Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002134-TA|BGIBMGA002134-PA|undefined
(81 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41021-3|AAV28352.1| 317|Caenorhabditis elegans Mechanosensory ... 95 7e-21
U41021-2|AAM54192.1| 392|Caenorhabditis elegans Mechanosensory ... 95 7e-21
U41021-1|AAA82333.1| 481|Caenorhabditis elegans Mechanosensory ... 95 7e-21
U26736-1|AAA87552.1| 481|Caenorhabditis elegans MEC-2 protein. 95 7e-21
U26735-1|AAA87551.1| 481|Caenorhabditis elegans MEC-2 protein. 95 7e-21
Z66565-9|CAB76415.1| 281|Caenorhabditis elegans Hypothetical pr... 80 2e-16
AL032659-2|CAB82215.1| 281|Caenorhabditis elegans Hypothetical ... 80 2e-16
AL032659-1|CAA21750.1| 298|Caenorhabditis elegans Hypothetical ... 80 2e-16
U55375-2|AAC69044.2| 285|Caenorhabditis elegans Uncoordinated p... 78 6e-16
EF538426-1|ABQ08183.1| 289|Caenorhabditis elegans stomatin-like... 78 6e-16
U29378-2|AAA68723.2| 330|Caenorhabditis elegans Stomatin protei... 66 4e-12
U40409-9|AAA81390.3| 314|Caenorhabditis elegans Stomatin protei... 62 5e-11
AC006638-3|AAK85483.1| 367|Caenorhabditis elegans Stomatin prot... 60 2e-10
Z66564-4|CAA91476.1| 267|Caenorhabditis elegans Hypothetical pr... 55 5e-09
Z92781-3|CAB07182.1| 326|Caenorhabditis elegans Hypothetical pr... 26 2.7
Z82284-3|CAB05293.1| 350|Caenorhabditis elegans Hypothetical pr... 25 6.3
>U41021-3|AAV28352.1| 317|Caenorhabditis elegans Mechanosensory
abnormality protein2, isoform c protein.
Length = 317
Score = 94.7 bits (225), Expect = 7e-21
Identities = 44/56 (78%), Positives = 53/56 (94%)
Query: 20 GEQKASRALREASEVIGDSPAALQLRYLQTLNTISAEKNSTIVFPLPIDLLTYFIK 75
GEQKASRAL+EA+EVI +SP+ALQLRYLQTLN+ISAEKNSTI+FP PIDLL+ F++
Sbjct: 238 GEQKASRALKEAAEVIAESPSALQLRYLQTLNSISAEKNSTIIFPFPIDLLSAFLQ 293
>U41021-2|AAM54192.1| 392|Caenorhabditis elegans Mechanosensory
abnormality protein2, isoform b protein.
Length = 392
Score = 94.7 bits (225), Expect = 7e-21
Identities = 44/56 (78%), Positives = 53/56 (94%)
Query: 20 GEQKASRALREASEVIGDSPAALQLRYLQTLNTISAEKNSTIVFPLPIDLLTYFIK 75
GEQKASRAL+EA+EVI +SP+ALQLRYLQTLN+ISAEKNSTI+FP PIDLL+ F++
Sbjct: 313 GEQKASRALKEAAEVIAESPSALQLRYLQTLNSISAEKNSTIIFPFPIDLLSAFLQ 368
>U41021-1|AAA82333.1| 481|Caenorhabditis elegans Mechanosensory
abnormality protein2, isoform a protein.
Length = 481
Score = 94.7 bits (225), Expect = 7e-21
Identities = 44/56 (78%), Positives = 53/56 (94%)
Query: 20 GEQKASRALREASEVIGDSPAALQLRYLQTLNTISAEKNSTIVFPLPIDLLTYFIK 75
GEQKASRAL+EA+EVI +SP+ALQLRYLQTLN+ISAEKNSTI+FP PIDLL+ F++
Sbjct: 313 GEQKASRALKEAAEVIAESPSALQLRYLQTLNSISAEKNSTIIFPFPIDLLSAFLQ 368
>U26736-1|AAA87552.1| 481|Caenorhabditis elegans MEC-2 protein.
