Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002140-TA|BGIBMGA002140-PA|IPR000873|AMP-dependent
synthetase and ligase
(1071 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0214 - 23674270-23676858,23677574-23680843,23680941-236811... 108 2e-23
01_06_0002 - 25492807-25494675 82 2e-15
05_07_0241 + 28609700-28611649 73 9e-13
03_01_0369 - 2863159-2863491,2864149-2864214,2865045-2865140,286... 41 0.006
08_01_0214 - 1710317-1710443,1710839-1711047,1711161-1711420,171... 37 0.075
08_02_0851 - 21866088-21866210,21866311-21866413,21866531-218667... 35 0.30
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 34 0.70
02_05_0403 - 28696043-28696153,28696245-28696347,28696443-286965... 34 0.70
10_08_1051 - 22562840-22562971,22563474-22563576,22563701-225637... 33 1.6
07_01_1136 + 10668637-10669665,10670259-10670282 33 1.6
08_01_0900 + 8867895-8868938,8869887-8870085,8871500-8871713,887... 32 2.1
07_03_1438 - 26552160-26552291,26552430-26552535,26552772-26553283 31 3.7
04_03_0824 + 20086639-20087263,20087282-20087463,20087569-200877... 31 3.7
02_01_0590 + 4376785-4377009,4378153-4378407,4378514-4378641,437... 31 6.5
>04_04_0214 -
23674270-23676858,23677574-23680843,23680941-23681119,
23681200-23681559,23681645-23682086,23682199-23682332,
23682479-23682680
Length = 2391
Score = 108 bits (260), Expect = 2e-23
Identities = 117/461 (25%), Positives = 189/461 (40%), Gaps = 51/461 (11%)
Query: 466 TSDHVIFTLLNAKGAVSKVLTCAELHKKAERIGNLLLEKGR--VNTGDHVALIFPPGLDL 523
T +VI+T +N +G + T ELH A I LL + + GD V LI PGL+
Sbjct: 483 TEKNVIYTWINEEGKLMNRRTYQELHGNASYIAQKLLTSTKPVIKPGDRVLLIHLPGLEF 542
Query: 524 ICAFYGCLYVGAVPVTIRPPHP-QNLHTTLPTVRMIVDVSKATLVLSNQSVIKLLRSKEA 582
I AF+GC+ G +PV + PP P Q+ L V I + A +LS S +R+
Sbjct: 543 IDAFFGCIRAGVIPVPVLPPDPMQSGGQALLKVENISKMCNAVAILSTSSYHAAVRAGYI 602
Query: 583 SNVLD--------SKAWP--MTLDTDDMPK---------KKLPIMYRAPTAEMLAYLDFS 623
N++ S WP + TD K +++ P L +L F+
Sbjct: 603 KNIVTLAKRVQKCSAQWPDIPWIHTDSWIKNYRRSSDSFNSDTVLFTKPQPSDLCFLQFT 662
Query: 624 VSTTGMLAGIKMSHAAVTSLCRSMKIACELYPSRHIALCLDPYCGLGFALWCLSSIYSGH 683
+TG G+ ++H + ++MK + L Y +G +++ SG
Sbjct: 663 SGSTGDAKGVMITHEGLIHNVKTMKKRYRSTSKTVLVSWLPQYHDMGLIGGLFTALVSGG 722
Query: 684 HSILIPPSEVEVNPALWLSAVSQYKVRDTFCSYGVMELCTKGLGSSVNQLKSKGINLACV 743
S+L P NP LWL ++ Y + EL + L + K+K +L+ +
Sbjct: 723 TSVLFSPMIFIRNPLLWLQTINDYHGTHSAGPNFAFELVIRRLEAE----KNKVYDLSSM 778
