Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002132-TA|BGIBMGA002132-PA|IPR000859|CUB
(205 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44095| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_19665| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_21661| Best HMM Match : EGF_CA (HMM E-Value=0) 30 1.2
SB_58882| Best HMM Match : EGF_CA (HMM E-Value=0) 30 1.2
SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_58982| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_27348| Best HMM Match : ShTK (HMM E-Value=4.2e-10) 30 1.6
SB_54597| Best HMM Match : zf-B_box (HMM E-Value=4e-17) 29 2.1
SB_46951| Best HMM Match : CUB (HMM E-Value=1.3e-32) 29 2.1
SB_45368| Best HMM Match : fn2 (HMM E-Value=3.1e-32) 29 2.1
SB_6812| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_4118| Best HMM Match : EGF (HMM E-Value=1.8e-20) 29 2.1
SB_3312| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_42807| Best HMM Match : MSSP (HMM E-Value=3.8) 29 2.7
SB_46903| Best HMM Match : Toxin_15 (HMM E-Value=0) 29 2.7
SB_23022| Best HMM Match : CUB (HMM E-Value=0) 29 3.6
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_36180| Best HMM Match : BRAP2 (HMM E-Value=5.1) 28 4.7
SB_25281| Best HMM Match : DUF497 (HMM E-Value=2) 28 4.7
SB_58702| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.059) 28 6.3
SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_17477| Best HMM Match : PSI (HMM E-Value=1.7) 28 6.3
SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_16935| Best HMM Match : Cadherin (HMM E-Value=0) 28 6.3
SB_15408| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_5376| Best HMM Match : EGF_CA (HMM E-Value=0) 28 6.3
SB_58993| Best HMM Match : EGF_CA (HMM E-Value=0) 27 8.3
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0) 27 8.3
SB_22572| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_11375| Best HMM Match : EGF_CA (HMM E-Value=0) 27 8.3
SB_57080| Best HMM Match : EGF_CA (HMM E-Value=1.4013e-43) 27 8.3
SB_52818| Best HMM Match : CUB (HMM E-Value=1.6e-23) 27 8.3
SB_21795| Best HMM Match : Pox_A_type_inc (HMM E-Value=6) 27 8.3
SB_19340| Best HMM Match : EGF_CA (HMM E-Value=3.8e-27) 27 8.3
SB_2793| Best HMM Match : UBX (HMM E-Value=0.32) 27 8.3
>SB_44095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3051
Score = 30.7 bits (66), Expect = 0.89
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 115 CIFMTSCGSTTSENGTYFVSSAYPSSYDGTGSCELTVIKSHPDVCQIRLDFDRFTIAGPE 174
C + CGST + S +P Y G+ +C V + D I L F+ F + E
Sbjct: 900 CNYSQDCGSTLRASEGTINSPNWPQGYKGSKTCTWRVSVNPSD--SIALFFNSFNL--QE 955
Query: 175 PINHVCNQDQFIV-SGGN----PVPAICGVN 200
N C++ + V GGN + A CG+N
Sbjct: 956 DGN--CDKSKLAVRDGGNESAHEIGAFCGLN 984
>SB_19665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 491
Score = 30.7 bits (66), Expect = 0.89
Identities = 13/31 (41%), Positives = 15/31 (48%)
Query: 82 GASGDNGTCMTARECSTRGGSANGYCANGYG 112
G +GD TC EC+T NG C N G
Sbjct: 236 GYTGDGKTCDDVNECTTNPDICNGECTNYNG 266
>SB_21661| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1202
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Query: 82 GASGDNGTCMTARECSTRGGSANGYCANGYGLCCIFMTSCGSTTSENGTYFVSSAYPSSY 141
G SGD TC+ EC ++ S Y + Y C +C T+ G++F + S
Sbjct: 845 GYSGDGATCIDINECDSK--SLAPYHYDQYAHNCHSDANC---TNTKGSFFCTCHVGYSG 899
