Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002135-TA|BGIBMGA002135-PA|IPR011685|LETM1-like
(276 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC064943-1|AAH64943.1| 360|Homo sapiens LETM1 domain containing... 123 6e-28
AF315598-1|AAL26878.1| 304|Homo sapiens cervical cancer protoon... 123 6e-28
AF195651-1|AAK34885.1| 360|Homo sapiens cervical cancer 1 proto... 123 6e-28
AF329277-1|AAL56993.1| 203|Homo sapiens 507e08 protein. 98 3e-20
BC000395-1|AAH00395.2| 129|Homo sapiens LETMD1 protein protein. 65 3e-10
AY173945-1|AAO49715.1| 444|Homo sapiens leucine zipper-EF-hand ... 61 5e-09
BC021208-1|AAH21208.1| 739|Homo sapiens leucine zipper-EF-hand ... 59 1e-08
BC019274-1|AAH19274.1| 100|Homo sapiens LETMD1 protein protein. 59 1e-08
BC014500-1|AAH14500.1| 739|Homo sapiens leucine zipper-EF-hand ... 59 1e-08
AF061025-1|AAD13138.1| 739|Homo sapiens leucine zipper-EF-hand ... 59 1e-08
BC029541-1|AAH29541.2| 277|Homo sapiens LETM2 protein protein. 47 8e-05
AK058138-1|BAB71680.1| 396|Homo sapiens protein ( Homo sapiens ... 47 8e-05
CR456605-1|CAG30491.1| 707|Homo sapiens Em:U62317.9 protein. 31 4.4
BC021143-1|AAH21143.1| 707|Homo sapiens TMEM112B protein protein. 31 4.4
BC014652-1|AAH14652.1| 682|Homo sapiens transmembrane protein 1... 31 4.4
BC002942-1|AAH02942.2| 707|Homo sapiens TMEM112B protein protein. 31 4.4
>BC064943-1|AAH64943.1| 360|Homo sapiens LETM1 domain containing 1
protein.
Length = 360
Score = 123 bits (297), Expect = 6e-28
Identities = 69/272 (25%), Positives = 138/272 (50%), Gaps = 5/272 (1%)
Query: 1 MYRVFSVGIKDFLRDLKMYITLRIKVARDH-GFSKMSRQEIELYTKMPSDMLRIAPVLIL 59
+Y +F G++ D K ++ + + + F ++ +E+E + D+ + + I+
Sbjct: 85 LYTIFMKGLQMLWADAKKARRIKTNMWKHNIKFHQLPYREMEHLRQFRQDVTKCLFLGII 144
Query: 60 SAIPFGNYIIFPLAFLKPRTLLCSHFWSIQQKVEFSRQELTERLRHNKPVFRSLQAQVEI 119
S PF NY++F L +L PR LL HFW+ +Q+ +F R + + + L+ + +
Sbjct: 145 SIPPFANYLVFLLMYLFPRQLLIRHFWTPKQQTDFLDIYHAFRKQSHPEIISYLEKVIPL 204
Query: 120 IPDGDIKLKWKRVIASLGSGVHPSPKDVLACKDLFTKEPYQLSSLNYAHLGHLLKMHGLR 179
I D ++ + + + G HP+ D+LA ++ F+ P ++ L H+ L + L
Sbjct: 205 ISDAGLRWRLTDLCTKIQRGTHPAIHDILALRECFSNHPLGMNQLQALHVKALSRAMLLT 264
Query: 180 KSI---FRTSKLKYRAFLLLEMDKAIIREGGVNILNAETLRNACHMRGLNGSNLPNQDMR 236
+ +LK ++ ++DKA+ + G + L A+ +++AC++RGLN +++ R
Sbjct: 265 SYLPPPLLRHRLKTHTTVIHQLDKALAKLG-IGQLTAQEVKSACYLRGLNSTHIGEDRCR 323
Query: 237 NWLQNWLSVSENIDRTSYSLLLHCPIFFAYNH 268
WL WL +S ++ SLLLH + + N+
Sbjct: 324 TWLGEWLQISCSLKEAELSLLLHNVVLLSTNY 355
>AF315598-1|AAL26878.1| 304|Homo sapiens cervical cancer
protooncogene-2 protein protein.