Query: 744 RTCVVVAEERPRINLTNSFSKLFSALGLSPRAVSTSFGCRVN--IAICLQGASSPEPSTV 801
+++A E R F +L GLS ++ +G N C G P V
Sbjct: 779 -VFLMIAAEPVRQKTVRRFIELTQPFGLSEGVLAPGYGLAENCVYVTCAFGECKP----V 833
Query: 802 YVDLRALRNDRVSLVERGSPHSLCLMESGKLLPGVKVITANPETKGQCGDSHLGEIWVQS 861
++D + VE+ +L ++++ + T+ Q D GEIW+ S
Sbjct: 834 FIDWQG--RVCCGYVEQDDTDTL-----------IRIVDPDSLTEHQ-EDGVEGEIWISS 879
Query: 862 PHNASGYFTIYGDESDYADHFSAQLVTGNTGEVYARTGYLG 902
P + GY +G+ F QL + + + RTG LG
Sbjct: 880 PSSGVGY---WGNSEMSQRTFFNQL-KNHPNKKFTRTGDLG 916
Score = 37.9 bits (84), Expect = 0.043
Identities = 53/220 (24%), Positives = 89/220 (40%), Gaps = 26/220 (11%)
Query: 187 CGQVMPSCVIVVVKMEGPAYLCKTDE---VGEICVLSGATGSGYWGLPGLTNTVFRVRPL 243
CG V ++++ P L + E GEI + S ++G GYWG N+ R
Sbjct: 843 CGYVEQDDTDTLIRIVDPDSLTEHQEDGVEGEIWISSPSSGVGYWG-----NSEMSQRTF 897
Query: 244 DSDGEPIGEEHYVRSXXXXXXXXXXXXXXXXSRDGLMTVTGRKHNMDDIIATVLAVEPMK 303
+ + + + R+ +D L+ V GR D+ TV + +
Sbjct: 898 FNQLKNHPNKKFTRTGDLGRTIDGNLFITGRIKD-LIIVAGRNIYSADVEKTVESSSEV- 955
Query: 304 FIYRGRIAVFSV--RVLRDERICI-----------VAEQRPDCGEEESFQWMSRVLQAVD 350
+ G AV + VL + I I +AE R G+ S + ++ + V
Sbjct: 956 -LRPGCCAVVGIPEEVLAQKGISIPDSSDQVGLVVIAEVRE--GKAVSKEVVNNIKARVV 1012
Query: 351 SIHQVGIYCLALVQPNFLPKTPLGGIHLSECKRRFLEGTL 390
H V + + L++P + KT G I EC R+F++ TL
Sbjct: 1013 EEHGVAVASVKLIKPRTICKTTSGKIRRFECMRQFVDNTL 1052
>01_06_0002 - 25492807-25494675
Length = 622
Score = 82.2 bits (194), Expect = 2e-15
Identities = 105/439 (23%), Positives = 176/439 (40%), Gaps = 39/439 (8%)
Query: 483 KVLTCAELHKKAERIGNLLLEKGRVNTGDHVALIFPPGLDLICAFYGCLYVGAVPVTIRP 542
+ LT +EL +R+ LLE R GD V ++ PG+ L+ + C G V V + P
Sbjct: 52 ETLTYSELDSAVQRMAAGLLEVLR--RGDTVLVLASPGIRLVKLMFACQRAGLVAVPVIP 109
Query: 543 PHPQNLHTTL--PTVRMI---VDVSKATLVLSNQSVIKLLRSKEASNVLDSKAWPMTLDT 597
P P + T P R + V ++ +++ + + ++ + + L S W
Sbjct: 110 PDPSVIGTPAEGPAHRHLLRAVSQARPRAAVADAGYVGAV-TRSSISALMSLNWVSVDRL 168
Query: 598 DDMPKKKLPI------MYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKIAC 651
+ P + +Y + ++ TG + ++ A R+ + A
Sbjct: 169 ERWPAVASTVAATGDGVYEGCGPRETYLVQYTSGATGDPKPVVVTAGAAAHNARAARKAY 228
Query: 652 ELYPSRHIALCLDPY--CGLGFALWCLSSIYSGHHSILIPPSEVEVNPALWLSAVSQYKV 709
+L P + L Y CGL F L ++ SG +L S P LWL +S++K
Sbjct: 229 DLRPGSVVVSWLPQYHDCGLMFLLL---TVVSGATCVLTSASAFVRRPRLWLELISEFKA 285
