Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002141-TA|BGIBMGA002141-PA|IPR001849|Pleckstrin-like
(567 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g06850.1 68414.m00730 bZIP transcription factor, putative con... 35 0.17
At5g21280.1 68418.m02555 hydroxyproline-rich glycoprotein family... 34 0.22
At4g10070.1 68417.m01647 KH domain-containing protein DNA-direct... 33 0.51
At2g27350.3 68415.m03293 OTU-like cysteine protease family prote... 33 0.67
At1g59890.1 68414.m06747 paired amphipathic helix repeat-contain... 32 0.89
At3g29380.1 68416.m03691 transcription factor IIB (TFIIB) family... 32 1.2
At4g26630.1 68417.m03837 expressed protein 31 2.7
At1g65280.1 68414.m07402 DNAJ heat shock N-terminal domain-conta... 31 2.7
At1g41870.1 68414.m04835 hypothetical protein 31 2.7
At4g39160.1 68417.m05546 myb family transcription factor contain... 30 3.6
At3g50620.1 68416.m05535 nodulation protein-related contains wea... 30 3.6
At3g27330.1 68416.m03418 zinc finger (C3HC4-type RING finger) fa... 30 3.6
At5g67470.1 68418.m08507 formin homology 2 domain-containing pro... 30 4.7
At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp... 30 4.7
At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp... 30 4.7
At5g06740.1 68418.m00762 lectin protein kinase family protein co... 30 4.7
At1g43700.1 68414.m05020 VirE2-interacting protein (VIP1) identi... 30 4.7
At1g21660.1 68414.m02711 expressed protein low similarity to SP|... 30 4.7
At5g52140.1 68418.m06472 zinc finger protein-related 29 6.2
At4g18740.2 68417.m02770 expressed protein 29 6.2
At4g18740.1 68417.m02769 expressed protein 29 6.2
At3g60920.1 68416.m06815 beige/BEACH domain-containing protein c... 29 6.2
At5g67360.1 68418.m08494 cucumisin-like serine protease (ARA12) ... 29 8.3
At5g02040.2 68418.m00125 prenylated rab acceptor (PRA1) family p... 29 8.3
At5g02040.1 68418.m00124 prenylated rab acceptor (PRA1) family p... 29 8.3
At1g21630.1 68414.m02708 calcium-binding EF hand family protein ... 29 8.3
At1g20790.1 68414.m02603 F-box family protein contains Pfam:PF00... 29 8.3
>At1g06850.1 68414.m00730 bZIP transcription factor, putative
contains Pfam profile: PF00170 bZIP transcription
factor
Length = 337
Score = 34.7 bits (76), Expect = 0.17
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 2 DTPPIPKPRSAFLPQNDPLKQPVPLP 27
D PP+PKP + +P +DP+ P+P
Sbjct: 5 DPPPVPKPGATIIPSSDPIPNADPIP 30
>At5g21280.1 68418.m02555 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 302
Score = 34.3 bits (75), Expect = 0.22
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 5/121 (4%)
Query: 171 PLQLNARHLDDMSLFSNHSDTNTDTVSNFSHDSRELDDNSNEHLTYDTPKPSRTNSIVSF 230
PL LN D S T++ + S+ S S + +N H+ Y +P P T + +
