GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002141-TA|BGIBMGA002141-PA|IPR001849|Pleckstrin-like
         (567 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    27   0.35 
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    27   0.35 
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    27   0.35 
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    26   0.81 
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    26   0.81 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    25   1.4  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    25   1.4  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    25   1.4  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   5.7  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      23   7.5  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   9.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   9.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   9.9  

>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 27.1 bits (57), Expect = 0.35
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 318 TGDTYGTIVSNDTNDDKFNFDESDYFNPPTPPERFDSLFPEE 359
           TG   G +  N  N+  F F    Y  PP  P RF +  P E
Sbjct: 10  TGKLCGKVGKNFNNEAFFCFHGIPYAKPPIGPLRFKAPQPAE 51


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 27.1 bits (57), Expect = 0.35
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 318 TGDTYGTIVSNDTNDDKFNFDESDYFNPPTPPERFDSLFPEE 359
           TG   G +  N  N+  F F    Y  PP  P RF +  P E
Sbjct: 10  TGKLCGKVGKNFNNEAFFCFHGIPYAKPPIGPLRFKAPQPAE 51


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 27.1 bits (57), Expect = 0.35
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 318 TGDTYGTIVSNDTNDDKFNFDESDYFNPPTPPERFDSLFPEE 359
           TG   G +  N  N+  F F    Y  PP  P RF +  P E
Sbjct: 9   TGKLCGKVGKNFNNEAFFCFHGIPYAKPPIGPLRFKAPQPAE 50


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 25.8 bits (54), Expect = 0.81
 Identities = 15/42 (35%), Positives = 17/42 (40%)

Query: 318 TGDTYGTIVSNDTNDDKFNFDESDYFNPPTPPERFDSLFPEE 359
           TG   G +  N  N   F F    Y  PP  P RF +  P E
Sbjct: 10  TGKLCGKVGKNFNNKAFFCFHGIPYAKPPIGPLRFKAPQPAE 51


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 25.8 bits (54), Expect = 0.81
 Identities = 15/42 (35%), Positives = 17/42 (40%)

Query: 318 TGDTYGTIVSNDTNDDKFNFDESDYFNPPTPPERFDSLFPEE 359
           TG   G +  N  N   F F    Y  PP  P RF +  P E
Sbjct: 10  TGKLCGKVGKNFNNKAFFCFHGIPYAKPPIGPLRFKAPQPAE 51


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 12/44 (27%), Positives = 20/44 (45%)

Query: 516 IRNTPRKILFSCASASERRHWAQKFVEHLTNNFSTNHTSEITRC 559
           +RN  +   F     +E     + +VE L  +   NH++ IT C
Sbjct: 201 LRNGEKHHSFPFRKTTEIPPEPEDYVEDLVGHIEVNHSAPITTC 244


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 11/21 (52%), Positives = 15/21 (71%)

Query: 271 KDVELVTENTSRPSKSTIYEF 291
           +DVELV  +T + +KS IY F
Sbjct: 86  EDVELVLTDTKQNTKSFIYHF 106


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 11/21 (52%), Positives = 15/21 (71%)

Query: 271 KDVELVTENTSRPSKSTIYEF 291
           +DVELV  +T + +KS IY F
Sbjct: 86  EDVELVLTDTKQNTKSFIYHF 106


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 9/23 (39%), Positives = 11/23 (47%)

Query: 345 PPTPPERFDSLFPEEKPTERVQN 367
           PP P E  DS  P+  P  +  N
Sbjct: 215 PPPPEEDDDSNIPQNNPKNKQHN 237


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 10/42 (23%), Positives = 20/42 (47%)

Query: 398 RFSRRLKLDNVLNKSTKQTLPKIEVVERPPVHTQPVPYFSGI 439
           R + ++++         Q  P I V++ P    +P+P F+ I
Sbjct: 25  RLNSKIQVSGASTTDECQVTPVIHVLQYPGCVPKPIPSFACI 66


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 1/25 (4%)

Query: 1   MDTPPIPKPRSAFLPQNDPLKQPVP 25
           ++ PP PKPR   + +  P + P P
Sbjct: 247 LENPPTPKPRPTKVSRRKP-RPPRP 270


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 16/66 (24%), Positives = 27/66 (40%)

Query: 262 FQAKKENKTKDVELVTENTSRPSKSTIYEFDPLHKSSTSSKYQGVSNELLLLESFLTGDT 321
           F+    N  K+  + T   +   K+  Y F    K++     Q V +E  +LE F+    
Sbjct: 154 FRLMSNNLNKNNVVATGRFTFHKKNLYYSFYISDKAARPRSLQFVDSEGNILEEFVLSRA 213

Query: 322 YGTIVS 327
            G + S
Sbjct: 214 GGLVNS 219


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 10/26 (38%), Positives = 17/26 (65%)

Query: 295  HKSSTSSKYQGVSNELLLLESFLTGD 320
            HK  TS+++  VSN + L ++F+  D
Sbjct: 1528 HKKKTSTEWIQVSNNVKLGQNFVLLD 1553


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.312    0.128    0.365 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,332
Number of Sequences: 317
Number of extensions: 6154
Number of successful extensions: 27
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 18
length of query: 567
length of database: 114,650
effective HSP length: 60
effective length of query: 507
effective length of database: 95,630
effective search space: 48484410
effective search space used: 48484410
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 45 (22.2 bits)