Length = 304
Score = 123 bits (297), Expect = 6e-28
Identities = 69/272 (25%), Positives = 138/272 (50%), Gaps = 5/272 (1%)
Query: 1 MYRVFSVGIKDFLRDLKMYITLRIKVARDH-GFSKMSRQEIELYTKMPSDMLRIAPVLIL 59
+Y +F G++ D K ++ + + + F ++ +E+E + D+ + + I+
Sbjct: 29 LYTIFMKGLQMLWADAKKARRIKTNMWKHNIKFHQLPYREMEHLRQFRQDVTKCLFLGII 88
Query: 60 SAIPFGNYIIFPLAFLKPRTLLCSHFWSIQQKVEFSRQELTERLRHNKPVFRSLQAQVEI 119
S PF NY++F L +L PR LL HFW+ +Q+ +F R + + + L+ + +
Sbjct: 89 SIPPFANYLVFLLMYLFPRQLLIRHFWTPKQQTDFLDIYHAFRKQSHPEIISYLEKVIPL 148
Query: 120 IPDGDIKLKWKRVIASLGSGVHPSPKDVLACKDLFTKEPYQLSSLNYAHLGHLLKMHGLR 179
I D ++ + + + G HP+ D+LA ++ F+ P ++ L H+ L + L
Sbjct: 149 ISDAGLRWRLTDLCTKIQRGTHPAIHDILALRECFSNHPLGMNQLQALHVKALSRAMLLT 208
Query: 180 KSI---FRTSKLKYRAFLLLEMDKAIIREGGVNILNAETLRNACHMRGLNGSNLPNQDMR 236
+ +LK ++ ++DKA+ + G + L A+ +++AC++RGLN +++ R
Sbjct: 209 SYLPPPLLRHRLKTHTTVIHQLDKALAKLG-IGQLTAQEVKSACYLRGLNSTHIGEDRCR 267
Query: 237 NWLQNWLSVSENIDRTSYSLLLHCPIFFAYNH 268
WL WL +S ++ SLLLH + + N+
Sbjct: 268 TWLGEWLQISCSLKEAELSLLLHNVVLLSTNY 299
>AF195651-1|AAK34885.1| 360|Homo sapiens cervical cancer 1
protooncogene protein p40 protein.
Length = 360
Score = 123 bits (297), Expect = 6e-28
Identities = 69/272 (25%), Positives = 138/272 (50%), Gaps = 5/272 (1%)
Query: 1 MYRVFSVGIKDFLRDLKMYITLRIKVARDH-GFSKMSRQEIELYTKMPSDMLRIAPVLIL 59
+Y +F G++ D K ++ + + + F ++ +E+E + D+ + + I+
Sbjct: 85 LYTIFMKGLQMLWADAKKARRIKTNMWKHNIKFHQLPYREMEHLRQFRQDVTKCLFLGII 144
Query: 60 SAIPFGNYIIFPLAFLKPRTLLCSHFWSIQQKVEFSRQELTERLRHNKPVFRSLQAQVEI 119
S PF NY++F L +L PR LL HFW+ +Q+ +F R + + + L+ + +
Sbjct: 145 SIPPFANYLVFLLMYLFPRQLLIRHFWTPKQQTDFLDIYHAFRKQSHPEIISYLEKVIPL 204
Query: 120 IPDGDIKLKWKRVIASLGSGVHPSPKDVLACKDLFTKEPYQLSSLNYAHLGHLLKMHGLR 179
I D ++ + + + G HP+ D+LA ++ F+ P ++ L H+ L + L
Sbjct: 205 ISDAGLRWRLTDLCTKIQRGTHPAIHDILALRECFSNHPLGMNQLQALHVKALSRAMLLT 264
Query: 180 KSI---FRTSKLKYRAFLLLEMDKAIIREGGVNILNAETLRNACHMRGLNGSNLPNQDMR 236
+ +LK ++ ++DKA+ + G + L A+ +++AC++RGLN +++ R
Sbjct: 265 SYLPPPLLRHRLKTHTTVIHQLDKALAKLG-IGQLTAQEVKSACYLRGLNSTHIGEDRCR 323
Query: 237 NWLQNWLSVSENIDRTSYSLLLHCPIFFAYNH 268
WL WL +S ++ SLLLH + + N+
Sbjct: 324 TWLGEWLQISCSLKEAELSLLLHNVVLLSTNY 355
>AF329277-1|AAL56993.1| 203|Homo sapiens 507e08 protein.