Sbjct: 139 PLGLNLNFQDFNDFIQTSSTTSSSSSSSTSSSSSSIFP-TNPHI-YSSPSPPPTFTTATS 196
Query: 231 GSFPEIPERRKNRESVEVMRQNSMYENWTLPFQAKKENKTKDVELVTENTSRPSKSTIYE 290
S P++P +V S T+ + K E T++V +V E+ P S + E
Sbjct: 197 DSAPQLPSSSNGENNVVTSAWWSELMLKTVEPEIKPE--TEEV-IVVEDDVFPKFSDVME 253
Query: 291 F 291
F
Sbjct: 254 F 254
>At4g10070.1 68417.m01647 KH domain-containing protein DNA-directed
RNA polymerase (EC 2.7.7.6) II largestchain - mouse,
PIR2:A28490
Length = 725
Score = 33.1 bits (72), Expect = 0.51
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 161 EDDTETADIPPLQLNARHLDDMSLFSNHSDTNTDTVSNFSHDSRELDDNSNEHLTYDTPK 220
E+D PP+ L R LD++ L N D + T + +L+D + + L Y +
Sbjct: 3 EEDFVVISTPPVDLK-RKLDEVELNGNIVDDSNQTSDSSQAKRAKLEDEAQDGLDYGNTQ 61
Query: 221 PSRTNSIVSFGSFPEIPERRKNRESVEVMRQN-SMYENWTLPFQA-KKENKTKDVELVTE 278
+ GS E+ E + +E E + + + E P A + ENK V+ T+
Sbjct: 62 EN--------GSSMEVKEEEQLQEPKEENQDSVPLVEEVQDPIHADESENKICSVDQPTD 113
Query: 279 NTSRP 283
+ +P
Sbjct: 114 DQVKP 118
>At2g27350.3 68415.m03293 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 506
Score = 32.7 bits (71), Expect = 0.67
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 5/125 (4%)
Query: 166 TADIPPLQLNARHLDDM-SLFSNHSDTNTDTVSNFSHDSRELDDNSNEHLTYDTPKPSRT 224
+ D PP++L+ H + SL H T + S R +D + +
Sbjct: 317 STDTPPIRLSYHHGNHYNSLVDPHRLTVGAGLGFSSLSGRHVDKEQVKAAIKAQQEHQID 376
Query: 225 NSIVSFGSFP---EIPERRKNRESVEVMRQNSMYENWTLPFQAKKENKTKDVELVTENTS 281
N++++ G F E+ E+ R +E R + E W+ P KE+ T + E + +
Sbjct: 377 NALLAEGRFYSDLELTEKEIERSVMEASRAEYLME-WSKPRIGPKESSTSNAETSSSGAT 435
Query: 282 RPSKS 286
PS S
Sbjct: 436 GPSGS 440
>At1g59890.1 68414.m06747 paired amphipathic helix repeat-containing
protein similar to transcription co-repressor Sin3
[Xenopus laevis] GI:4960210; contains Pfam profile
PF02671: Paired amphipathic helix repeat
Length = 1159
Score = 32.3 bits (70), Expect = 0.89
Identities = 30/146 (20%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 142 LFDNIQFHSPLLEQKRYKNED--DTETADIPPLQLNARHLDDMSLFSNHSDTNTDTVSNF 199
++ + + H+ L + +Y E+ TE +D ++L L+ M + S+T +T+
Sbjct: 542 IYTDTKVHTDLYKLIKYYCEEICATEQSD-KVMKLWVTFLEPMFGVPSRSET-IETMK-- 597
Query: 200 SHDSRELDDNSNEHLTYDTPKPSRTNSIVSFGSFPEIPERRKNRESVEVMRQNSMYENWT 259
D +++DN H + K + + ++ P P + N+E+ + + +
Sbjct: 598 --DVAKIEDNQEHHDASEAVKENTCDGSMASNLKPLTPPKMPNKENPMIQGSSFAQDLPV 655
Query: 260 LPFQAKKENKTKDVELVTENTSRPSK 285
++ +++K DV +T S+PSK
Sbjct: 656 NTGESIQQDKLHDVAAITNEDSQPSK 681
>At3g29380.1 68416.m03691 transcription factor IIB (TFIIB) family
protein contains Pfam profile: PF00382 transcription
factor TFIIB repeat
Length = 336
Score = 31.9 bits (69), Expect = 1.2
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
