Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002144-TA|BGIBMGA002144-PA|IPR013594|Dynein heavy chain,
N-terminal region 1
(1013 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA ... 754 0.0
AE014297-2908|AAF55834.2| 4496|Drosophila melanogaster CG3723-PA... 69 3e-11
AE013599-2240|AAF58022.1| 1227|Drosophila melanogaster CG9068-PA... 58 5e-08
AF210453-1|AAF21041.1| 4559|Drosophila melanogaster dynein heavy... 46 4e-04
AE014297-4235|AAF56793.2| 5106|Drosophila melanogaster CG1842-PA... 45 5e-04
AF313479-1|AAG29545.1| 4167|Drosophila melanogaster 1-beta dynei... 39 0.031
BT001748-1|AAN71503.1| 1267|Drosophila melanogaster RE74832p pro... 33 2.7
AY118684-1|AAM50544.1| 1001|Drosophila melanogaster AT11671p pro... 31 6.2
AY069745-1|AAL39890.1| 325|Drosophila melanogaster LP07727p pro... 31 6.2
AE014134-926|AAF52258.2| 1267|Drosophila melanogaster CG31989-PA... 31 6.2
AE013599-842|AAF58957.2| 325|Drosophila melanogaster CG2063-PA ... 31 6.2
>AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA
protein.
Length = 4671
Score = 754 bits (1865), Expect = 0.0
Identities = 358/601 (59%), Positives = 455/601 (75%), Gaps = 31/601 (5%)
Query: 39 MDPRLEFTFQLLIDGTGLPRHAIMDHVFEGNMLDDINQLFLPHMRNKLLWYYQDVEEIEQ 98
MDPRLEFTFQLLID T LPRH +MD++FEG+MLD+INQLFLP+M+NKLLW+YQ+ ++ E
Sbjct: 22 MDPRLEFTFQLLIDATQLPRHQLMDYIFEGDMLDEINQLFLPNMKNKLLWFYQETDDPEP 81
Query: 99 RPVPE--------------NTKSRQQGKQPPPQVTWK-RKLFLSDGWDVKFTGVCIYMFR 143
PVP+ ++K+ Q G P K +KLFL+DGW FTGVCIY+FR
Sbjct: 82 TPVPDPNKPGPSRSGVASSSSKTPQGGASPSGMPPPKHKKLFLTDGWTCAFTGVCIYIFR 141
Query: 144 INVSKQLPEEGFHKDLFCGILNAEKVGMVTAIERVMEHVYMSALAHPSSDGDEDETRFPI 203
+N SKQLPEEGF KDL+CG+++A+ +G+VT+IER++E V+M ALA PS +GDE++ +
Sbjct: 142 VNTSKQLPEEGFQKDLYCGVIDAKNIGLVTSIERIVEFVFMQALAFPSLEGDEEDVSCGL 201
Query: 204 VKNQLLPGLRSFCSALKVCEDVCNQVNLFEDGLALMAPIQDHTQLKDMAKNPNTITMLEE 263
+K QLLPGLRSFCSAL+VCE VC+ N+F DG + I ++KDM+KN LEE
Sbjct: 202 IKGQLLPGLRSFCSALRVCEQVCDHHNVFADGCDMFEKIDAVEEVKDMSKNQEFCAQLEE 261
Query: 264 RVTEWIKKVMEVASLLIFPNHAFNDQILSESEQLRREVDSSGPQDELEYWKKRGAQFSQL 323
RV W K ++ +IL ESEQLR+E D SGPQDELEYWKKRGAQFSQL
Sbjct: 262 RVNNWTKGIL---------------KILGESEQLRKENDHSGPQDELEYWKKRGAQFSQL 306
Query: 324 VSYLQENEVQLTLSCLQLANSKVIKQWRDTDHKITFCYNEAKDNAKFVQAMEKCCHSLYL 383
+++LQ+ EVQ TL CL LA S++IKQW++TD KITFCYNEA+DN+KF+QAME CCHSLYL
Sbjct: 307 LAHLQDKEVQFTLHCLFLAGSRIIKQWKETDRKITFCYNEARDNSKFIQAMETCCHSLYL 366
