjct: 8 VTLPSTKVAQPPGKAPLVQRTPQQSVTKLQPHAREGTPGI 47
>SB_35440| Best HMM Match : p450 (HMM E-Value=2.2e-35)
Length = 806
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/51 (33%), Positives = 22/51 (43%)
Query: 37 SLVALFAVKFMSAQEPKGPVKAPIMERLPENVTKLSKRAARCTASIFVNIY 87
+LV+L K S P GP P++ LP V L A A + IY
Sbjct: 275 NLVSLIKRKLSSLHLPPGPQPYPLVGNLPHLVGPLMPLAMTELAKKYGKIY 325
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.323 0.133 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,275,659
Number of Sequences: 59808
Number of extensions: 101020
Number of successful extensions: 322
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 299
Number of HSP's gapped (non-prelim): 25
length of query: 115
length of database: 16,821,457
effective HSP length: 73
effective length of query: 42
effective length of database: 12,455,473
effective search space: 523129866
effective search space used: 523129866
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 54 (25.8 bits)
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