Query: 311 LLLESFLT--GDTYGTIVSNDTNDDKFNFDESDYFNPPTPPERFDSLFPEEKPT-ERVQN 367
L+LE+ + + T S+D + D+ NP ++ + K T V +
Sbjct: 31 LVLEAHIIEYSQEWRTFASDDNHSDRDPNRVGAATNPFLKSGDLVTIIEKPKETASSVLS 90
Query: 368 RDKNSNWFVSDSDSKSITEDETKQSNSVIQRFSRRLKLDNVLNKSTKQTLPKIE 421
+D S F + + K+ ED KQ+ IQR + L LD V+N + + K +
Sbjct: 91 KDDISTLFRAHNQVKNHEEDLIKQAFEEIQRMTDALDLDIVINSRACEIVSKYD 144
>At4g26630.1 68417.m03837 expressed protein
Length = 763
Score = 30.7 bits (66), Expect = 2.7
Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 1/114 (0%)
Query: 162 DDTETADIPPLQLNARHLDDMSLFSNHSDTNTDTVSNFSHDSRELDDNSNEHLTYDTPKP 221
DD + + ++ N D+ + +T ++ H +D +E + K
Sbjct: 116 DDGVSVEDTVMKENVESKDNNYAKDDEKETKETDITEADHKKAGKEDIQHEADKANGTKD 175
Query: 222 SRTNSIVSFGSFPEIPERRKNRESVEVMRQNSMYENWT-LPFQAKKENKTKDVE 274
T I G+ + + E VE +N EN + K+ENKTK+VE
Sbjct: 176 GNTGDIKEEGTLVDEDKGTDMDEKVENGDENKQVENVEGKEKEDKEENKTKEVE 229
>At1g65280.1 68414.m07402 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profile PF00226
DnaJ domain
Length = 598
Score = 30.7 bits (66), Expect = 2.7
Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 2/105 (1%)
Query: 189 SDTNTDTVSNFSHDSRELDDNSNEHLTYDTPKPSRTNSIVSFGSFPEIPERRKNRESVEV 248
SD+ DT S+ + S + ++ + K + GS+ E+R+ RE
Sbjct: 9 SDSGDDTPSSATSSSSSYSSDESDSSSRKWRKKQKERRKSDGGSYER--EKRRKREKERK 66
Query: 249 MRQNSMYENWTLPFQAKKENKTKDVELVTENTSRPSKSTIYEFDP 293
++ E + KK+ K ++ E TE+ S + E DP
Sbjct: 67 RKKIERKERKRRDMKKKKKTKKREYESDTESYSGSDSFSDQEDDP 111
>At1g41870.1 68414.m04835 hypothetical protein
Length = 355
Score = 30.7 bits (66), Expect = 2.7
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 7/56 (12%)
Query: 79 GSRFARGTLEKTIT-------TSRAVRDSVTKSVIEGTRSAGLKLRRSTKPDSIEE 127
GSR TLEKTIT + + ++ S +G +S+ L + ST DS+ E
Sbjct: 110 GSRIQHQTLEKTITLACHTDLQNHSTPRTINDSTFDGAKSSELDTKASTTNDSVHE 165
>At4g39160.1 68417.m05546 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 545
Score = 30.3 bits (65), Expect = 3.6
Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 9/127 (7%)
Query: 84 RGTLEKTITTSRAVRDSVTKSVIEGTRSAGLKLRRSTKPDSIEEPDQRCVSMPVVDVSLF 143
R T K TS S K+ + + + + +R+ + + +E PD S+P+ D+
Sbjct: 254 RATSRKRKKTSEEPNKSSEKTEQKKFKHSSRRQKRTLEKELLETPDHEIRSLPLRDM--- 310
Query: 144 DNIQFHSPLLEQKRYKNEDDTETADIPPLQLNARHLDDMSLFSNHSDTNTDTVSNFSHDS 203
L+E K + + + + A + P Q + S + + D +F +S
Sbjct: 311 ------LRLVEYKEWMQKKEAKGAGVQPSQESNNMNGSGSQYHSQGFDEEDEFGDFGIES 364
Query: 204 RELDDNS 210
E +N+
Sbjct: 365 SEYQENN 371
>At3g50620.1 68416.m05535 nodulation protein-related contains weak
similarity to nodulation protein H (EC 2.8.2.-)
(Host-specificity of nodulation protein D)
(Swiss-Prot:P06237) [Rhizobium meliloti]
Length = 340
Score = 30.3 bits (65), Expect = 3.6
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 4/107 (3%)
