Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002141-TA|BGIBMGA002141-PA|IPR001849|Pleckstrin-like
(567 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0228 + 15903452-15903812,15904153-15904202,15904615-159047... 41 0.002
05_03_0276 - 11485123-11485136,11486549-11487557 33 0.61
02_05_0455 - 29154374-29155136,29155257-29156455,29156904-291570... 33 0.80
11_01_0283 - 2095291-2095566,2095962-2096348,2096523-2096881,209... 32 1.1
05_01_0324 + 2549354-2549482,2550092-2550493,2550789-2551727 32 1.4
03_06_0146 - 31976538-31978643,31978653-31978751 32 1.4
02_01_0611 - 4567839-4568144,4568280-4569209,4569301-4569566,456... 31 2.5
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 31 3.2
01_02_0007 + 10132380-10133201 31 3.2
04_04_0200 - 23529497-23531938,23532586-23533720,23534272-235344... 30 4.3
04_04_0039 + 22316171-22316273,22317124-22317824,22317924-223180... 30 4.3
11_04_0458 - 17923596-17923805,17924034-17924950,17925044-17925236 30 5.7
09_04_0543 - 18442571-18443111,18443232-18443426,18443507-184440... 30 5.7
06_03_0882 + 25638649-25639575,25639717-25639770,25639792-25639806 30 5.7
05_07_0257 + 28719980-28720220,28721412-28721455,28722521-287225... 30 5.7
05_05_0230 - 23476919-23477372,23477656-23477695,23478578-234787... 30 5.7
04_04_0260 + 23996775-23996865,23997031-23997566,23998407-239988... 30 5.7
01_06_0701 - 31320580-31320617,31321227-31321515 30 5.7
09_06_0220 + 21644642-21647293 29 7.5
07_03_1160 - 24430240-24431268 29 7.5
07_03_0091 + 13312904-13313647 29 7.5
05_04_0172 + 18718661-18718930,18719410-18720252,18720326-187203... 29 7.5
01_06_0641 - 30782235-30782423,30782498-30782605,30782848-307829... 29 7.5
12_02_0856 + 23708234-23708420,23709364-23709567,23709689-237099... 29 9.9
12_02_0046 + 12830974-12832386 29 9.9
11_04_0474 + 18162538-18163731,18163800-18163855,18163951-181640... 29 9.9
11_04_0313 + 16270807-16272271,16272713-16274140,16274289-16274788 29 9.9
01_05_0283 - 20354065-20354154,20354579-20354890,20355566-203557... 29 9.9
>12_02_0228 +
15903452-15903812,15904153-15904202,15904615-15904713,
15907146-15907415,15908045-15908125,15909033-15909599,
15909677-15910053,15910326-15911613
Length = 1030
Score = 41.1 bits (92), Expect = 0.002
Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 1/113 (0%)
Query: 250 RQNSMYENWTLPFQAKKENKTKDVELVTENTSRPSKSTIYEFDPLHKSSTSSKYQGVSNE 309
+ +S+ + ++PFQ ++ ++ + + S S + F P S++ QG SN
Sbjct: 745 QSSSITTSGSVPFQFSSQSSSESSLAGQDKSKAASSSAPFSFSPQFGSTSPFAGQGKSNS 804
Query: 310 LLLLESFLTGDTYGTIVSNDTNDDKFNFDESDYFNPPTPPE-RFDSLFPEEKP 361
+ + L+G + +S T+ N S+ NP + P F S P P
Sbjct: 805 VSSQSTLLSGSQFSNSLSAQTSTSNSNLLSSEKVNPGSSPSFAFGSSAPGSSP 857
>05_03_0276 - 11485123-11485136,11486549-11487557
Length = 340
Score = 33.1 bits (72), Expect = 0.61
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 180 DDMSLFSNHSDTNTDTVSNFSHDSRELDDNSNEHLTYDTPKPSRTNS 226
D + +N S+TN D +N +H S + D+SN+ +DT K S +S
Sbjct: 289 DGRNTDNNPSNTNGDDTTN-NHGSCPISDHSNQACNFDTEKDSNCDS 334
>02_05_0455 -
29154374-29155136,29155257-29156455,29156904-29157011,