Query: 384 DDPVKIKDSILSLLQTVRLIHSVSQFYNTSERISSLMVKITNQMIETCKQYITCRFKDTI 443
DDPV +K+SILSLLQTVRLI+SVSQFYNTSER S+LMVKITNQMIETCK YITCR K+TI
Sbjct: 367 DDPVSMKESILSLLQTVRLIYSVSQFYNTSERTSALMVKITNQMIETCKSYITCRCKETI 426
Query: 444 WSQERSLVRDKLIHCINLNRTYRETYIFVKNHPFLPNTEQFSFSENYVFGKFDTFCKRLN 503
WSQ+R+++R KL +CI LN Y ETY V+ PFLPN F FSEN+VFGKFDTFC+RL+
Sbjct: 427 WSQDRNVIRTKLSNCIKLNHIYHETYYTVREQPFLPNQTPFGFSENFVFGKFDTFCERLS 486
Query: 504 KIIAMFDLTDDYNYLFEKRMXXXXXXXXXXXAVHTFEEAKKAVTTCQYDYLDYRNNEFDK 563
KII+MF+L DDYN+LFE+R+ A + FEEAKK VT+ +YDYLD+RN++F+
Sbjct: 487 KIISMFNLIDDYNHLFERRLEGLLLGEALEDASNHFEEAKKEVTSRKYDYLDHRNSDFNI 546
Query: 564 DYHAFEDKINALKESIGCTIEENFSSVWETPQGIKFLTRFEKVSQKIQITKLRRIKWSRC 623
D+ F K N+LK++I IE++F +VWETPQ I+FL RFEKVS+KI +T++ K++R
Sbjct: 547 DFERFIHKTNSLKDTIATLIEKDFDTVWETPQCIRFLVRFEKVSEKIPLTRMDE-KYTRI 605
Query: 624 L 624
L
Sbjct: 606 L 606
Score = 230 bits (563), Expect = 6e-60
Identities = 148/391 (37%), Positives = 206/391 (52%), Gaps = 46/391 (11%)
Query: 617 RIKWSRCLMQNMIEIVESVCAHPVLRGLPASADMMRKYTNTRTLMNNYEDMMKAVWMNQN 676
RI W R L ++ E++++V H VL LP + D+ +Y N ++ YED + ++W++Q+
Sbjct: 639 RIHWCRALSLHITELMDAVMEHVVLSSLPMAKDLDVRYHNVLGILQEYEDEIVSIWLDQD 698
Query: 677 LWDVDESLNNSLLKIDETGCVAVNLDKNIKLLIRESDCLVKMGVPLPIVCHSLYAKKYYF 736
+ D L LL + + + VNL I LLIRE+ L K+ + LPIV +L +++ YF
Sbjct: 699 VSVADACLLQPLLSL-QGDKLFVNLHPTIPLLIREAKMLAKLDIELPIVAATLMSRQQYF 757
Query: 737 TLVNDSLQFLLEDYLRTVRRVKLEVRPLFLPQXXXXXXXXXXXXXXXCWTSEGWKEFIDR 796
+ DSL L++ +L TVR VKLEVRPLFLPQ WT++ W EF +R
Sbjct: 758 ITIQDSLNCLIKMFLSTVRAVKLEVRPLFLPQLVRLTAMLKPGLHTINWTNQNWTEFYER 817
Query: 797 ANAAIKSFDVLVTRVHDIYTNRIIYMLSGMQEVTLITLPEETPWSVQEFVEKVESGCRNA 856
AI+SFDVLV HD E+ W+V EF+E+ E CR A
Sbjct: 818 CKQAIESFDVLV--AHD--------------EI----------WTVDEFLERSEEACRKA 851
Query: 857 CVELNRKSXXXXXXXXXXXXXXKKAA---QQIRPTEINPDFEFLIAEDDPQSSG------ 907
+ELNRKS +A ++I ++ F+ + D SG
Sbjct: 852 AIELNRKSQMVSEAVEEVLSLVDRATAAFKEIAGDDVITLFDAATPKGDNSGSGGRKPED 911
Query: 908 --------AASSTNESTSSG-QQDWSAVWECFESPHRLLSTPAGGLSKSMQEMVKNAVNE 958
AA ST+ G QQDWS +W CFE+P LLST L K MQ+MV NAV E
Sbjct: 912 GGGGGGGAAAPSTSGGGGGGQQQDWSILWSCFENPLSLLST-TESLPKGMQDMVCNAVVE 970
Query: 959 MRRYYSRKVVDVLIRVKRRTLDVIIKQFSSD 989
MRRYYSRKV+DVLI+V R LD + ++F +D
Sbjct: 971 MRRYYSRKVIDVLIKVIRAALDTLRRRFIAD 1001
>AE014297-2908|AAF55834.2| 4496|Drosophila melanogaster CG3723-PA
protein.
