GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002136-TA|BGIBMGA002136-PA|IPR000884|Thrombospondin,
type I, IPR001791|Laminin G, IPR008085|Thrombospondin, subtype 1,
IPR008985|Concanavalin A-like lectin/glucanase
         (1085 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    29   0.20 
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    25   4.4  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 29.1 bits (62), Expect = 0.20
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 4/70 (5%)

Query: 82  NPPPFEDGIMCSGEAEQIRS---CYLTNCTVNDYKELIKGDAIRNDAFRHLETVPSLMER 138
           NP P   G      + + +S   C L+N      +ELIK   + ND  ++LE      +R
Sbjct: 57  NPGPGSKGPRDFPRSHRFKSLPRCQLSNKRDRS-RELIKAAILANDFMKNLELTQIRRDR 115

Query: 139 CLQTECPFEA 148
            L   C F A
Sbjct: 116 GLHVSCSFSA 125


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 551 IRIPCFLNQEEWRIGLTLKPRSE-IGTILFLKNKMNWLHLSLQNMRLKLKLV 601
           +R P F+ + E R GLTL  RS+  G + +   ++  +     +  L+++LV
Sbjct: 114 MRAPSFICENETRQGLTLHYRSKRRGFVYYTMGQIREVARHFYHKELQIELV 165


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.135    0.423 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 300,344
Number of Sequences: 429
Number of extensions: 12233
Number of successful extensions: 22
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 21
Number of HSP's gapped (non-prelim): 2
length of query: 1085
length of database: 140,377
effective HSP length: 65
effective length of query: 1020
effective length of database: 112,492
effective search space: 114741840
effective search space used: 114741840
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)