Length = 481
Score = 94.7 bits (225), Expect = 7e-21
Identities = 44/56 (78%), Positives = 53/56 (94%)
Query: 20 GEQKASRALREASEVIGDSPAALQLRYLQTLNTISAEKNSTIVFPLPIDLLTYFIK 75
GEQKASRAL+EA+EVI +SP+ALQLRYLQTLN+ISAEKNSTI+FP PIDLL+ F++
Sbjct: 313 GEQKASRALKEAAEVIAESPSALQLRYLQTLNSISAEKNSTIIFPFPIDLLSAFLQ 368
>U26735-1|AAA87551.1| 481|Caenorhabditis elegans MEC-2 protein.
Length = 481
Score = 94.7 bits (225), Expect = 7e-21
Identities = 44/56 (78%), Positives = 53/56 (94%)
Query: 20 GEQKASRALREASEVIGDSPAALQLRYLQTLNTISAEKNSTIVFPLPIDLLTYFIK 75
GEQKASRAL+EA+EVI +SP+ALQLRYLQTLN+ISAEKNSTI+FP PIDLL+ F++
Sbjct: 313 GEQKASRALKEAAEVIAESPSALQLRYLQTLNSISAEKNSTIIFPFPIDLLSAFLQ 368
>Z66565-9|CAB76415.1| 281|Caenorhabditis elegans Hypothetical
protein Y71H9A.3 protein.
Length = 281
Score = 79.8 bits (188), Expect = 2e-16
Identities = 36/57 (63%), Positives = 48/57 (84%)
Query: 20 GEQKASRALREASEVIGDSPAALQLRYLQTLNTISAEKNSTIVFPLPIDLLTYFIKA 76
GEQ ASRAL +A++VI SP A+QLRYLQTLN+IS+EKN+TI+FP P +L+ FI++
Sbjct: 222 GEQLASRALADAADVIATSPCAIQLRYLQTLNSISSEKNNTIIFPFPTELIAKFIQS 278
>AL032659-2|CAB82215.1| 281|Caenorhabditis elegans Hypothetical
protein Y71H9A.3 protein.
Length = 281
Score = 79.8 bits (188), Expect = 2e-16
Identities = 36/57 (63%), Positives = 48/57 (84%)
Query: 20 GEQKASRALREASEVIGDSPAALQLRYLQTLNTISAEKNSTIVFPLPIDLLTYFIKA 76
GEQ ASRAL +A++VI SP A+QLRYLQTLN+IS+EKN+TI+FP P +L+ FI++
Sbjct: 222 GEQLASRALADAADVIATSPCAIQLRYLQTLNSISSEKNNTIIFPFPTELIAKFIQS 278
>AL032659-1|CAA21750.1| 298|Caenorhabditis elegans Hypothetical
protein Y71H9A.2 protein.
Length = 298
Score = 79.8 bits (188), Expect = 2e-16
Identities = 37/62 (59%), Positives = 51/62 (82%)
Query: 20 GEQKASRALREASEVIGDSPAALQLRYLQTLNTISAEKNSTIVFPLPIDLLTYFIKAREE 79
GE+ AS AL EA++VI SP A+QLRYLQTLN+IS+EKN+TIVFP P+++++ FIK + +
Sbjct: 227 GEKNASTALAEAADVISMSPCAIQLRYLQTLNSISSEKNNTIVFPFPMEMMSRFIKRQGK 286
Query: 80 SV 81
V
Sbjct: 287 HV 288
>U55375-2|AAC69044.2| 285|Caenorhabditis elegans Uncoordinated
protein 1 protein.
Length = 285
Score = 78.2 bits (184), Expect = 6e-16
Identities = 36/56 (64%), Positives = 48/56 (85%)
Query: 20 GEQKASRALREASEVIGDSPAALQLRYLQTLNTISAEKNSTIVFPLPIDLLTYFIK 75
GEQKASRAL+EA++VI +P ALQLR+LQ LN+I+AE NSTIVFP+P+++ F+K
Sbjct: 227 GEQKASRALKEAADVIQANPVALQLRHLQALNSIAAEHNSTIVFPVPVEMFGAFMK 282
>EF538426-1|ABQ08183.1| 289|Caenorhabditis elegans stomatin-like
protein UNC-1 protein.
