GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002139-TA|BGIBMGA002139-PA|undefined
         (239 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF246991-1|AAF64300.1| 1640|Drosophila melanogaster unknown prot...   165   4e-41
AE014296-64|AAF47364.2| 1773|Drosophila melanogaster CG7020-PA p...   165   4e-41

>AF246991-1|AAF64300.1| 1640|Drosophila melanogaster unknown
           protein.
          Length = 1640

 Score =  165 bits (402), Expect = 4e-41
 Identities = 89/143 (62%), Positives = 99/143 (69%), Gaps = 9/143 (6%)

Query: 7   PDVTNATAASRRGGALVADRVQCY---AQAEDTGT-GTGRWKVSAKIQQLLNTLKRPKRR 62
           PD+T    A R      ADRV  Y   +Q E   T   G+WKVSAKIQQLLNTLKRPKRR
Sbjct: 212 PDITQFNNAHR-----AADRVTRYVNVSQNELNETDANGKWKVSAKIQQLLNTLKRPKRR 266

Query: 63  PLPEFYEDDDIELELXXXXXXXXXXXXEGGTMTPAVGEQLVVPAGLPRNLEAALQRYGTA 122
           PLPEFYED+DIELE+            EG TMTP  GEQL +PAGLPR LE ALQRYGT 
Sbjct: 267 PLPEFYEDNDIELEIAANTKDPNAPKPEGSTMTPVQGEQLSIPAGLPRTLECALQRYGTN 326

Query: 123 SFKANMATVLDPNGKLSNSLTYG 145
           SFK+ MATVLDPNGK++ +LTYG
Sbjct: 327 SFKSPMATVLDPNGKVTTTLTYG 349



 Score = 52.0 bits (119), Expect = 7e-07
 Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 2/72 (2%)

Query: 139 SNSLTYGLPK-TSSGDVVSFRGWPSLHWVSTEKLXXXXXXXXXXXXXADE-CPAHIEHTS 196
           S +   GLPK T++G++   +GWP L W  TE L             AD+   A+IE+T+
Sbjct: 440 SEACLKGLPKSTTTGEIAKLKGWPRLQWFVTEHLPKPPKEFNVGNLRADDSAAAYIEYTT 499

Query: 197 AADGSAMGVIVT 208
             +GS MGV VT
Sbjct: 500 DKEGSVMGVTVT 511


>AE014296-64|AAF47364.2| 1773|Drosophila melanogaster CG7020-PA
           protein.
          Length = 1773

 Score =  165 bits (402), Expect = 4e-41
 Identities = 89/143 (62%), Positives = 99/143 (69%), Gaps = 9/143 (6%)

Query: 7   PDVTNATAASRRGGALVADRVQCY---AQAEDTGT-GTGRWKVSAKIQQLLNTLKRPKRR 62
           PD+T    A R      ADRV  Y   +Q E   T   G+WKVSAKIQQLLNTLKRPKRR
Sbjct: 345 PDITQFNNAHR-----AADRVTRYVNVSQNELNETDANGKWKVSAKIQQLLNTLKRPKRR 399

Query: 63  PLPEFYEDDDIELELXXXXXXXXXXXXEGGTMTPAVGEQLVVPAGLPRNLEAALQRYGTA 122
           PLPEFYED+DIELE+            EG TMTP  GEQL +PAGLPR LE ALQRYGT 
Sbjct: 400 PLPEFYEDNDIELEIAANTKDPNAPKPEGSTMTPVQGEQLSIPAGLPRTLECALQRYGTN 459

Query: 123 SFKANMATVLDPNGKLSNSLTYG 145
           SFK+ MATVLDPNGK++ +LTYG
Sbjct: 460 SFKSPMATVLDPNGKVTTTLTYG 482



 Score = 52.0 bits (119), Expect = 7e-07
 Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 2/72 (2%)

Query: 139 SNSLTYGLPK-TSSGDVVSFRGWPSLHWVSTEKLXXXXXXXXXXXXXADE-CPAHIEHTS 196
           S +   GLPK T++G++   +GWP L W  TE L             AD+   A+IE+T+
Sbjct: 573 SEACLKGLPKSTTTGEIAKLKGWPRLQWFVTEHLPKPPKEFNVGNLRADDSAAAYIEYTT 632

Query: 197 AADGSAMGVIVT 208
             +GS MGV VT
Sbjct: 633 DKEGSVMGVTVT 644


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.315    0.131    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,400,278
Number of Sequences: 52641
Number of extensions: 396861
Number of successful extensions: 1054
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1048
Number of HSP's gapped (non-prelim): 4
length of query: 239
length of database: 24,830,863
effective HSP length: 83
effective length of query: 156
effective length of database: 20,461,660
effective search space: 3192018960
effective search space used: 3192018960
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)