Query: 710 RDTFCSYGVMELCTKGLGSSVNQLKSKGINLACVRTCVVVAEERPRINLTNSFSKLFSAL 769
T + L + G S + ++ + L +R ++V E + + + F + F
Sbjct: 286 TCTPVPSFALPLVLRR-GRSEHG--TRPLQLQTLRNLILVNEPIYK-SPVDEFLEEFGPA 341
Query: 770 GLSPRAVSTSFGCRVNIAICLQGASSPEPSTVYVDLRALRNDRVSLVERGSPHSLCLMES 829
GL ++S S+G N E + L + + L P L E+
Sbjct: 342 GLRASSISPSYGLAENCTFVSTAWRGTEVT--------LPSYKKLLPSARLPQPSLLTEA 393
Query: 830 GKLLPGVKVITANPETKGQCGDSHLGEIWVQSPHNASGYFTIYGDESDYADHFSAQLVTG 889
P V+++ + ET D GEIW+ SP N SGY GD + F A+L G
Sbjct: 394 ----PDVEIVVVDAETGKLVEDGVEGEIWLSSPSNGSGYL---GDSPASREVFGARL-QG 445
Query: 890 NTGEVYARTGYLGFLRRTE 908
G + RT LG + TE
Sbjct: 446 RAGPCFVRTSDLGVVHGTE 464
Score = 42.3 bits (95), Expect = 0.002
Identities = 88/392 (22%), Positives = 145/392 (36%), Gaps = 28/392 (7%)
Query: 4 HCRMLSVACNYTEGEHMVCVLDFKRETGLWHAVLASVLNGMHVIFIPYALMKVSPASWMH 63
+ R A + G +V L + GL +L +V++G + + P W+
Sbjct: 220 NARAARKAYDLRPGSVVVSWLPQYHDCGLMFLLL-TVVSGATCVLTSASAFVRRPRLWLE 278
Query: 64 MITKHRASIAIVKSRDLHWGLLATR-DH--KEISLSSLRMLLVADGANPWSLSSCDQFLS 120
+I++ +A+ V S L L R +H + + L +LR L++ + P S D+FL
Sbjct: 279 LISEFKATCTPVPSFALPLVLRRGRSEHGTRPLQLQTLRNLILVN--EPIYKSPVDEFLE 336
Query: 121 VFQSKGVRGDAICPCACSSESMTVCIXXXXXXXXXXXXXVLSMSGLSYGVVRVDAENSLT 180
F G+R +I P +E+ T ++ SY + A
Sbjct: 337 EFGPAGLRASSISPSYGLAENCTFVSTAWRGT---------EVTLPSYKKLLPSARLPQP 387
Query: 181 SLTLQDCGQVMPSCVIVVVKMEGPAYLCKTDEVGEICVLSGATGSGYWGLPGLTNTVFRV 240
SL + P IVVV E L + GEI + S + GSGY G + VF
Sbjct: 388 SLLTE-----APDVEIVVVDAE-TGKLVEDGVEGEIWLSSPSNGSGYLGDSPASREVFGA 441
Query: 241 RPLDSDGEPIGEEHYVRSXXXXXXXXXXXXXXXXSR--DGLMTVTGRKHNMDDIIATVLA 298
R L P +VR+ R D ++ ++ I T
Sbjct: 442 R-LQGRAGPC----FVRTSDLGVVHGTERYLYVLGRTTDAIVVADSQRRVPAHYIETAAF 496
Query: 299 VEPMKFIYRGRIAVFSVRVLRDERICIVAEQRPDCGEEESFQWMSRVLQAVDSIHQVGIY 358
+ G IA F+ + + +VAE + G + + QAV V +
Sbjct: 497 ESSPGRLRGGCIASFTTLPVSPSPVVVVAELQNGGGGGDMAGICHGIRQAVWREVGVTVA 556
Query: 359 CLALVQPNFLPKTPLGGIHLSECKRRFLEGTL 390
+ L + +PKT G + + + L G L
Sbjct: 557 RVVLAESGGVPKTTSGKLQRGAARAKLLAGKL 588
>05_07_0241 + 28609700-28611649
Length = 649
Score = 73.3 bits (172), Expect = 9e-13
Identities = 104/439 (23%), Positives = 172/439 (39%), Gaps = 48/439 (10%)
Query: 485 LTCAELHKKAERIGNLLLEKGRVNTGDHVALIFPPGLDLICAFYGCLYVGAVPVTIRPPH 544
LT ++L ER+ + LL G + D V ++ PGL L+ + C V I PP
Sbjct: 50 LTYSQLDAAVERMSSGLL--GALRRADTVLVLASPGLRLVKLLFACQRAVLTAVPIIPPD 107
