GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002136-TA|BGIBMGA002136-PA|IPR000884|Thrombospondin,
type I, IPR001791|Laminin G, IPR008085|Thrombospondin, subtype 1,
IPR008985|Concanavalin A-like lectin/glucanase
         (1085 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    30   0.38 
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         27   2.7  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         27   2.7  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    26   6.2  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 29.9 bits (64), Expect = 0.38
 Identities = 13/37 (35%), Positives = 22/37 (59%)

Query: 534  EKANMEEGYINLDNDQYIRIPCFLNQEEWRIGLTLKP 570
            EKA     Y+ +  D+++R+P + NQ+E  +  TL P
Sbjct: 1092 EKARDPGRYLMIPGDKFMRLPSYTNQDEKDLIRTLAP 1128


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 27.1 bits (57), Expect = 2.7
 Identities = 13/38 (34%), Positives = 17/38 (44%)

Query: 983  RCEPNYISSPGHGSFSSPRTKFTSTSSLEMTSPRVLCS 1020
            RC P    SP H   SS     T+T ++   SP   C+
Sbjct: 6    RCSPQSAPSPPHHHHSSQSPTSTTTVTMATASPVPACT 43


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 27.1 bits (57), Expect = 2.7
 Identities = 13/38 (34%), Positives = 17/38 (44%)

Query: 983  RCEPNYISSPGHGSFSSPRTKFTSTSSLEMTSPRVLCS 1020
            RC P    SP H   SS     T+T ++   SP   C+
Sbjct: 6    RCSPQSAPSPPHHHHSSQSPTSTTTVTMATASPVPACT 43


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 2/54 (3%)

Query: 718 ASITVDNILLDIHQLSIERNKNGIVQMSSRTASVSGSY--HETSLGRSNRLNLT 769
           A +T  +  +++H+L  ++ +NG    +    S +G +  H+  +  +N LN+T
Sbjct: 683 AGLTTRSPPIELHELQQQQQQNGGPTATIMMISTAGPHHPHDLLIEENNMLNMT 736


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.135    0.423 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,082,116
Number of Sequences: 2123
Number of extensions: 44269
Number of successful extensions: 102
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 99
Number of HSP's gapped (non-prelim): 4
length of query: 1085
length of database: 516,269
effective HSP length: 71
effective length of query: 1014
effective length of database: 365,536
effective search space: 370653504
effective search space used: 370653504
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)