Query: 142 DGTGSCELTVIKSHPDVC 159
DG ++ S+ C
Sbjct: 900 DGVKCVDINECTSNTHNC 917
Score = 27.9 bits (59), Expect = 6.3
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 7/68 (10%)
Query: 82 GASGDNGTCMTARECS--TRGGSANGYCANGYGLCCIFMTSCGSTTSENGTYFVSSAYPS 139
G SGD TC EC+ S + C N G F +C NGT +V S
Sbjct: 1069 GYSGDGFTCKDIDECALGIHNCSKDAACINTKG---NFYCTC--LPGYNGTGYVCSDINE 1123
Query: 140 SYDGTGSC 147
DG+ +C
Sbjct: 1124 CLDGSHNC 1131
Score = 27.5 bits (58), Expect = 8.3
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 82 GASGDNGTCMTARECSTRGGSANGYCANGYGLCCIFMTSCGSTTSENGTYFVSSAYPSSY 141
G SGD TC+ EC T +AN + Y C + +C T+ G+++ + S
Sbjct: 82 GYSGDGVTCVDINECRTDTLAAN---HSHYAHNCHYDANC---TNTKGSFYCTCHTGYSG 135
Query: 142 DGTGSCELT 150
DG +++
Sbjct: 136 DGVTCVDIS 144
>SB_58882| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1027
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Query: 82 GASGDNGTCMTARECSTRGGSANGYCANGYGLCCIFMTSCGSTTSENGTYFVSSAYPSSY 141
G SGD TC+ EC ++ S Y + Y C +C T+ G++F + S
Sbjct: 259 GYSGDGATCIDINECDSK--SLAPYHYDQYAHNCHSDANC---TNTKGSFFCTCHVGYSG 313
Query: 142 DGTGSCELTVIKSHPDVC 159
DG ++ S+ C
Sbjct: 314 DGVKCVDINECTSNTHNC 331
Score = 27.9 bits (59), Expect = 6.3
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 7/68 (10%)
Query: 82 GASGDNGTCMTARECS--TRGGSANGYCANGYGLCCIFMTSCGSTTSENGTYFVSSAYPS 139
G SGD TC EC+ S + C N G F +C NGT +V S
Sbjct: 483 GYSGDGFTCKDIDECALGIHNCSKDAACINTKG---NFYCTC--LPGYNGTGYVCSDINE 537
Query: 140 SYDGTGSC 147
DG+ +C
Sbjct: 538 CLDGSHNC 545
>SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3474
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Query: 86 DNGTCMTARECSTRGGSANGYCANGYGLCCIFMTSC 121
DN TC+ ECST + C N G F+ SC
Sbjct: 505 DNTTCLDLDECSTNANNCEQRCTNSLG---SFICSC 537
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 72 VVTFPNGGCAGASGDNGTCMTARECSTRGGSANGYCANGYG 112
+ T P G S D +C+ ECST N C N YG
Sbjct: 377 ICTCPEG--LALSEDGKSCVDVDECSTGANVCNDNCVNLYG 415
>SB_58982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 838
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 79 GCAGASGDNGTCMTARE-CSTRGGSANGYCANGYGLCC 115
GC A D M ++E C+ G A YCA G CC
Sbjct: 402 GCEDALEDCPKYMKSQEQCNLFSGMARKYCARTCGFCC 439
>SB_27348| Best HMM Match : ShTK (HMM E-Value=4.2e-10)
Length = 75
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 79 GCAGASGDNGTCMTARE-CSTRGGSANGYCANGYGLCC 115
GC A D M ++E C+ G A YCA G CC
Sbjct: 2 GCEDALEDCPKYMKSQEQCNLFSGMARKYCARTCGFCC 39
>SB_54597| Best HMM Match : zf-B_box (HMM E-Value=4e-17)
Length = 755
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Query: 79 GCAGASGDNGT--CMTARECSTRGGSANGY--CANGYGL-CCIFMTSCGSTTSENG 129
GCA NG C+T C+ R + NGY C G CC+ + C S NG
Sbjct: 701 GCARCVTMNGCARCVTMNGCA-RCVTINGYPRCVTMNGCTCCVTINGCASCVMMNG 755
>SB_46951| Best HMM Match : CUB (HMM E-Value=1.3e-32)
Length = 194
Score = 29.5 bits (63), Expect = 2.1
Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
Query: 121 CGST-TSENGTYFVSSAYPSSYDGTGSCELTVIKSHPDVCQIRLDFDRFTIA-GPEPINH 178
CG T T +GT F S +PS+Y CE T I + +I + F F + GP
Sbjct: 28 CGGTITGASGT-FSSPNFPSNYPDNAMCEWT-ITAPVGTSRIDIAFPAFDVEWGPS---- 81
Query: 179 VCNQDQFIV--SGGNPV-PAICG 198
C+ D V GN V ICG
Sbjct: 82 -CDWDYLTVKDKAGNQVGDKICG 103
>SB_45368| Best HMM Match : fn2 (HMM E-Value=3.1e-32)