Length = 203
Score = 98.3 bits (234), Expect = 3e-20
Identities = 52/198 (26%), Positives = 101/198 (51%), Gaps = 4/198 (2%)
Query: 74 FLKPRTLLCSHFWSIQQKVEFSRQELTERLRHNKPVFRSLQAQVEIIPDGDIKLKWKRVI 133
+L PR LL HFW+ +Q+ +F R + + + L+ + +I D ++ + +
Sbjct: 2 YLFPRQLLIRHFWTPKQQTDFLDIYHAFRKQSHPEIISYLEKVIPLISDAGLRWRLTDLC 61
Query: 134 ASLGSGVHPSPKDVLACKDLFTKEPYQLSSLNYAHLGHLLKMHGLRKSI---FRTSKLKY 190
+ G HP+ D+LA ++ F+ P ++ L H+ L + L + +LK
Sbjct: 62 TKIQRGTHPAIHDILALRECFSNHPLGMNQLQALHVKALSRAMLLTSYLPPPLLRHRLKT 121
Query: 191 RAFLLLEMDKAIIREGGVNILNAETLRNACHMRGLNGSNLPNQDMRNWLQNWLSVSENID 250
++ ++DKA+ + G + L A+ +++AC++RGLN +++ R WL WL +S ++
Sbjct: 122 HTTVIHQLDKALAKLG-IGQLTAQEVKSACYLRGLNSTHIGEDRCRTWLGEWLQISCSLK 180
Query: 251 RTSYSLLLHCPIFFAYNH 268
SLLLH + + N+
Sbjct: 181 EAELSLLLHNVVLLSTNY 198
>BC000395-1|AAH00395.2| 129|Homo sapiens LETMD1 protein protein.
Length = 129
Score = 64.9 bits (151), Expect = 3e-10
Identities = 34/125 (27%), Positives = 66/125 (52%), Gaps = 4/125 (3%)
Query: 147 VLACKDLFTKEPYQLSSLNYAHLGHLLKMHGLRKSI---FRTSKLKYRAFLLLEMDKAII 203
+LA ++ F+ P ++ L H+ L + L + +LK ++ ++DKA+
Sbjct: 1 ILALRECFSNHPLGMNQLQALHVKALSRAMLLTSYLPPPLLRHRLKTHTTVIHQLDKALA 60
Query: 204 REGGVNILNAETLRNACHMRGLNGSNLPNQDMRNWLQNWLSVSENIDRTSYSLLLHCPIF 263
+ G + L A+ +++AC++RGLN +++ R WL WL +S ++ SLLLH +
Sbjct: 61 KLG-IGQLTAQEVKSACYLRGLNSTHIGEDRCRTWLGEWLQISCSLKEAELSLLLHNVVL 119
Query: 264 FAYNH 268
+ N+
Sbjct: 120 LSTNY 124
>AY173945-1|AAO49715.1| 444|Homo sapiens leucine zipper-EF-hand
containing transmembrane protein 1-like protein protein.
Length = 444
Score = 60.9 bits (141), Expect = 5e-09
Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 13/228 (5%)
Query: 30 HGFSKMSRQEIELYTKMPSDMLRIAPVLILSAIPFGNYIIFPLAFLKPRTLLCSHFWSIQ 89
HG ++R+E + D R+ P ++ +PF +++ L P +L S F S
Sbjct: 109 HG-QVLTRRERRRLLRTCVDFFRLVPFMVFLIVPFMEFLLPVFLKLFPE-MLPSTFESES 166
Query: 90 QKVEFSRQELTERLRHNKPVFRSL--QAQVEIIPDGDIKLKWKRVIASLGSGVHPSPKDV 147
+K E ++++ +L K + ++ A+ GD + + + +G PS K++
Sbjct: 167 KKEEKQKKKMAVKLELAKFLQETMTEMARRNRAKMGDASTQLSSYVKQVQTGHKPSTKEI 226
Query: 148 LACKDLFTKEPYQLSSLNYAHLGHLLKMHGLRKSIFRTSKL-KYRAFLLLEMDKA---II 203
+ LF ++ L L+ L L K+ L F T+ L +++ + L+ KA II
Sbjct: 227 VRFSKLF-EDQLALEHLDRPQLVALCKL--LELQTFGTNNLLRFQLLMKLKSIKADDEII 283
Query: 204 REGGVNILNAETLRNACHMRGLNGSNLPNQDMRNWLQNW--LSVSENI 249
+ GV L+ L+ AC RG+ L + +R L W L + EN+
Sbjct: 284 AKEGVTALSVSELQAACRARGMRSLGLTEEQLRQQLTEWQDLHLKENV 331
>BC021208-1|AAH21208.1| 739|Homo sapiens leucine zipper-EF-hand
containing transmembrane protein 1 protein.
