GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002134-TA|BGIBMGA002134-PA|undefined
         (81 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     23   0.48 
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   1.9  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    19   7.8  

>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 0.48
 Identities = 10/35 (28%), Positives = 18/35 (51%)

Query: 44  LRYLQTLNTISAEKNSTIVFPLPIDLLTYFIKARE 78
           +R +Q   TI  +K    V P+ +  L +F+  R+
Sbjct: 212 IRSIQGTGTIILKKTVCFVIPIMLLFLAFFVSFRK 246


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
          protein.
          Length = 1308

 Score = 21.0 bits (42), Expect = 1.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)

Query: 43 QLRYLQTLNTISAE 56
          QLRYL+ LN +  E
Sbjct: 50 QLRYLEELNALRTE 63


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 19.0 bits (37), Expect = 7.8
 Identities = 7/11 (63%), Positives = 10/11 (90%)

Query: 47  LQTLNTISAEK 57
           L+TLNT+ +EK
Sbjct: 395 LRTLNTLHSEK 405


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.315    0.130    0.338 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,020
Number of Sequences: 429
Number of extensions: 283
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 81
length of database: 140,377
effective HSP length: 47
effective length of query: 34
effective length of database: 120,214
effective search space:  4087276
effective search space used:  4087276
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.7 bits)
S2: 37 (19.0 bits)