Length = 1206
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 125 TSENGTYFVSSAYPSSYDGTGSCELTVIKSHPDVCQIR-LDFD 166
TS +GT FVS YP+ Y C +I DV ++R L FD
Sbjct: 715 TSPSGT-FVSPRYPNPYPNNIDCVWRIIGDPSDVIRLRILAFD 756
>SB_6812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Query: 121 CGSTTSENGTYFVSSAYPSSYDGTGSCELTVIKSHPDVCQIRLDFDRFTI 170
CG S G S YPS Y C T+ +I L FD F +
Sbjct: 2 CGGAFSGQGGTITSPGYPSKYPNNKKCVWTITAQEGG--RIHLKFDTFQL 49
>SB_4118| Best HMM Match : EGF (HMM E-Value=1.8e-20)
Length = 339
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 11 RFIELATSQDAKEMVHGTGMLNGVSLPKLNRSYKKNYYDI 50
RF E + + + HG G+L GV+ LNR K+ +D+
Sbjct: 193 RFGETCQTVNYNKKSHGDGLLKGVAQASLNRLVKELDFDV 232
>SB_3312| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 769
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Query: 131 YFVSSAYPSSYDGTGSCELTVIKSHPDVCQIRLDFDRFTIAGPEPINHVCNQDQFIVSGG 190
+ V S+ + YD GS T + H +C+ + I + I+ CN+ +VS G
Sbjct: 310 FHVRSSVQAVYDWAGSVSATPL--HFQLCK----YPNTVIYPSDEISQACNEILNVVSRG 363
Query: 191 NPVP 194
PVP
Sbjct: 364 QPVP 367
>SB_42807| Best HMM Match : MSSP (HMM E-Value=3.8)
Length = 142
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 88 GTCMTARECSTRGGSANGYCANGYGLCCIFMTSCGSTTSENG 129
GTC T R + G+ G C+ G G+ CG+ ++ G
Sbjct: 65 GTCSTGRGMPHKIGAGCGTCSTGRGMTHKIGAGCGTCSTGRG 106
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 88 GTCMTARECSTRGGSANGYCANGYGLCCIFMTSCGSTTSENG 129
GTC T R + + G+ G C+ G G+ CG+ ++ G
Sbjct: 82 GTCSTGRGMTHKIGAGCGTCSTGRGMPHEIGAGCGTCSTGRG 123
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 88 GTCMTARECSTRGGSANGYCANGYGLCCIFMTSCGSTTSENG 129
GTC T R + G+ G C+ G G+ CG+ ++ G
Sbjct: 14 GTCSTGRGMPHKIGAGCGTCSTGRGMPHKIEAGCGTCSTGRG 55
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 88 GTCMTARECSTRGGSANGYCANGYGLCCIFMTSCGSTTSENG-TYFVSSAYPSSYDGTG 145
GTC T R + G+ G C+ G G+ CG+ ++ G T+ + + + G G
Sbjct: 48 GTCSTGRGMPHKIGAGCGTCSTGRGMPHKIGAGCGTCSTGRGMTHKIGAGCGTCSTGRG 106
>SB_46903| Best HMM Match : Toxin_15 (HMM E-Value=0)
Length = 361
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/54 (31%), Positives = 23/54 (42%)
Query: 40 NRSYKKNYYDIKQERRFWPAAPKESRFLSLFTVVTFPNGGCAGASGDNGTCMTA 93
N YK + D +F K+ + +L V + P G C A GD G M A
Sbjct: 137 NVDYKPHQDDYSSAEKFLTHFNKKCKNQTLALVSSRPEGRCVAACGDFGLVMKA 190
>SB_23022| Best HMM Match : CUB (HMM E-Value=0)
Length = 1307
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 120 SCGSTTSENGTYFVSSAYPSSYDGTGSCELTVIKSHPDVCQIRLDFDRFTIAGPEPINHV 179
+CG S S +YP+SY C + + P +I L F+ F + G N V
Sbjct: 2 ACGGVLSNGNGTITSPSYPASYPKNKRCLWRI--TGPSGQRISLKFNDFRLEGNG--NGV 57
Query: 180 CNQD 183
C D
Sbjct: 58 CRYD 61
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Query: 121 CGSTTSENGTYFVSSAYPSSYDGTGSCELTVIKSHPDVCQIRLDFDRFTI 170
CG S G S YPS Y C T+ +I L FD F +
Sbjct: 191 CGGAFSGQGGTITSPGYPSKYPKNKKCVWTITAQEGG--RIHLKFDTFQL 238
>SB_36180| Best HMM Match : BRAP2 (HMM E-Value=5.1)
Length = 751
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Query: 86 DNGTCMTARECSTRGGSANGYCANGYG---LCCIFMTSCGSTTSENGTYFVSSAYPSSY 141
D G C AR+ + G AN N G + + +T G T + Y V + Y Y
Sbjct: 350 DRGHCDVARQPDSGDGQANNTVVNNVGRNLVSRLKITFAGETLQDTNPYDVFNTYEELY 408
>SB_25281| Best HMM Match : DUF497 (HMM E-Value=2)
Length = 754