Length = 739
Score = 59.3 bits (137), Expect = 1e-08
Identities = 56/237 (23%), Positives = 109/237 (45%), Gaps = 12/237 (5%)
Query: 15 DLKMYITLRIKVARDHGFSKMSRQEIELYTKMPSDMLRIAPVLILSAIPFGNYIIFPLAF 74
D K+ + ++ H ++ R++ + ++ +D+ R+ P L+ +PF +++ P+A
Sbjct: 174 DTKIAARMLWRILNGHSLTRRERRQ---FLRICADLFRLVPFLVFVVVPFMEFLL-PVAV 229
Query: 75 LKPRTLLCSHFWSIQQKVEFSRQELTERLRHNKPVFRSLQ--AQVEIIPDGDIKLKWKRV 132
+L S F + K E ++EL +L K + +++ A G +
Sbjct: 230 KLFPNMLPSTFETQSLKEERLKKELRVKLELAKFLQDTIEEMALKNKAAKGSATKDFSVF 289
Query: 133 IASLG-SGVHPSPKDVLACKDLFTKEPYQLSSLNYAHLGHLLKMHGLRKSIFRTSKLKYR 191
+ +G PS ++++ LF E L +L L L K+ L+ SI + L+++
Sbjct: 290 FQKIRETGERPSNEEIMRFSKLFEDE-LTLDNLTRPQLVALCKLLELQ-SIGTNNFLRFQ 347
Query: 192 AFLLLEMDKA---IIREGGVNILNAETLRNACHMRGLNGSNLPNQDMRNWLQNWLSV 245
+ L KA +I E GV+ LN + L+ AC RG+ + +R L+ WL +
Sbjct: 348 LTMRLRSIKADDKLIAEEGVDSLNVKELQAACRARGMRALGVTEDRLRGQLKQWLDL 404
>BC019274-1|AAH19274.1| 100|Homo sapiens LETMD1 protein protein.
Length = 100
Score = 59.3 bits (137), Expect = 1e-08
Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 187 KLKYRAFLLLEMDKAIIREGGVNILNAETLRNACHMRGLNGSNLPNQDMRNWLQNWLSVS 246
+LK ++ ++DKA+ + G + L A+ +++AC++RGLN +++ R WL WL +S
Sbjct: 15 RLKTHTTVIHQLDKALAKLG-IGQLTAQEVKSACYLRGLNSTHIGEDRCRTWLGEWLQIS 73
Query: 247 ENIDRTSYSLLLHCPIFFAYNH 268
++ SLLLH + + N+
Sbjct: 74 CSLKEAELSLLLHNVVLLSTNY 95
>BC014500-1|AAH14500.1| 739|Homo sapiens leucine zipper-EF-hand
containing transmembrane protein 1 protein.