Query: 545 PQN------LHTTLPTV-------RMIVDVSKATLVLSNQSVIKLLRSKEA-SNVLDSKA 590
P H+ L + D + + +V+ + + + +L S
Sbjct: 108 PSRPGAGGAAHSHLLRAVSQTRPRAAVADARYIDAIKKSNAVVDVAGEPDRLAAMLRSLR 167
Query: 591 WPMTLDTDDMPKK----KLPIMYRAPTAEMLAYL-DFSVSTTGMLAGIKMSHAAVTSLCR 645
W L D++ + P+ AYL ++ TG + ++ A R
Sbjct: 168 W---LSVDELEQGGANGAAPVTPFVGGEPEDAYLIQYTSGATGAQKPVVITAGAAAHNAR 224
Query: 646 SMKIACELYPSRHIALCLDPY--CGLGFALWCLSSIYSGHHSILIPPSEVEVNPALWLSA 703
+ + A EL+P + L Y CGL ++ L ++ +G +L P P LWL
Sbjct: 225 AARRAYELHPGSVVVSWLPQYHDCGL---MFLLLTVVAGATCVLASPDAFVRRPRLWLEL 281
Query: 704 VSQYKVRDTFCSYGVMELCTKGLGSSVNQLKSKGINLACVRTCVVVAEERPRINLTNSFS 763
V++++ T + L + G S + + + + L + +++ E + + + F
Sbjct: 282 VTEFRATCTPVPSFALPLVLR-RGRSPDGRRRRPLELGSLENLILINEPIYK-SCVDEFV 339
Query: 764 KLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSTVYVDLRALRNDRVSLVERGSPHS 823
F GL P ++S S+G N S+ S VDL + + + P +
Sbjct: 340 AEFRGDGLLPASISPSYGLAENCTF----VSTAWRSRRCVDLPSYK--------KLLPSA 387
Query: 824 LCLMESGKLLPGVKVITANPETKGQCGDSHLGEIWVQSPHNASGYFTIYGDESDYADHFS 883
P +++I + ET D GEIWV SP NASGY G S + F
Sbjct: 388 RLSFHMADEEPEIEIIMVDEETGEPVEDGVEGEIWVSSPSNASGYL---GHPSATREVFC 444
Query: 884 AQLVTGNTGEVYARTGYLG 902
A L G Y RTG G
Sbjct: 445 ATL--PGKGSCYVRTGDRG 461
>03_01_0369 -
2863159-2863491,2864149-2864214,2865045-2865140,
2865530-2865632,2865771-2865838,2866570-2866712,
2867050-2867242,2867602-2867640,2867742-2867807,
2868617-2869651
Length = 713
Score = 40.7 bits (91), Expect = 0.006
Identities = 88/403 (21%), Positives = 157/403 (38%), Gaps = 24/403 (5%)
Query: 480 AVSKVLTCAELHKKAERIGNLLLEKGRVNTGDHVALIFPPGLDLICAFYGCLYVGAVPVT 539
A + LT AEL L + V GD V L+ P + F+ +GAV T
Sbjct: 56 AGGRALTFAELRSAVLSTAVALSSRAGVRPGDAVLLLAPNCVLYPVCFFAVTALGAVGTT 115
Query: 540 IRPPH-PQNLHTTLPTVR--MIVDVSKATLVLSNQSVIKLLRSKEASNVLDS--KAWPMT 594
+ P + P+ + + R +++ +S ++ + +L +A+ S +T
Sbjct: 116 VNPDYTPREIAKQVSDARAKLVITISALVPKIAGLRLPVILLDDDANAAAASLPPDATVT 175
Query: 595 LDTDDMPKKKLPIMYRAPTAEM-LAYLDFSVSTTGMLAGIKMSHAAVTSLCRSM-KIACE 652
L T+ + K R P + A L +S TTG G+ ++H + R + E
Sbjct: 176 LYTNLVAGVKEADYRRPPIKQSDTAALLYSSGTTGDSKGVILTHRNFIAAARMVTSDQDE 235
Query: 653 LYPSRHIALCLDPYCGL-GFALWCLSSIYSGHHSILIPPSEVEVNPALWLSAVSQYKVRD 711
++ LC P + G ++ + ++ G + +I S ++N + AV +++V
Sbjct: 236 RREGPNVFLCFLPMFHIFGLSVITYAQLHRG--NAIIAMSRFDINSL--MEAVQRHRVTH 291