Query: 413 TKQTLPKIEVVERPPVHTQPVPYFSGILM-KIVSGVVEDLFKNSQSRYCVLSDQKLMCYT 471
T+ PK + R PV YF+ + M + SG E L NS + V S+ ++
Sbjct: 75 TRIHYPKPQTFNRAECGHNPVRYFAILSMQRSGSGWFETLL-NSHNN--VSSNGEIFSVL 131
Query: 472 DPTNSILKEAYTLDNIYSIQIVLPLSSSTTSNSYCFELSVSSGGIRN 518
D +I TLD +Y++ S + S + F+ ++ G + N
Sbjct: 132 DRRKNISSIIQTLDRVYNLDWFTSASKNECSAAIGFKWMLNQGLLEN 178
>At3g27330.1 68416.m03418 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles: PF00097 zinc
finger, C3HC4 type (RING finger), PF01697 Domain of
unknown function
Length = 913
Score = 30.3 bits (65), Expect = 3.6
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 88 EKTITTSRAVRDSVTKSVIEGTRSAGLKLRRSTKPDSIEEPDQRC----VSMPVVDVSLF 143
E I S V D+ +S + R + L L +ST P +QR V +PV+D+
Sbjct: 613 EDLIIASFVVDDTPERSSSKRRRRSNL-LFKSTPPSGSSRRNQRVKQSLVPLPVIDL--- 668
Query: 144 DNIQFHSP--LLEQKRYKNEDDTETADIPPLQLNARHLDD 181
D + H E+K+ K E +TET + + + + L D
Sbjct: 669 DKVIRHEEEKSAEKKKKKREMETETKEEKKIDKDEKSLSD 708
>At5g67470.1 68418.m08507 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 899
Score = 29.9 bits (64), Expect = 4.7
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Query: 5 PIPKPRSAFLPQNDPLKQPVPLP-RTKVPPNDRGSASEILRSISSVSKQLTEDVXXXXXX 63
P+P PR + P P P P P PP R ++LR +++ S+ T
Sbjct: 365 PVPPPRRSPPPLQTPPPPPPPPPLAPPPPPQKRPRDFQMLRKVTN-SEATTNSTTSPSRK 423
Query: 64 XXXXXNEKIEKSIIDGSRFARGTLEKT 90
K++ + + + G+LEK+
Sbjct: 424 QAFKTPSPKTKAVEEVNSVSAGSLEKS 450
>At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 844
Score = 29.9 bits (64), Expect = 4.7
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 321 TYGTIVSNDTNDDKFNFDESDYFNPPTPPERFDSLFPEEKPTERVQNRDKNSNWFVSDSD 380
+YG+ S+D ND K D F+PP P D L PTE++ ++ FVS
Sbjct: 110 SYGS--SSDVNDQKNAADMESGFHPPFPVP--DYLRQNLPPTEKLHQIITRTSSFVSKHG 165
Query: 381 SKSITEDETKQSNS 394
+S KQ ++
Sbjct: 166 GQSEIVLRVKQGDN 179
>At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 843
Score = 29.9 bits (64), Expect = 4.7
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 321 TYGTIVSNDTNDDKFNFDESDYFNPPTPPERFDSLFPEEKPTERVQNRDKNSNWFVSDSD 380
+YG+ S+D ND K D F+PP P D L PTE++ ++ FVS
Sbjct: 110 SYGS--SSDVNDQKNAADMESGFHPPFPVP--DYLRQNLPPTEKLHQIITRTSSFVSKHG 165
Query: 381 SKSITEDETKQSNS 394
+S KQ ++
Sbjct: 166 GQSEIVLRVKQGDN 179
>At5g06740.1 68418.m00762 lectin protein kinase family protein
contains Legume lectins beta-chain signature,
PROSITE:PS00307 and Serine/Threonine protein kinases
active-site signature, PROSITE:PS00108
Length = 652
Score = 29.9 bits (64), Expect = 4.7
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 531 SERRHWA-QKFVEHLTNNFSTNHTSEITRCGWCYLKEK 567
SE+ H Q+F+ +T + NH + + GWCY +++
Sbjct: 360 SEKSHQGKQEFIAEITTIGNLNHRNLVKLLGWCYERKE 397