Length = 739
Score = 59.3 bits (137), Expect = 1e-08
Identities = 56/237 (23%), Positives = 109/237 (45%), Gaps = 12/237 (5%)
Query: 15 DLKMYITLRIKVARDHGFSKMSRQEIELYTKMPSDMLRIAPVLILSAIPFGNYIIFPLAF 74
D K+ + ++ H ++ R++ + ++ +D+ R+ P L+ +PF +++ P+A
Sbjct: 174 DTKIAARMLWRILNGHSLTRRERRQ---FLRICADLFRLVPFLVFVVVPFMEFLL-PVAV 229
Query: 75 LKPRTLLCSHFWSIQQKVEFSRQELTERLRHNKPVFRSLQ--AQVEIIPDGDIKLKWKRV 132
+L S F + K E ++EL +L K + +++ A G +
Sbjct: 230 KLFPNMLPSTFETQSLKEERLKKELRVKLELAKFLQDTIEEMALKNKAAKGSATKDFSVF 289
Query: 133 IASLG-SGVHPSPKDVLACKDLFTKEPYQLSSLNYAHLGHLLKMHGLRKSIFRTSKLKYR 191
+ +G PS ++++ LF E L +L L L K+ L+ SI + L+++
Sbjct: 290 FQKIRETGERPSNEEIMRFSKLFEDE-LTLDNLTRPQLVALCKLLELQ-SIGTNNFLRFQ 347
Query: 192 AFLLLEMDKA---IIREGGVNILNAETLRNACHMRGLNGSNLPNQDMRNWLQNWLSV 245
+ L KA +I E GV+ LN + L+ AC RG+ + +R L+ WL +
Sbjct: 348 LTMRLRSIKADDKLIAEEGVDSLNVKELQAACRARGMRALGVTEDRLRGQLKQWLDL 404
>AF061025-1|AAD13138.1| 739|Homo sapiens leucine zipper-EF-hand
containing transmembrane protein 1 protein.
Length = 739
Score = 59.3 bits (137), Expect = 1e-08
Identities = 56/237 (23%), Positives = 109/237 (45%), Gaps = 12/237 (5%)
Query: 15 DLKMYITLRIKVARDHGFSKMSRQEIELYTKMPSDMLRIAPVLILSAIPFGNYIIFPLAF 74
D K+ + ++ H ++ R++ + ++ +D+ R+ P L+ +PF +++ P+A
Sbjct: 174 DTKIAARMLWRILNGHSLTRRERRQ---FLRICADLFRLVPFLVFVVVPFMEFLL-PVAV 229
Query: 75 LKPRTLLCSHFWSIQQKVEFSRQELTERLRHNKPVFRSLQ--AQVEIIPDGDIKLKWKRV 132
+L S F + K E ++EL +L K + +++ A G +
Sbjct: 230 KLFPNMLPSTFETQSLKEERLKKELRVKLELAKFLQDTIEEMALKNKAAKGSATKDFSVF 289
Query: 133 IASLG-SGVHPSPKDVLACKDLFTKEPYQLSSLNYAHLGHLLKMHGLRKSIFRTSKLKYR 191
+ +G PS ++++ LF E L +L L L K+ L+ SI + L+++
Sbjct: 290 FQKIRETGERPSNEEIMRFSKLFEDE-LTLDNLTRPQLVALCKLLELQ-SIGTNNFLRFQ 347
Query: 192 AFLLLEMDKA---IIREGGVNILNAETLRNACHMRGLNGSNLPNQDMRNWLQNWLSV 245
+ L KA +I E GV+ LN + L+ AC RG+ + +R L+ WL +
Sbjct: 348 LTMRLRSIKADDKLIAEEGVDSLNVKELQAACRARGMRALGVTEDRLRGQLKQWLDL 404
>BC029541-1|AAH29541.2| 277|Homo sapiens LETM2 protein protein.
Length = 277
Score = 46.8 bits (106), Expect = 8e-05
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 123 GDIKLKWKRVIASLGSGVHPSPKDVLACKDLFTKEPYQLSSLNYAHLGHLLKMHGLRKSI 182
GD + + + +G PS K+++ LF ++ L L+ L L K+ L
Sbjct: 35 GDASTQLSSYVKQVQTGHKPSTKEIVRFSKLF-EDQLALEHLDRPQLVALCKL--LELQT 91
Query: 183 FRTSKL-KYRAFLLLEMDKA---IIREGGVNILNAETLRNACHMRGLNGSNLPNQDMRNW 238
F T+ L +++ + L+ KA II + GV L+ L+ AC RG+ L + +R
Sbjct: 92 FGTNNLLRFQLLMKLKSIKADDEIIAKEGVTALSVSELQAACRARGMRSLGLTEEQLRQQ 151
Query: 239 LQNW--LSVSENI 249
L W L + EN+
Sbjct: 152 LTEWQDLHLKENV 164
>AK058138-1|BAB71680.1| 396|Homo sapiens protein ( Homo sapiens
cDNA FLJ25409 fis, clone TST03074. ).
