GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002143-TA|BGIBMGA002143-PA|undefined
         (175 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094969-1|AAM11322.1| 1226|Drosophila melanogaster SD08167p pro...    47   1e-05
AE014298-2508|AAF48686.2| 1226|Drosophila melanogaster CG4937-PA...    47   1e-05
AE014298-2507|ABI30987.1| 1510|Drosophila melanogaster CG4937-PB...    47   1e-05

>AY094969-1|AAM11322.1| 1226|Drosophila melanogaster SD08167p protein.
          Length = 1226

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 3/71 (4%)

Query: 107  YIGHEPKRNPQTRWAITFIPRNKEK--RSKEKPWFGKTIAGAVTEDQLKWMSALMFAEH- 163
            Y+G E KR+    WAITF+ R + +  RS++ P+ G  +AG+   D+  W S++ +  + 
Sbjct: 1155 YLGCERKRDFPWSWAITFVERTQAQIMRSRDAPFIGHVLAGSEWGDRTIWYSSIWYCLYR 1214

Query: 164  TSILPTPRLVI 174
             +ILP   ++I
Sbjct: 1215 DNILPPAEIII 1225


>AE014298-2508|AAF48686.2| 1226|Drosophila melanogaster CG4937-PA,
            isoform A protein.
          Length = 1226

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 3/71 (4%)

Query: 107  YIGHEPKRNPQTRWAITFIPRNKEK--RSKEKPWFGKTIAGAVTEDQLKWMSALMFAEH- 163
            Y+G E KR+    WAITF+ R + +  RS++ P+ G  +AG+   D+  W S++ +  + 
Sbjct: 1155 YLGCERKRDFPWSWAITFVERTQAQIMRSRDAPFIGHVLAGSEWGDRTIWYSSIWYCLYR 1214

Query: 164  TSILPTPRLVI 174
             +ILP   ++I
Sbjct: 1215 DNILPPAEIII 1225


>AE014298-2507|ABI30987.1| 1510|Drosophila melanogaster CG4937-PB,
            isoform B protein.
          Length = 1510

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 3/71 (4%)

Query: 107  YIGHEPKRNPQTRWAITFIPRNKEK--RSKEKPWFGKTIAGAVTEDQLKWMSALMFAEH- 163
            Y+G E KR+    WAITF+ R + +  RS++ P+ G  +AG+   D+  W S++ +  + 
Sbjct: 1439 YLGCERKRDFPWSWAITFVERTQAQIMRSRDAPFIGHVLAGSEWGDRTIWYSSIWYCLYR 1498

Query: 164  TSILPTPRLVI 174
             +ILP   ++I
Sbjct: 1499 DNILPPAEIII 1509


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.326    0.137    0.473 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,751,560
Number of Sequences: 52641
Number of extensions: 309057
Number of successful extensions: 856
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 853
Number of HSP's gapped (non-prelim): 3
length of query: 175
length of database: 24,830,863
effective HSP length: 80
effective length of query: 95
effective length of database: 20,619,583
effective search space: 1958860385
effective search space used: 1958860385
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 59 (27.9 bits)