29157129-29157314,29157761-29157859,29159613-29159773,
29160856-29160913
Length = 857
Score = 32.7 bits (71), Expect = 0.80
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 387 DETKQSNSVIQRFSRRLKLDNVLNKSTKQTLPKIEVVERPP---VHTQPVP 434
DE K + + R L+ + LN S Q + +VVE PP +H QP+P
Sbjct: 785 DEAKGCSMKLLHLLRDLRRTDQLNNSCSQEVVVTDVVEGPPDSSIHKQPIP 835
>11_01_0283 -
2095291-2095566,2095962-2096348,2096523-2096881,
2097275-2097398,2097480-2097548,2098536-2098584,
2099185-2099299,2099823-2099872,2099969-2100106,
2101136-2101197,2102066-2102180,2103433-2103664,
2103748-2103826,2103925-2103993,2104079-2104171,
2104577-2104622,2105223-2105268,2105354-2105411,
2105577-2105615,2105712-2105783,2105930-2106021,
2106824-2106923
Length = 889
Score = 32.3 bits (70), Expect = 1.1
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 345 PPTPPERFDSLFPEEKPTERVQNRDKNSNWFVSDSDSKSITEDETKQS 392
PP PP R ++L EKP+ V D++ + FV D S+ E QS
Sbjct: 582 PPPPPPRNNNLSKNEKPSAPVARADED-DIFVGDGVYYSVPNKEMSQS 628
>05_01_0324 + 2549354-2549482,2550092-2550493,2550789-2551727
Length = 489
Score = 31.9 bits (69), Expect = 1.4
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 329 DTNDDKFNFDESDYFNPPTPPERFDSLFPEEKPTERVQN 367
D++DDK N ++D P P RF+S+ E+ ++R +N
Sbjct: 356 DSDDDKDNVFDNDVDAPDEHPRRFESMRSEKSRSDRSRN 394
>03_06_0146 - 31976538-31978643,31978653-31978751
Length = 734
Score = 31.9 bits (69), Expect = 1.4
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 154 EQKRYKNEDDTETADIPPLQLNARHLDDMSLFSNHSDTNTDTVSNFSHDSRELDDNSNEH 213
E+ Y+ E D E D ++ + D++ F++ + DT S SHD +LDD+ +E
Sbjct: 238 EESDYEEEIDDEEIDDESVEEDINLDDELMGFASGLFGDDDTES--SHDEEDLDDDDDES 295
Query: 214 LTYD 217
L D
Sbjct: 296 LDDD 299
>02_01_0611 -
4567839-4568144,4568280-4569209,4569301-4569566,
4569662-4569970,4570497-4570647,4570958-4571012,
4571137-4571512,4571560-4571797,4571878-4572096,
4572629-4572910
Length = 1043
Score = 31.1 bits (67), Expect = 2.5
Identities = 37/146 (25%), Positives = 60/146 (41%), Gaps = 8/146 (5%)
Query: 76 IIDGSRFARGTLEKTITTSRAVRDSVTKSVIEGTRSAGLKLRRSTKPDSIEEPDQRCVSM 135
I DG+ + L T R + D V E +A LK+ ++KP ++E D+ + +
Sbjct: 519 ISDGALVSAAVLSDRYITGRFLPDKAIDLVDEA--AAKLKMEITSKPIELDEVDREIIRL 576
Query: 136 PVVDVSLFDNIQFHSPLLEQKRYKNEDDTETADIPPLQLNARHLDDMSLFS--NHSDTNT 193
+ +SL ++ S +Q+ K E D E+ L+ + SL + T
Sbjct: 577 EMEKLSLKNDTDKAS---KQRLSKLEADLESLKQKQKNLSEHWEYEKSLMTRIRSIKEET 633
Query: 194 DTVS-NFSHDSRELDDNSNEHLTYDT 218
D V+ RE D N L Y T
Sbjct: 634 DRVNLEIEAAEREYDLNRAAELKYGT 659
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 30.7 bits (66), Expect = 3.2
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 345 PPTPPERFDSLFPEEKPTERVQNRDKNSNWFVSDSDSKSITEDETK 390
PP PP+ + FP+ PTE ++ + +++ S+S + K
Sbjct: 386 PPAPPKATMARFPKLSPTESSRSEESSASELASESSETEVNAPRAK 431
>01_02_0007 + 10132380-10133201
Length = 273
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 5 PIPKPRSAFLPQNDPLKQPVPLPRTKVPP 33
P P+P+ LPQ +P QP PLP+ + P
Sbjct: 52 PNPRPQPQPLPQPNPNPQPQPLPQPQPQP 80
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 5 PIPKPRSAFLPQNDPLKQPVPLPRTKVPP 33