Length = 4496
Score = 69.3 bits (162), Expect = 3e-11
Identities = 70/337 (20%), Positives = 139/337 (41%), Gaps = 17/337 (5%)
Query: 261 LEERVTEWIKKVMEVASLLIFPNHAFNDQILSESEQLRREVDSSGPQDELEYWKKRGAQF 320
+E V +W ++ EV + P++AF + EV PQ +W R
Sbjct: 208 IEGVVIKWATQIHEV--IKESPSNAFANGQNPTPHTGEYEVAVVAPQ--FTFWNNRLKNL 263
Query: 321 SQLVSYLQENEVQLTLSCLQLANSKVIKQWRDTDHKITFCYNEAKDNAKFVQAMEKCCHS 380
S + L+ ++ L+ + S ++ + EAKD ++ +++
Sbjct: 264 SFIYDQLRNERIRAMALILEYSMSAYHPCFQTLFKNVVTALAEAKDITLYLNPLKRPLQH 323
Query: 381 LYLDDPVKIKDSILSLLQTVRLIHSVSQFYNTSERISSLMVKITNQMIETCKQYITCRFK 440
L D + K ++ + TV ++ S++Y S +I+ L+ +I N +I K+Y+
Sbjct: 324 LEEIDFAECKPLLIPFMNTVGILWGNSRYYCQSAKITVLLQEICNLIIHQAKRYLD---P 380
Query: 441 DTIWSQERSLVRDKLIHCINLNRTYRETYIFVKNH--PFLPNTEQ-----FSFSENYVFG 493
+I+ + +L I + + +RE + + K F E+ ++F N VF
Sbjct: 381 SSIFHSDIDEAMQRLTLSIQILKFFRELFDYYKERLATFFTEPEERPPILWTFHPNSVFK 440
Query: 494 KFDTFCKRLNKIIAMFDLTDDYNYLFEKRMXXXXXXXXXXXAVHTFEEAKK---AVTTCQ 550
+F+ F +RL I F ++ L + + + E + A +
Sbjct: 441 RFNAFLERLTTIQWFFFTVIEFLKLEKVEIGGLRGRQLSTRITDVYVEFNQYFTAFASKS 500
Query: 551 YDYLDYRNNEFDKDYHAFEDKINALKESIGCTIEENF 587
YD LD ++EFD+D+ F+ +I L + + + F
Sbjct: 501 YDVLDPDDHEFDEDFKGFQTRILELDMKLAAILCQAF 537
>AE013599-2240|AAF58022.1| 1227|Drosophila melanogaster CG9068-PA
protein.
Length = 1227
Score = 58.4 bits (135), Expect = 5e-08
Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 5/202 (2%)
Query: 307 QDELEYWKKRGAQFSQLVSYLQENEVQLTLSCLQLANSKVIKQWRDTDHKITFCYNEAKD 366
+DE E+W+ R + L ++VQ L L A S + Q + +++
Sbjct: 245 RDEFEFWEYRYEVLQGINDQLAHSDVQKVLLLLHNAQSVHMPQMDGLIERARKELHKSLS 304
Query: 367 NAKFVQAMEKCCHSL-YLDDPVKIKDSILSLLQTVRLIHSVSQFYNTSERISSLMVKITN 425
N K++ + + C + P + + ++ +R I S++YNT+ I++L ++N
Sbjct: 305 NIKYLHLLIEPCSKIDAATSPADLTKLLPRIIHLIRFIWLNSEYYNTTRLIAALFRNLSN 364
Query: 426 QMIETCKQYITCRFKDTIWSQERSLVRDKLIHCINLNRTYRETYIFVKNHPFLPNTEQ-F 484
Q+I C + + ++ + + R +R + I TYR Y + +T+ +
Sbjct: 365 QIIRFCTK--QTKVEEILSGKPRFGIRICNV-AIECCLTYRGIYDTISRDLAQKHTQMPW 421
Query: 485 SFSENYVFGKFDTFCKRLNKII 506
E +F D F +RLN +I
Sbjct: 422 ELDEGLIFNHIDAFVERLNDVI 443
>AF210453-1|AAF21041.1| 4559|Drosophila melanogaster dynein heavy
chain protein.