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Query: 86 DNGTCMTARECSTRGGSANGYCANGYG---LCCIFMTSCGSTTSENGTYFVSSAYPSSY 141
D G C AR+ + G AN N G + + +T G T + Y V + Y Y
Sbjct: 376 DRGHCDVARQPDSGDGQANNTVVNNVGRNLVSRLKITFAGETLQDTNPYDVFNTYEELY 434
>SB_58702| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.059)
Length = 765
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/65 (29%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Query: 82 GASGDNGTCMTARECSTRGGSANGYCANGYGLCCIFMTSCGSTTSENGTYFVSSAYPSSY 141
G G G M R+ + RG N GYG FM S SS+ +S
Sbjct: 261 GRGGSRGA-MNPRKRALRGSGRNSMSPRGYGYSMAFMDPVSKPESSESLATTSSSPTTSA 319
Query: 142 DGTGS 146
T S
Sbjct: 320 SITAS 324
>SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 95 ECSTRGGSANGYCANGYGLCCIFMTSCGSTTSENGTYFVSSAYPSSYDGTG 145
+ S GSA +C G C I CG+ +GT SS + ++ G G
Sbjct: 745 DASEHCGSAAQHCGTNAGYCGIPSNHCGTPLETSGT---SSGHYRTFRGLG 792
>SB_17477| Best HMM Match : PSI (HMM E-Value=1.7)
Length = 206
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Query: 79 GCAGASGDNGT--CMTARECS---TRGGSANGYCANGYGLCCIFMTSCGSTTSENG 129
GCA NG C+T C+ T G A NG LCC+ M C + NG
Sbjct: 143 GCARCVTMNGCPRCVTMNGCARCVTIYGCARCVTMNGC-LCCVTMNGCTCCVTING 197
>SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4924
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Query: 117 FMTSCGSTTSENGTYFVSSAYPSSYDGTGSCELTVIKSHPDVCQIRLDFDRFTI 170
F+ CG+ + S YP SY G C +T+ D I++ F F I
Sbjct: 1433 FLDQCGAILTAPIGLITSPNYPESYPGNELCNMTI---KVDKGPIKVAFQSFDI 1483
>SB_16935| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2204
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
Query: 85 GDNGTCMTARECSTRGGSANGYCANGYG-LCCIFMTSCGSTTSENG 129
GD TC ECS G +C N G CI G +NG
Sbjct: 66 GDGFTCRDVNECSQSGHGCEQHCMNTVGSYTCI--CELGYKLGQNG 109
>SB_15408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 779
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 77 NGGCAGASGD-NGTCMTARECSTRGGSANGYCANGYGLCCIF 117
NG C G TC + S G G C YG+ CI+
Sbjct: 314 NGRCVNTEGSYKCTCNNGYKPSPDGKRCVGRCGRVYGVVCIY 355
>SB_5376| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1705
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 82 GASGDNGTCMTARECSTRGGSANGYCANGYGLCCIFMTSCGSTTSENGTYFVSSAYPSSY 141
G SGD TC+ EC T +AN + Y C + +C T+ G+++ + S
Sbjct: 1606 GYSGDGVTCVDINECRTDTLAAN---HSHYAHNCHYDANC---TNTKGSFYCTCHTGYSG 1659
Query: 142 DGTGSCELTVIKS 154
DG +++ S
Sbjct: 1660 DGVTCVDISECNS 1672
Score = 27.5 bits (58), Expect = 8.3
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
Query: 82 GASGDNGTCMTARECSTRGGSANGYCANGYGLCCIFMTSCGSTTSENGTYFVSSAYPSSY 141
G SGD TC+ EC+ SAN + Y C +C T+ G+++ + + Y
Sbjct: 1315 GYSGDGVTCVDINECNPFALSAN---HSHYAHNCHSDANC---TNTKGSFYCTC--HTGY 1366
Query: 142 DGTGSCELTVIKSHPD 157
G G + + + PD
Sbjct: 1367 SGNGVICIDINECKPD 1382
>SB_58993| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 541
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Query: 82 GASGDNGTCMTARECSTRGG-SANGYCAN 109
G GD TC EC R G NG C N
Sbjct: 340 GYRGDGRTCTDINECQERRGLCRNGACVN 368
>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 921
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/27 (40%), Positives = 11/27 (40%)
Query: 86 DNGTCMTARECSTRGGSANGYCANGYG 112
DN TC EC T G C N G
Sbjct: 430 DNKTCEDINECETSNGGCEHRCVNDKG 456
>SB_22572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 537