Length = 289
Score = 78.2 bits (184), Expect = 6e-16
Identities = 36/56 (64%), Positives = 48/56 (85%)
Query: 20 GEQKASRALREASEVIGDSPAALQLRYLQTLNTISAEKNSTIVFPLPIDLLTYFIK 75
GEQKASRAL+EA++VI +P ALQLR+LQ LN+I+AE NSTIVFP+P+++ F+K
Sbjct: 231 GEQKASRALKEAADVIQANPVALQLRHLQALNSIAAEHNSTIVFPVPVEMFGAFMK 286
>U29378-2|AAA68723.2| 330|Caenorhabditis elegans Stomatin protein 1
protein.
Length = 330
Score = 65.7 bits (153), Expect = 4e-12
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 20 GEQKASRALREASEVIGDSPAALQLRYLQTLNTISAEKNSTIVFPLPIDLL 70
GE +AS AL EA+ +I S A+QLRYL TLN IS+EK STI+FP P+++L
Sbjct: 235 GELRASAALAEAATIISKSEGAMQLRYLHTLNAISSEKTSTIIFPFPMEIL 285
>U40409-9|AAA81390.3| 314|Caenorhabditis elegans Stomatin protein 2
protein.
Length = 314
Score = 62.1 bits (144), Expect = 5e-11
Identities = 29/38 (76%), Positives = 34/38 (89%)
Query: 20 GEQKASRALREASEVIGDSPAALQLRYLQTLNTISAEK 57
GEQKASRALR+A+ VI SPAALQLRYLQTLN+++ EK
Sbjct: 265 GEQKASRALRDAASVIAQSPAALQLRYLQTLNSVAREK 302
>AC006638-3|AAK85483.1| 367|Caenorhabditis elegans Stomatin protein
5, isoform a protein.
Length = 367
Score = 60.1 bits (139), Expect = 2e-10
Identities = 26/56 (46%), Positives = 41/56 (73%)
Query: 20 GEQKASRALREASEVIGDSPAALQLRYLQTLNTISAEKNSTIVFPLPIDLLTYFIK 75
GE+ AS +L+ A++ I + +QLRYLQTL ISA++N+TIV P PI++ +++K
Sbjct: 306 GEKDASESLQTAADTIAQNKMTIQLRYLQTLTKISAQRNNTIVMPYPIEVAKHYMK 361
>Z66564-4|CAA91476.1| 267|Caenorhabditis elegans Hypothetical
protein F52D10.5 protein.
Length = 267
Score = 55.2 bits (127), Expect = 5e-09
Identities = 27/51 (52%), Positives = 35/51 (68%)
Query: 20 GEQKASRALREASEVIGDSPAALQLRYLQTLNTISAEKNSTIVFPLPIDLL 70
GE AS A ++A++ + SP ALQLRYLQTL ISA N TIV P P++ +
Sbjct: 211 GELDASMAFQKAADELAGSPTALQLRYLQTLVKISAHDNHTIVVPFPMEYI 261
>Z92781-3|CAB07182.1| 326|Caenorhabditis elegans Hypothetical
protein F09C3.4 protein.
Length = 326
Score = 26.2 bits (55), Expect = 2.7
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 38 SPAALQLRYLQTLNTISAEKNSTIVFPLPIDLLTYFIK 75
S + L+ R T S E+ S ++ LPID+L K
Sbjct: 6 SSSGLKKRIFSTFGKASEERPSLLLLDLPIDILLAITK 43
>Z82284-3|CAB05293.1| 350|Caenorhabditis elegans Hypothetical
protein T27E7.4 protein.
Length = 350
Score = 25.0 bits (52), Expect = 6.3
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 28 LREASEVIGDSPAALQLRYLQTLNTISAEKNSTIVFPLPIDLLTYFIKAR 77
L E V ++ QL Y + +S N +I F +P+ +L YF + R
Sbjct: 204 LSELLPVGANATLKTQLTYSRVFELVS---NDSIFFLVPVTVLYYFYRTR 250
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.315 0.130 0.338
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,154,086
Number of Sequences: 27539
Number of extensions: 29145
Number of successful extensions: 72
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 57
Number of HSP's gapped (non-prelim): 16
length of query: 81
length of database: 12,573,161
effective HSP length: 61
effective length of query: 20
effective length of database: 10,893,282
effective search space: 217865640
effective search space used: 217865640
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 51 (24.6 bits)
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