P P P LPQ +P QP+P P PP
Sbjct: 110 PQPNPNPQPLPQPNPNPQPLPQPDPNAPP 138
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 5 PIPKPRSAFLPQNDPLKQPVPLP 27
P P+P+ LPQ P QP+PLP
Sbjct: 78 PQPQPQPQPLPQPQPQPQPLPLP 100
>04_04_0200 -
23529497-23531938,23532586-23533720,23534272-23534463,
23535527-23535570
Length = 1270
Score = 30.3 bits (65), Expect = 4.3
Identities = 26/107 (24%), Positives = 40/107 (37%), Gaps = 2/107 (1%)
Query: 267 ENKTKDVELVTENTSRPSKSTIYEFDPLHKSSTSSKYQGVSNELLLLESFLTGDTYGTIV 326
E+ ++D E T + +P++ST Y + SK G+S + +
Sbjct: 468 EHTSEDEEESTMHVQKPTESTSYGGSETIRQWVGSKRSGLSKNCAREVTDKASKSITPGT 527
Query: 327 SNDTNDDKFNFDESDYFNPPTPPERFDSLFPEEKPTERVQNRDKNSN 373
FD+S + +PPE F S PEE N D N
Sbjct: 528 KKLARSSIRGFDDSQISD--SPPEAFSSQPPEEMTITSEANDDDERN 572
>04_04_0039 +
22316171-22316273,22317124-22317824,22317924-22318010,
22318361-22318420,22318971-22319912,22320678-22320723,
22320889-22321010
Length = 686
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 262 FQAKKENKTKDVELVTENTSRPSKSTI---YEFDPLHKSSTSSKYQGVSNELLL 312
FQ + V E+TS P+ + Y +PL K + K +GV+N L L
Sbjct: 371 FQVLSREQNGTVNTAKESTSNPASPVLGRSYSVEPLRKPIVNQKLKGVANGLPL 424
>11_04_0458 - 17923596-17923805,17924034-17924950,17925044-17925236
Length = 439
Score = 29.9 bits (64), Expect = 5.7
Identities = 18/83 (21%), Positives = 30/83 (36%)
Query: 152 LLEQKRYKNEDDTETADIPPLQLNARHLDDMSLFSNHSDTNTDTVSNFSHDSRELDDNSN 211
+ +KR K D + PP++ HLD + S + T T F+ S
Sbjct: 1 MTREKRQKASQDVSCDESPPIRFPRGHLDKEKVVEGGSGSGTRTSPRFTRQSSNRPVQIR 60
Query: 212 EHLTYDTPKPSRTNSIVSFGSFP 234
+ + P R + F + P
Sbjct: 61 DGDSGSRENPVRLYKTLGFDTTP 83
>09_04_0543 -
18442571-18443111,18443232-18443426,18443507-18444045,
18444205-18444375,18444794-18445219
Length = 623
Score = 29.9 bits (64), Expect = 5.7
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 172 LQLNARHLDDMSLFSNHSDTNTDTVSNFSHDSRELDDNSNEHLTYDTPKPSRTNSI-VSF 230
LQ + + D++ N +D++ +H S E DD +N++ P P+ + + +S
Sbjct: 220 LQSSFTAVKDITDEKNIKTKTSDSMFGDNHSSDEQDDETNQNGENSMPPPNHRSGVPLSH 279
Query: 231 GSFPEIPERRKNRESVEVMRQNSMYEN 257
+ PE+ +NR S S+++N
Sbjct: 280 TNDPEV-NVLENRGSQTCHNSASLWDN 305
>06_03_0882 + 25638649-25639575,25639717-25639770,25639792-25639806
Length = 331
Score = 29.9 bits (64), Expect = 5.7
Identities = 12/35 (34%), Positives = 24/35 (68%)
Query: 376 VSDSDSKSITEDETKQSNSVIQRFSRRLKLDNVLN 410
V+DS S+++ D K+S+++I+ F R ++L + N
Sbjct: 191 VTDSTSRAVVGDRCKESDALIRAFDRSMELASGFN 225
>05_07_0257 +
28719980-28720220,28721412-28721455,28722521-28722590,
28722693-28722816,28723420-28724060,28725100-28725364,
28725434-28725713,28726042-28726209,28726867-28727358,
28727432-28727689
Length = 860
Score = 29.9 bits (64), Expect = 5.7
Identities = 22/109 (20%), Positives = 46/109 (42%), Gaps = 2/109 (1%)
Query: 104 SVIEGTRSAGLKLRRSTKPDSIEE-PDQRCVSMPVVDVSLFDNIQFHSPLLEQK-RYKNE 161
S + GT A + L+ + + + D + V + ++N +P ++ +
Sbjct: 426 SFVSGTLDAPVSLKTANGDEEVAAVSDNHSIDQSDVRIHEYENKDTVAPAADEHVASSTK 485
Query: 162 DDTETADIPPLQLNARHLDDMSLFSNHSDTNTDTVSNFSHDSRELDDNS 210
DTE D+ P+Q D+ N++ N + S+++ S D+S