Score = 27.5 bits (58), Expect = 8.3
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Query: 79 GCAGASGDNGT--CMTARECSTRGGSANGY--CANGYGL-CCIFMTSCGSTTSENG 129
GCA NG C+T C+ + NGY C G CC+ + C S NG
Sbjct: 483 GCARCVTMNGCPRCVTMNGCA-HCVTMNGYPRCVTMNGCTCCVTINGCASCVMMNG 537
>SB_11375| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 651
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 86 DNGTCMTARECSTRGGSANGYCANGYG 112
DN TC EC T G+ + C N G
Sbjct: 97 DNTTCADINECVTSNGNCSHTCVNWEG 123
>SB_57080| Best HMM Match : EGF_CA (HMM E-Value=1.4013e-43)
Length = 360
Score = 27.5 bits (58), Expect = 8.3
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Query: 71 TVVTFPNGGCAGASGDNGTCMTARECS--TRGGSANGYCANGYGLCCIFMTSCGSTTSEN 128
TV +F AG +G+ TC EC+ + S N C N G F +C + + N
Sbjct: 166 TVGSFTCACNAGYTGNGHTCQDTNECADGSHTCSINAACTNTVG---SFTCACNAGYTGN 222
Query: 129 G 129
G
Sbjct: 223 G 223
Score = 27.5 bits (58), Expect = 8.3
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Query: 71 TVVTFPNGGCAGASGDNGTCMTARECS--TRGGSANGYCANGYGLCCIFMTSCGSTTSEN 128
TV +F AG +G+ TC EC+ + S N C N G F +C + + N
Sbjct: 207 TVGSFTCACNAGYTGNGHTCQDTNECADGSHTCSINAACTNTVG---SFTCACNAGYTGN 263
Query: 129 G 129
G
Sbjct: 264 G 264
>SB_52818| Best HMM Match : CUB (HMM E-Value=1.6e-23)
Length = 898
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 110 GYGLCCIFMTSCGSTTSENGTYFVSSAYPSSYDGTGSCELTVIKSHPDVCQIRLDFDRFT 169
G+ + + TSC T ++ F S +PS+Y C ++ + IR+ F F+
Sbjct: 209 GHQIHYCYYTSCNYTLTDRHGSFQSPYFPSNYPNGQLCSWRIMGIEGE--SIRVRFSNFS 266
Query: 170 IA 171
++
Sbjct: 267 LS 268
>SB_21795| Best HMM Match : Pox_A_type_inc (HMM E-Value=6)
Length = 158
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 156 PDVCQIRLDFDRFTIAGPEPINHVCNQDQFIVSGGNPVPAICGVNQG 202
P+ QI D + T+ P P+N N ++ G + +P I V G
Sbjct: 78 PNNSQITSDATKTTVILPLPVNTTDNFGNPLIEGNSYIPVILSVATG 124
>SB_19340| Best HMM Match : EGF_CA (HMM E-Value=3.8e-27)
Length = 888
Score = 27.5 bits (58), Expect = 8.3
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Query: 71 TVVTFPNGGCAGASGDNGTCMTARECS--TRGGSANGYCANGYGLCCIFMTSCGSTTSEN 128
TV +F AG +G+ TC EC+ + S N C N G F +C + + N
Sbjct: 700 TVGSFTCACNAGYTGNGHTCQDTNECTDGSHTCSINAACTNTVG---SFTCACNAGYTGN 756
Query: 129 G 129
G
Sbjct: 757 G 757
>SB_2793| Best HMM Match : UBX (HMM E-Value=0.32)
Length = 311
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 131 YFVSSAYPSSYDGTGSCELTVIKSHPDVCQIRLDFDRFTIAGPEPINHVCNQDQFIVSGG 190
+++ S+ + YD GS T + + +C+ + I + I+ CN+ +VS G
Sbjct: 137 FYLRSSVQAVYDWAGSVSATPL--YFQLCK----YPNTVIYPSDEISQACNEILNVVSRG 190
Query: 191 NPVP 194
PVP
Sbjct: 191 QPVP 194
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.321 0.137 0.438
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,873,398
Number of Sequences: 59808
Number of extensions: 350528
Number of successful extensions: 857
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 802
Number of HSP's gapped (non-prelim): 83
length of query: 205
length of database: 16,821,457
effective HSP length: 79
effective length of query: 126
effective length of database: 12,096,625
effective search space: 1524174750
effective search space used: 1524174750
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 58 (27.5 bits)
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