>At1g43700.1 68414.m05020 VirE2-interacting protein (VIP1) identical
to VirE2-interacting protein VIP1 GB:AAF37279 GI:7258340
from [Arabidopsis thaliana]
Length = 341
Score = 29.9 bits (64), Expect = 4.7
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 314 ESFLTGDTYGTIVSNDTNDDKFNFDESDYFNPPTPPERFDSLFPEEKPTERVQNRDKNSN 373
E+F +G++ ++ D +D +F D+ N P PP++ P+ P V + + +SN
Sbjct: 36 ETFFSGESIDDLLLFDPSD--IDFSSLDFLNAPPPPQQSQQQ-PQASPMS-VDSEETSSN 91
Query: 374 WFV 376
V
Sbjct: 92 GVV 94
>At1g21660.1 68414.m02711 expressed protein low similarity to
SP|O14976 Cyclin G-associated kinase (EC 2.7.1.-) {Homo
sapiens}; supporting cDNA gi|20466222|gb|AY099577.1|
Length = 523
Score = 29.9 bits (64), Expect = 4.7
Identities = 21/106 (19%), Positives = 45/106 (42%), Gaps = 3/106 (2%)
Query: 284 SKSTIYEFDPLHKSSTSSKYQGVSNELLLLESFLTGDTYGTIVSNDTNDDKF--NFDESD 341
+ ++++ D + + S+ + VSN+ + + G + NDD F NF
Sbjct: 63 TNGSLFDGDDIFFPANSTNRK-VSNDFDVFAGLNKSSSSGDNSKSSLNDDLFFSNFGNPG 121
Query: 342 YFNPPTPPERFDSLFPEEKPTERVQNRDKNSNWFVSDSDSKSITED 387
P + + F + P K ++ V+N D ++ S+ + +D
Sbjct: 122 KTTPSSADDLFGGVIPGSKSSDSVKNDDLFGSFSSSEKQYAAAVDD 167
>At5g52140.1 68418.m06472 zinc finger protein-related
Length = 277
Score = 29.5 bits (63), Expect = 6.2
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 168 DIPPLQLNARHLDDMSLFSNHSDTNTDTVSNFSHDSRELDDNSNEHLTYD 217
D P H DD FS T+T + S+ SH+ + ++N E++TY+
Sbjct: 134 DAPSSSRAIFHYDDGENFSGRY-THTHSPSSISHNPTDDENNDPENMTYE 182
>At4g18740.2 68417.m02770 expressed protein
Length = 214
Score = 29.5 bits (63), Expect = 6.2
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 357 PEEKPTERVQNRDKNSNWFVSDSDSKSITEDETKQSNSVIQRFSRRLKLDNVLNKSTKQT 416
P + E + + K +S +S+ + E++ +S + ++ + LD VL KS K+T
Sbjct: 90 PSKSNQEEIISLLKRIQSSISKGESRGVEEEKNSDESSKEKPLTKAI-LD-VLEKSRKKT 147
Query: 417 LPKIEVVERPPVHTQPVP 434
V E+PP +P
Sbjct: 148 EGDTSVKEKPPKRQVELP 165
>At4g18740.1 68417.m02769 expressed protein
Length = 245
Score = 29.5 bits (63), Expect = 6.2
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 357 PEEKPTERVQNRDKNSNWFVSDSDSKSITEDETKQSNSVIQRFSRRLKLDNVLNKSTKQT 416
P + E + + K +S +S+ + E++ +S + ++ + LD VL KS K+T
Sbjct: 90 PSKSNQEEIISLLKRIQSSISKGESRGVEEEKNSDESSKEKPLTKAI-LD-VLEKSRKKT 147
Query: 417 LPKIEVVERPPVHTQPVP 434
V E+PP +P
Sbjct: 148 EGDTSVKEKPPKRQVELP 165
>At3g60920.1 68416.m06815 beige/BEACH domain-containing protein
contains Pfam PF02138: Beige/BEACH domain; similar to LBA
isoform gamma (GI:10257405) [Mus musculus]; similar to
beige-like protein (CDC4L) - Homo sapiens; similar to
Neurobeachin: kinase A-anchoring, beige/Chediak-higashi
protein homolog implicated in neuronal membrane traffic
(AKAP550) (GI:11863541) [Drosophila melanogaster].