Query: 712 TFCSYGV-MELCTKGLGS--SVNQLKSKGINLACVRTCV--VVAEERPRINLTNSFSKLF 766
FC V + L G ++ LK G A + V VVA++ P + F
Sbjct: 292 LFCVPPVIIALAKHGKAGKYDLSSLKFIGSGAAPLGKDVMEVVAKKFPDSEIVQWALNWF 351
Query: 767 SALGLSPRAVSTSFGCRVNIAICLQGASSPEPSTVYVDLRALRNDRVSLVERGSPHSLCL 826
+ +S FG I L + + Y + E+G
Sbjct: 352 ----IRKLVLSDLFGSIWYIPTVLD-SRGVQAFLGYGMTETCGIISLEYPEKGQARE--F 404
Query: 827 MESGKLLPGVKVITANPETKGQCGDSHLGEIWVQSPHNASGYF 869
+G L+ GV+ + +T + +GEI V+ P+ GYF
Sbjct: 405 GSTGTLVSGVEAKIVDIKTLKHLPPNQVGEICVRGPNVMQGYF 447
>08_01_0214 -
1710317-1710443,1710839-1711047,1711161-1711420,
1711442-1711534,1711745-1711872,1711958-1712151,
1712288-1712385,1712548-1712658,1712782-1712950,
1713109-1713181,1713311-1713507
Length = 552
Score = 37.1 bits (82), Expect = 0.075
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 617 LAYLDFSVSTTGMLAGIKMSHAAVTSLCRSM-KIACELYPSRHIALCLDPYCGLGFALWC 675
+A + F+ TTG G+ +SH ++ + +S+ KIA Y I L P C +G C
Sbjct: 176 VALICFTSGTTGRPKGVAISHTSL--IIQSLAKIAIVGYGEDDIYLHTAPLCHIGGISSC 233
Query: 676 LSSIYSGHHSILIPPSEVE 694
L+ + +G +LIP +V+
Sbjct: 234 LAILMAGGCHVLIPKFDVK 252
>08_02_0851 -
21866088-21866210,21866311-21866413,21866531-21866744,
21866877-21867075,21867171-21868151
Length = 539
Score = 35.1 bits (77), Expect = 0.30
Identities = 40/171 (23%), Positives = 71/171 (41%), Gaps = 11/171 (6%)
Query: 479 GAVSKVLTCAELHKKAERIGNLLLEKGRVNTGDHVALIFPPGLDLICAFYGCLYVGAVPV 538
GA + L+ ++ + R+ L G V G V L+ P ++ AF +GAV
Sbjct: 45 GATGETLSFGDVDALSRRVAAGLSSIG-VCHGSTVMLLLPNSVEFAVAFLASSRLGAVTT 103
Query: 539 TIRPPH-PQNLHTTLPTVRMIVDVSKATLV--LSNQSVIKLLRSKEASNVLDSKAWPMTL 595
T P H P + + V V++ V +S + + ++ + + S A
Sbjct: 104 TANPLHTPPEIAKQVAASGATVVVTEPAFVAKVSGLAGVTVVATGGGAERCASFAGLAAA 163
Query: 596 DTDDMPKKKLPIMYRAPTAEMLAYLDFSVSTTGMLAGIKMSH-AAVTSLCR 645
D +P+ + + A L +S TTG+ G+ +SH VTS+ +
Sbjct: 164 DGSALPEVAIDV------ANDAVALPYSSGTTGLPKGVMLSHRGLVTSVAQ 208
>03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 33.9 bits (74), Expect = 0.70
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 383 RRFLEG---TLHPSNVLMCPHTCVTNLPKPREIHSDVGPASVIV 423
RRFL+G ++ PSN L+C VT PR IH D+ A++++
Sbjct: 1505 RRFLQGQILSVRPSNDLICCIVVVTYEGHPRIIHRDIKAANILL 1548
>02_05_0403 -
28696043-28696153,28696245-28696347,28696443-28696510,
28696582-28696727,28698038-28699124
Length = 504
Score = 33.9 bits (74), Expect = 0.70