Length = 4559
Score = 45.6 bits (103), Expect = 4e-04
Identities = 53/292 (18%), Positives = 115/292 (39%), Gaps = 16/292 (5%)
Query: 306 PQDELEYWKKRGAQFSQLVSYLQENEVQLTLSCLQLANSKVIKQWRDTDHKITFCYNEAK 365
P+ +W+ R L L + ++ L+ S +R + EA+
Sbjct: 233 PEAIFSFWESRLENLENLAEQLGDRRIKTIGFVLEKIQSIFEHSYRRIVELVLESLAEAR 292
Query: 366 DNAKFVQAMEKCCHSLYLDDPVKIKDSILSLLQTVRLIHSVSQFYNTSERISSLMVKITN 425
D K + +++ +D + + I L+ T+ L+ S++++T I+ N
Sbjct: 293 DITKCLSPLKRKMDKFETNDMDENRSDIRPLMLTIGLVWGHSRYFHTLNNITLFFNLFHN 352
Query: 426 QMIETCKQYITCRFKDTIWSQERSLVRDKLI----HCINLNRTYRETYIFVKNHPFLP-- 479
+I+ + + D+I+ + KL H Y E +K
Sbjct: 353 SLIDCVNRTVE---PDSIFQGDVDEAYKKLDINMQHLEYYKLIYNECRNSLKKFKIGTTF 409
Query: 480 NTEQFSFSENYVFGKFDTFCKRLNKIIAMFDLTDDYNYLFEKRMXXXXXXXXXXXAVHTF 539
N++ +++ ++ +FG+ D F RL ++ +F+ D+ L EK + A+
Sbjct: 410 NSQDWTWHQDEIFGRLDKFLVRLEELKDLFNTVRDFQKL-EKIVMGGLKGRQITFALEKI 468
Query: 540 EEAKKAV----TTCQYDYL--DYRNNEFDKDYHAFEDKINALKESIGCTIEE 585
E ++ T QY+ + D N+ F +D +F+ + ++ + E+
Sbjct: 469 LEEYNSIYREWTNIQYNPIDPDAENSLFQRDRLSFKANTDVMERMVSFQFEK 520
>AE014297-4235|AAF56793.2| 5106|Drosophila melanogaster CG1842-PA
protein.
Length = 5106
Score = 45.2 bits (102), Expect = 5e-04
Identities = 35/177 (19%), Positives = 73/177 (41%), Gaps = 4/177 (2%)
Query: 300 EVDSSGPQDELEYWKKRGAQFSQLVSYLQENEVQLTLSCLQLANSKVIKQWRDTDHKITF 359
++D P E YW K + + L+ V L L S V+ +W+ K
Sbjct: 559 KLDDFTPMAEHRYWHKMEVELYGTLEQLKTEFVVAVLQRLTDDKSPVLDEWQAVVEKTEA 618
Query: 360 CYNEAKDNAKFVQAMEKCCHSLYLDDPVK-IKDSILSLLQTVRLIHSVSQFYNTSERISS 418
+ AK+N+ ++ + + + K + I +++ +R I ++S Y +
Sbjct: 619 RFKLAKENSDYLGTIIDYLEKVRSYESFKMVVLQIPNIMVGLRHIWTMSSHYCRDPEMQV 678
Query: 419 LMVKITNQMIETCKQYITCRFKDTIWSQERSLVRDKLIHCINLNRTYRETYIFVKNH 475
L+ +I+N ++ K I + I+ + + +C NL R +++ Y + H
Sbjct: 679 LLCQISNVFVQKVKSIINF---ENIFKYSATYTYETATNCANLLRCWKQAYKLSRQH 732
>AF313479-1|AAG29545.1| 4167|Drosophila melanogaster 1-beta dynein
protein.
Length = 4167
Score = 39.1 bits (87), Expect = 0.031
Identities = 49/258 (18%), Positives = 97/258 (37%), Gaps = 16/258 (6%)
Query: 386 PVKIKDSILSLLQTVRLIHSVSQFYNTSERISSLMVKITNQMIETCKQYITCRFKDTIWS 445
P + I + +R I S+ YN + I+ + ++NQ+I C + + + I S
Sbjct: 1 PTFVSQLIPRTIHLIRFIWLNSEQYNRRDLITGIFRNLSNQIIRFCTEKVNV---EKILS 57
Query: 446 QERSLVRDKLIHCINLNRTYRETY-IFVKNHPFLPNTEQFSFSENYVFGKFDTFCKRLNK 504
CI+ TY+ Y I K H + +S +F D F +RLN
Sbjct: 58 GSSRFGIKICNMCIDCCLTYKGIYDIMSKTHAKINIRIGWSLDNAMIFNHVDAFMERLND 117
Query: 505 II------AMFDLTDDYNYLFEKRMXXXXXXXXXXXAVHTFEEAKKAVTTCQYD----YL 554
+I +F D+ + + + A + E +T D L
Sbjct: 118 VIDICESMMVFGRLDESESIPKPQFGGTSGTEFEATADNVENEFLVTLTALCTDSKEIIL 177
Query: 555 DYRNNEFDKDYHAFEDKINALKESIGCTIEENFSSVWETPQGIKFLT--RFEKVSQKIQI 612
+ NE+ ++ + + +++E++ + F + + ++ L F I+
Sbjct: 178 NVHKNEWYEEVIKYRRTVQSMEETVQRLMSNVFQHICNVEEALESLNVMIFYSYRSTIRK 237
Query: 613 TKLRRIKWSRCLMQNMIE 630
T LR++ + N I+
Sbjct: 238 TFLRQVSSAWVFFSNEID 255
>BT001748-1|AAN71503.1| 1267|Drosophila melanogaster RE74832p
protein.