Length = 396
Score = 46.8 bits (106), Expect = 8e-05
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 123 GDIKLKWKRVIASLGSGVHPSPKDVLACKDLFTKEPYQLSSLNYAHLGHLLKMHGLRKSI 182
GD + + + +G PS K+++ LF ++ L L+ L L K+ L
Sbjct: 154 GDASTQLSSYVKQVQTGHKPSTKEIVRFSKLF-EDQLALEHLDRPQLVALCKL--LELQT 210
Query: 183 FRTSKL-KYRAFLLLEMDKA---IIREGGVNILNAETLRNACHMRGLNGSNLPNQDMRNW 238
F T+ L +++ + L+ KA II + GV L+ L+ AC RG+ L + +R
Sbjct: 211 FGTNNLLRFQLLMKLKSIKADDEIIAKEGVTALSVSELQAACRARGMRSLGLTEEQLRQQ 270
Query: 239 LQNW--LSVSENI 249
L W L + EN+
Sbjct: 271 LTEWQDLHLKENV 283
>CR456605-1|CAG30491.1| 707|Homo sapiens Em:U62317.9 protein.
Length = 707
Score = 31.1 bits (67), Expect = 4.4
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Query: 191 RAFLLLEMDKAIIREGGVNILNAETLRNACHMR----GLNGSNLPNQDMRNWLQNWLSVS 246
+ FL + D ++ G + +L A LR A H + G LP++D+ WL WL
Sbjct: 119 QVFLYFQWDSLLLETGFLAVLVAP-LRPASHRKEAPQGRQAGALPHEDLPFWLVRWLLFR 177
Query: 247 ENIDRTSYSLLLHCPIFF 264
L CP ++
Sbjct: 178 LMFASGVVKLTSRCPAWW 195
>BC021143-1|AAH21143.1| 707|Homo sapiens TMEM112B protein protein.
Length = 707
Score = 31.1 bits (67), Expect = 4.4
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Query: 191 RAFLLLEMDKAIIREGGVNILNAETLRNACHMR----GLNGSNLPNQDMRNWLQNWLSVS 246
+ FL + D ++ G + +L A LR A H + G LP++D+ WL WL
Sbjct: 119 QVFLYFQWDSLLLETGFLAVLVAP-LRPASHRKEAPQGRQAGALPHEDLPFWLVRWLLFR 177
Query: 247 ENIDRTSYSLLLHCPIFF 264
L CP ++
Sbjct: 178 LMFASGVVKLTSRCPAWW 195
>BC014652-1|AAH14652.1| 682|Homo sapiens transmembrane protein 112B
protein.
Length = 682
Score = 31.1 bits (67), Expect = 4.4
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Query: 191 RAFLLLEMDKAIIREGGVNILNAETLRNACHMR----GLNGSNLPNQDMRNWLQNWLSVS 246
+ FL + D ++ G + +L A LR A H + G LP++D+ WL WL
Sbjct: 94 QVFLYFQWDSLLLETGFLAVLVAP-LRPASHRKEAPQGRQAGALPHEDLPFWLVRWLLFR 152
Query: 247 ENIDRTSYSLLLHCPIFF 264
L CP ++
Sbjct: 153 LMFASGVVKLTSRCPAWW 170
>BC002942-1|AAH02942.2| 707|Homo sapiens TMEM112B protein protein.
Length = 707
Score = 31.1 bits (67), Expect = 4.4
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Query: 191 RAFLLLEMDKAIIREGGVNILNAETLRNACHMR----GLNGSNLPNQDMRNWLQNWLSVS 246
+ FL + D ++ G + +L A LR A H + G LP++D+ WL WL
Sbjct: 119 QVFLYFQWDSLLLETGFLAVLVAP-LRPASHRKEAPQGRQAGALPHEDLPFWLVRWLLFR 177
Query: 247 ENIDRTSYSLLLHCPIFF 264
L CP ++
Sbjct: 178 LMFASGVVKLTSRCPAWW 195
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.326 0.140 0.430
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,968,699
Number of Sequences: 224733
Number of extensions: 1560314
Number of successful extensions: 6466
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 6439
Number of HSP's gapped (non-prelim): 16
length of query: 276
length of database: 73,234,838
effective HSP length: 89
effective length of query: 187
effective length of database: 53,233,601
effective search space: 9954683387
effective search space used: 9954683387
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 65 (30.3 bits)
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