Length = 1928
Score = 29.5 bits (63), Expect = 6.2
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 7/109 (6%)
Query: 187 NHSDTNTDTVSNFSHDSRELDDNSNEHLTYDTPKPSRTNSIVSFGSFPEIPERRKNRESV 246
N +D NT VS+FS+ + + ++ TP + TN I + S E + S+
Sbjct: 1816 NTTDPNTHMVSSFSNPTTSETEPDSDMNIVSTPSNATTNQIDTESS--EAANYENSNSSI 1873
Query: 247 EVMRQNSMYENWTLPFQAKKENKTKDVELVTENTSRP---SKSTIYEFD 292
+ + S T P + +KD +++++P SK+ I + D
Sbjct: 1874 KTSKNTSKITKLT-PTSKRSLTSSKD-NAAQKSSTKPKLLSKAEIIKVD 1920
>At5g67360.1 68418.m08494 cucumisin-like serine protease (ARA12)
Asp48; almost identical to cucumisin-like serine
protease (ARA12) GI:3176874 from [Arabidopsis thaliana]
Length = 757
Score = 29.1 bits (62), Expect = 8.3
Identities = 19/71 (26%), Positives = 31/71 (43%)
Query: 369 DKNSNWFVSDSDSKSITEDETKQSNSVIQRFSRRLKLDNVLNKSTKQTLPKIEVVERPPV 428
D +SNW+ S S S + + + I FS RL + + T+ + + R +
Sbjct: 46 DLHSNWYDSSLRSISDSAELLYTYENAIHGFSTRLTQEEADSLMTQPGVISVLPEHRYEL 105
Query: 429 HTQPVPYFSGI 439
HT P F G+
Sbjct: 106 HTTRTPLFLGL 116
>At5g02040.2 68418.m00125 prenylated rab acceptor (PRA1) family
protein contains Pfam PF03208: PRA1 family protein
Length = 209
Score = 29.1 bits (62), Expect = 8.3
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 328 NDTNDDKFN-FDESDYFNPPTPPERFDSLFPEEKPTERVQNRDK 370
N T DD F+ E D+ +PP PP F S F K + +R K
Sbjct: 5 NVTVDDLFDALREVDWSSPPRPPSEFFSRFTVPKSVPKWDSRLK 48
>At5g02040.1 68418.m00124 prenylated rab acceptor (PRA1) family
protein contains Pfam PF03208: PRA1 family protein
Length = 209
Score = 29.1 bits (62), Expect = 8.3
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 328 NDTNDDKFN-FDESDYFNPPTPPERFDSLFPEEKPTERVQNRDK 370
N T DD F+ E D+ +PP PP F S F K + +R K
Sbjct: 5 NVTVDDLFDALREVDWSSPPRPPSEFFSRFTVPKSVPKWDSRLK 48
>At1g21630.1 68414.m02708 calcium-binding EF hand family protein
contains INTERPRO:IPR002048 calcium-binding EF-hand
domain; ESTs gb|T44428 and gb|AA395440 come from this
gene
Length = 1218
Score = 29.1 bits (62), Expect = 8.3
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 328 NDTNDDKFNFDESDYFNPPTPPE----RFDSLFPEEKPTERVQNRDKNSNWFVSDSDSKS 383
N N+D F+ +D + P+ RFDS + + Q+ D +SN S++ S
Sbjct: 1107 NSNNNDAFSLSRTDSMRSTSEPDPFASRFDSFNYQRYDSFNAQSYDSSSNNNASETPKAS 1166
Query: 384 IT 385
+T
Sbjct: 1167 LT 1168
>At1g20790.1 68414.m02603 F-box family protein contains Pfam:PF00646
F-box domain
Length = 435
Score = 29.1 bits (62), Expect = 8.3
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 5 PIPKPRSAFLPQNDPLKQPVPLPRTKVPPNDRGSASEILRSISSV 49
P+P P + +P P+ P+P+P TK + + SE++ S+ ++
Sbjct: 382 PMPMPIAMAMPM--PMPMPMPMPMTKT-ETETVTRSEVISSVMAI 423
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.312 0.128 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,100,053
Number of Sequences: 28952
Number of extensions: 642019
Number of successful extensions: 1957
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1944
Number of HSP's gapped (non-prelim): 38
length of query: 567
length of database: 12,070,560
effective HSP length: 85
effective length of query: 482
effective length of database: 9,609,640
effective search space: 4631846480
effective search space used: 4631846480
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 62 (29.1 bits)
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