Length = 1267
Score = 32.7 bits (71), Expect = 2.7
Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Query: 320 FSQLVSYLQENEVQLTLSCLQLANSKVIKQWRDTDHKITFCYNEAKDNAKFVQAMEKCCH 379
F+QL+ + ++ ++ S IK W+ D K+ Y D F + + C
Sbjct: 301 FTQLIDKYPDIVNRILHFYIECVVSNPIKAWKSNDEKVAIGYAAKYDRVLFTKCNKSCAD 360
Query: 380 SLYLDDPVKIKDSILSLLQTVRLIHSV 406
Y+ + VK D++ ++ + LI +
Sbjct: 361 --YVLEAVKADDAVGIQIRALDLIEKI 385
>AY118684-1|AAM50544.1| 1001|Drosophila melanogaster AT11671p
protein.
Length = 1001
Score = 31.5 bits (68), Expect = 6.2
Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Query: 320 FSQLVSYLQENEVQLTLSCLQLANSKVIKQWRDTDHKITFCYNEAKDNAKFVQAMEKCCH 379
F QL+ + ++ ++ S IK W+ D K+ Y D F + + C
Sbjct: 35 FIQLIDKYPDIVNRILHFYIECVVSNPIKAWKSNDEKVAIGYAAKYDRVLFTKCNKSCAD 94
Query: 380 SLYLDDPVKIKDSILSLLQTVRLIHSV 406
Y+ + VK D++ ++ + LI +
Sbjct: 95 --YVLEAVKADDAVGIQIRALDLIEKI 119
>AY069745-1|AAL39890.1| 325|Drosophila melanogaster LP07727p
protein.
Length = 325
Score = 31.5 bits (68), Expect = 6.2
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 879 KKAAQQIRPTEINPDFEFLIAEDDPQSSGAASSTNESTSSGQQDWSAVWECFESPHRLLS 938
KK A+++R D + LI+++D + AASS+ E +SSG + S+ + +SP
Sbjct: 58 KKRAKKVRRLVSYQD-DTLISDED-EDRAAASSSEEESSSGDESNSSNSQSEDSPKAKDK 115
Query: 939 TPAGGLSK 946
+ AG SK
Sbjct: 116 SNAGSGSK 123
>AE014134-926|AAF52258.2| 1267|Drosophila melanogaster CG31989-PA
protein.
Length = 1267
Score = 31.5 bits (68), Expect = 6.2
Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Query: 320 FSQLVSYLQENEVQLTLSCLQLANSKVIKQWRDTDHKITFCYNEAKDNAKFVQAMEKCCH 379
F QL+ + ++ ++ S IK W+ D K+ Y D F + + C
Sbjct: 301 FIQLIDKYPDIVNRILHFYIECVVSNPIKAWKSNDEKVAIGYAAKYDRVLFTKCNKSCAD 360
Query: 380 SLYLDDPVKIKDSILSLLQTVRLIHSV 406
Y+ + VK D++ ++ + LI +
Sbjct: 361 --YVLEAVKADDAVGIQIRALDLIEKI 385
>AE013599-842|AAF58957.2| 325|Drosophila melanogaster CG2063-PA
protein.
Length = 325
Score = 31.5 bits (68), Expect = 6.2
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 879 KKAAQQIRPTEINPDFEFLIAEDDPQSSGAASSTNESTSSGQQDWSAVWECFESPHRLLS 938
KK A+++R D + LI+++D + AASS+ E +SSG + S+ + +SP
Sbjct: 58 KKRAKKVRRLVSYQD-DTLISDED-EDRAAASSSEEESSSGDESNSSNSQSEDSPKAKDK 115
Query: 939 TPAGGLSK 946
+ AG SK
Sbjct: 116 SNAGSGSK 123
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.321 0.135 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,498,509
Number of Sequences: 52641
Number of extensions: 1863095
Number of successful extensions: 5203
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 5179
Number of HSP's gapped (non-prelim): 25
length of query: 1013
length of database: 24,830,863
effective HSP length: 92
effective length of query: 921
effective length of database: 19,987,891
effective search space: 18408847611
effective search space used: 18408847611
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 67 (31.1 bits)
- SilkBase 1999-2023 -