Sbjct: 486 SDTENVDVAPVQQPELRTADLIDVPNNTMYNNLSTSDYATPSAVQPDSS 534
>05_05_0230 -
23476919-23477372,23477656-23477695,23478578-23478700,
23479114-23479151,23479289-23479674,23479875-23481053,
23481805-23481928,23482733-23482779
Length = 796
Score = 29.9 bits (64), Expect = 5.7
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 113 GLKLRRSTKPDSIEEPDQRCVSMPVVDVSLFDNIQFHSPLLEQKRYKNEDDTETADIPPL 172
G++ +T+P + P ++ VS+P + S F + +P L R + + T D P
Sbjct: 363 GVRSTSNTEPSAASAPVKK-VSVPAMSRSKFSDAPSRTPTLTNGRQNRQSERSTVDSQPS 421
Query: 173 QLN 175
+++
Sbjct: 422 KVS 424
>04_04_0260 +
23996775-23996865,23997031-23997566,23998407-23998892,
23998989-23999152,23999220-23999281,23999753-23999907,
24000625-24000738,24001701-24002233,24002512-24002609,
24003108-24003398,24003764-24003830,24003905-24003983
Length = 891
Score = 29.9 bits (64), Expect = 5.7
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 332 DDKFNFDESDYFNPPTPPERFDSLFPEEKPTERVQNRDKNSNWFVSDSDSKSITEDETKQ 391
DD N D+ D++ PP D + + V+++D + D D + + + K+
Sbjct: 800 DDSDNSDDPDFWVPPVGSRWDDDDGKDRWTSSPVKDKDDAAEDEDGDDDGDDMADKDDKE 859
Query: 392 SNSVIQRFSRRLKLDNV 408
+ + R ++RL ++ V
Sbjct: 860 TREIASR-TKRLSVEAV 875
>01_06_0701 - 31320580-31320617,31321227-31321515
Length = 108
Score = 29.9 bits (64), Expect = 5.7
Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 8/90 (8%)
Query: 272 DVELVTENTSRPSKSTIYEFDPLHKSSTSSKYQGVSNELLLLESFLTGDTYGTIVSNDTN 331
D V+ PS YE S SS + E FL+G + SND
Sbjct: 13 DTAAVSSQEGAPSSGMRYELQAASCCSASSSGASLFGPCSRSEEFLSGASSTAGASND-- 70
Query: 332 DDKFNFDESDYFNPPTPPERFDSLFPEEKP 361
D++ E+D P T P+ P+E+P
Sbjct: 71 DEEEELMEADVLWPDTAPQ------PDEQP 94
>09_06_0220 + 21644642-21647293
Length = 883
Score = 29.5 bits (63), Expect = 7.5
Identities = 28/137 (20%), Positives = 50/137 (36%), Gaps = 6/137 (4%)
Query: 196 VSNFSHDSRELDDNSNEHLTYDTPKPSRTNSIVSFGSFPEIPERRKNRESVEVMRQNSMY 255
+ +F D L + P+P V FPE K VE +N +
Sbjct: 351 IDDFKLDEPSLPSLAEAKQEQKEPEPPEPEEKVDDSEFPEFDVVDKG---VEGQEENVVE 407
Query: 256 ENWTLPFQAKKENKTKDVELVTENTSRPSKSTIYEFDPLHKSSTSSKYQGVSNELLLLES 315
+AK+E + + K ++ D H + ++ + ++N++ LES
Sbjct: 408 AKGAAEEEAKEEKAAAEEAPTSAAGDEVVKEVVH--DSAH-AWRINELEAITNQIKALES 464
Query: 316 FLTGDTYGTIVSNDTND 332
+ GD + DT D
Sbjct: 465 MMLGDAPAAGKTEDTRD 481
>07_03_1160 - 24430240-24431268
Length = 342
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 2 DTPPIPKPRSAFLPQNDPLKQPVPLPRTKVPP 33
D PP+PKP +P P P P+ PP
Sbjct: 87 DVPPMPKPDGPPIPPVQPCPDQPPQPKPDGPP 118
>07_03_0091 + 13312904-13313647
Length = 247
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 5 PIPKPRSAFLPQNDPLKQPVPLPRTKVPPNDR 36
P PKP P+ DP P P P+ PN +
Sbjct: 146 PNPKPTPQLDPKQDPQPNPQPSPKADPKPNPK 177
>05_04_0172 +
18718661-18718930,18719410-18720252,18720326-18720354,
18720439-18720529,18720625-18720779,18721552-18721662,
18722579-18722645
Length = 521
Score = 29.5 bits (63), Expect = 7.5
Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 7/107 (6%)
Query: 201 HDSRELDDNSNEHLTYDTPKPSR----TNSIVSFGSFPEIPERRKNRESVEVMRQNSMYE 256
H + DD S+ P+P R ++ GS P I + K+ E + ++ E