Identities = 44/179 (24%), Positives = 70/179 (39%), Gaps = 20/179 (11%)
Query: 480 AVSKVLTCAELHKKAERIGNLLLEKGRVNTGDHVALIFPPGLDLICAFYGCLYVGAVPVT 539
A + T AE R L G V GD V ++ ++ AF+ ++GAV
Sbjct: 64 ATGRTYTFAETRLLCRRAAAALHRLG-VGHGDRVMVLLQNCVEFAVAFFAASFLGAVTTA 122
Query: 540 IRP-PHPQNLHTTLPT--VRMIVDVSKATLVLSNQSVIKLLRSKEASNVLDSKAWPMTLD 596
P PQ +H V++I+ S L + +A V D +T+D
Sbjct: 123 ANPFCTPQEIHKQFKASGVKLILTQSVYVDKLRQHEAFPRI---DACTVGDDTLTVITID 179
Query: 597 TDD-MPKKKLP------------IMYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTS 642
D+ P+ LP + A + + L FS TTG+ G+ ++H +V S
Sbjct: 180 DDEATPEGCLPFWDLIADADEGSVPEVAISPDDPVALPFSSGTTGLPKGVVLTHRSVVS 238
>10_08_1051 -
22562840-22562971,22563474-22563576,22563701-22563768,
22563896-22564053,22564706-22564895,22565162-22566205
Length = 564
Score = 32.7 bits (71), Expect = 1.6
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 947 DTHDAVFVVGALDETIMLRGMRYHPIDIENSVMRCHKKIAECAV 990
D+ +F+VG L +TI +G + P D+E ++R H +I + AV
Sbjct: 443 DSDGYLFIVGRLKDTIKYKGFQIAPADLEAVLIR-HPEIIDVAV 485
>07_01_1136 + 10668637-10669665,10670259-10670282
Length = 350
Score = 32.7 bits (71), Expect = 1.6
Identities = 43/216 (19%), Positives = 83/216 (38%), Gaps = 8/216 (3%)
Query: 510 GDHVALIFPPGLDLICAFYGCLYVGAVPVTIRPPHPQNLHTTLPTVRMIVDVSKATLVLS 569
GD ++ P GLD+ ++ L +GAV + P +P T V +V +S A++ +
Sbjct: 98 GDVAFVLAPAGLDVPVLYFALLSIGAV---VSPANPA---LTPAEVSRLVSLSGASVAFA 151
Query: 570 -NQSVIKLLRSKEASNVLDSKAWPMTLDTDDMPKKKLPIMYRAPTAEMLAYLDFSVSTTG 628
+ + KL +LDS + L + + P+ A + +S TTG
Sbjct: 152 VSSTATKLPAGLTTVVLLDSPHFRSLLMDCGQAQGQEPLPVVVVRQSETAAIQYSSGTTG 211
Query: 629 MLAGIKMSHAAVTSLCRSMKIACELYPSRHIALCLDPYCGLGFALWCLSSIYSGHHSILI 688
+ + H + ++ L + +GF L+ L + G ++++
Sbjct: 212 RVKAAALPHRSFIAMVAGFHALRAKAREVRTLLGAPMFHSMGF-LFVLQGVALGATTVVV 270
Query: 689 PPSEVEVNPALWLSAVSQYKVRDTFCSYGVMELCTK 724
+ + A ++ V D S V+ TK
Sbjct: 271 TDAVARAGIRGLVEAAERWAVMDMTASPPVVLGMTK 306
>08_01_0900 +
8867895-8868938,8869887-8870085,8871500-8871713,
8871854-8871959,8872077-8872199
Length = 561
Score = 32.3 bits (70), Expect = 2.1
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 947 DTHDAVFVVGALDETIMLRGMRYHPIDIENSVMRCHKKIAECAV 990
D D +F+V L E I RG + P ++E +++ H IA+ AV
Sbjct: 442 DDDDEIFIVDRLKEIIKYRGFQVAPAELE-ALLITHPSIADAAV 484
>07_03_1438 - 26552160-26552291,26552430-26552535,26552772-26553283
Length = 249
Score = 31.5 bits (68), Expect = 3.7
Identities = 18/75 (24%), Positives = 32/75 (42%)
Query: 830 GKLLPGVKVITANPETKGQCGDSHLGEIWVQSPHNASGYFTIYGDESDYADHFSAQLVTG 889
G+L+P V+ +P++ GE+WV+ P GY + + +
Sbjct: 52 GRLMPDVEAKIVDPDSGELLPPRRTGELWVRGPSTMRGYLNNEEATALALVAAAGSVSVS 111
Query: 890 NTGEVYARTGYLGFL 904
GE + RTG L ++
Sbjct: 112 GGGERWLRTGDLCYV 126
>04_03_0824 +
20086639-20087263,20087282-20087463,20087569-20087724,
20087867-20087989,20088079-20088247,20088384-20088466,
20088641-20088742,20089246-20089359,20089735-20089811,
20089884-20089962,20090060-20090128,20090235-20090410,
20090460-20090561,20090678-20090768,20090878-20090976,
20091141-20091326
Length = 810
Score = 31.5 bits (68), Expect = 3.7
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 476 NAKGAVSKVLTCAELHKKAERIGNLLLEKGRVNTGDHVALIFPPGLDLICAFYGCLYVGA 535
N G +K LT +EL K ++ N L G V GD V + P ++L A C +GA
Sbjct: 302 NEPGQDAK-LTYSELLNKVCQLANYLKSVG-VGKGDAVVIYLPMLMELPIAMLACARIGA 359
Query: 536 V 536
V
Sbjct: 360 V 360
>02_01_0590 +
4376785-4377009,4378153-4378407,4378514-4378641,
4378738-4378779,4378875-4378956,4379035-4379103,
4379180-4379350,4379430-4379495,4379777-4379845,
4379928-4380056,4380845-4380881,4380906-4380997,
4381541-4381602,4381855-4381918
Length = 496
Score = 30.7 bits (66), Expect = 6.5
Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 7/93 (7%)
Query: 4 HCRMLSVACNYTEGEHMVCVLDFKRETGLWHAVLASVLNGMHVIFIPYALMKVSPASWMH 63
H +L C++TEGE + ++ + +H + +S G FI + L +
Sbjct: 90 HDNLLGAYCSFTEGETLWIIMPYMAGGSCFHLMKSSYPKGFDEKFIAFVLRETLEG---- 145
Query: 64 MITKHRASIAIVKSRDLHWGLLATRDHKEISLS 96
+ HR ++ RD+ G + HK + L+
Sbjct: 146 LAYLHRYALV---HRDVKAGNILLDQHKGVKLA 175
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.322 0.135 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,724,073
Number of Sequences: 37544
Number of extensions: 1204081
Number of successful extensions: 2410
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2384
Number of HSP's gapped (non-prelim): 32
length of query: 1071
length of database: 14,793,348
effective HSP length: 90
effective length of query: 981
effective length of database: 11,414,388
effective search space: 11197514628
effective search space used: 11197514628
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 65 (30.3 bits)
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