Sbjct: 64 HGTPSRDDASSASSPPPPPRPPRRPFESSKGEENGSLPSIAQMDKSEEDAPTIPKSHPGE 123
Query: 257 NWTLPFQAKKENKTKDVELVTENTSRPSKSTIYEFDPLHKSSTSSKY 303
TLP + N+ +DV+++ T+ ++ + + P H S+ ++
Sbjct: 124 GATLP--SSHINRDQDVDVLQNATAVNNRVEVNQ-SPNHSDSSRPRF 167
>01_06_0641 -
30782235-30782423,30782498-30782605,30782848-30782959,
30783429-30783526,30784249-30784336,30784780-30784875,
30785101-30785171,30786003-30786075,30787023-30787324,
30787418-30787503,30788024-30788084,30789386-30789688
Length = 528
Score = 29.5 bits (63), Expect = 7.5
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 262 FQAKKENKTKDVELVTENTSRPSKSTIYEFDPLHKSSTSSKYQGVSNELLLLE 314
F +K+ NK KDV L+ + P+KS E HK + ++ + +++ LE
Sbjct: 266 FDSKERNKKKDVVLLDDEDMEPAKSINVEM--AHKWTDLETFELICSDIECLE 316
>12_02_0856 +
23708234-23708420,23709364-23709567,23709689-23709918,
23710174-23710174,23710268-23710788
Length = 380
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/54 (29%), Positives = 21/54 (38%)
Query: 338 DESDYFNPPTPPERFDSLFPEEKPTERVQNRDKNSNWFVSDSDSKSITEDETKQ 391
DES P + P PT D + +W VSD + + EDE Q
Sbjct: 8 DESSAATPDPGRGKKRPPSPSTPPTPSDDGEDSDDSWAVSDEEEEEEEEDEEDQ 61
>12_02_0046 + 12830974-12832386
Length = 470
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 3 TPPIPKPRSAFLPQNDPLKQPVPLPRTKVPP 33
TP P P A P P+++P LPR ++ P
Sbjct: 168 TPQEPAPPLAHAPAPAPIQEPAALPRQELAP 198
>11_04_0474 +
18162538-18163731,18163800-18163855,18163951-18164011,
18164107-18165495,18166024-18166635,18166706-18166852,
18166941-18167209,18167322-18167412,18167500-18167757,
18168376-18168450,18168937-18168945
Length = 1386
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 205 ELDDNSNEHLTYDTPKPSRTNSIVSFGSFPEIPERRKNRESVEVMRQNSMYENW 258
+ D+NS T D+ P + +G+ P P+R E VE + NS Y+++
Sbjct: 507 DYDENSLPSPTRDSKPPFDVPKPIGYGALPMAPDRPSVLERVEPAK-NSSYQSF 559
>11_04_0313 + 16270807-16272271,16272713-16274140,16274289-16274788
Length = 1130
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 222 SRTNSIVSFGSFPEIPERRKNRESVEVMRQNSMY 255
SR S+V FG+F ++P R NR ++ + ++
Sbjct: 898 SRMGSVVPFGAFLDVPNRCPNRVEARALQPSRVF 931
>01_05_0283 -
20354065-20354154,20354579-20354890,20355566-20355763,
20356371-20356754,20357445-20357858,20359771-20360022
Length = 549
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 5 PIPKPRSAFLPQNDPLKQPVPLPRTKVPPNDRGSASEILRSISSVSKQLTE 55
P P+P+S PQ P QP P P+ P A ++ +++Q+TE
Sbjct: 41 PQPQPQSEPEPQQQPQPQPQPQPQ----PEAEAEAEAEAKAADVLARQVTE 87
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.312 0.128 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,800,995
Number of Sequences: 37544
Number of extensions: 726684
Number of successful extensions: 2358
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 2258
Number of HSP's gapped (non-prelim): 118
length of query: 567
length of database: 14,793,348
effective HSP length: 86
effective length of query: 481
effective length of database: 11,564,564
effective search space: 5562555284
effective search space used: 5562555284
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 62 (29.1 bits)
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