GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002130-TA|BGIBMGA002130-PA|undefined
         (68 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL009195-1|CAA15708.1| 3345|Drosophila melanogaster EG:30B8.4,FB...    28   1.8  
AE014298-365|AAF45756.2| 3433|Drosophila melanogaster CG3443-PB ...    28   1.8  
AE014134-1856|AAS64674.1| 1429|Drosophila melanogaster CG33304-P...    26   7.4  

>AL009195-1|CAA15708.1| 3345|Drosophila melanogaster
            EG:30B8.4,FBgn0003048;pcx protein.
          Length = 3345

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)

Query: 4    EAGEYDP-NVETIMWFRKLRASRPVPQRPELGPAIIVDGAIAHVEDSIIVAK 54
            E G+++  N   IMWF KL     V +R  L P + +    A  +  +IVAK
Sbjct: 1869 EFGQFEVLNAPKIMWFEKLYIYLSVLERNVLFPLLAISSLTA--DSQLIVAK 1918


>AE014298-365|AAF45756.2| 3433|Drosophila melanogaster CG3443-PB
            protein.
          Length = 3433

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)

Query: 4    EAGEYDP-NVETIMWFRKLRASRPVPQRPELGPAIIVDGAIAHVEDSIIVAK 54
            E G+++  N   IMWF KL     V +R  L P + +    A  +  +IVAK
Sbjct: 1896 EFGQFEVLNAPKIMWFEKLYIYLSVLERNVLFPLLAISSLTA--DSQLIVAK 1945


>AE014134-1856|AAS64674.1| 1429|Drosophila melanogaster CG33304-PA
            protein.
          Length = 1429

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)

Query: 27   VPQRPELGPAIIVDGAIA 44
            VP RPE+GP+  + G +A
Sbjct: 1151 VPHRPEVGPSASLSGVVA 1168


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.318    0.135    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,294,131
Number of Sequences: 52641
Number of extensions: 106334
Number of successful extensions: 200
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 199
Number of HSP's gapped (non-prelim): 3
length of query: 68
length of database: 24,830,863
effective HSP length: 48
effective length of query: 20
effective length of database: 22,304,095
effective search space: 446081900
effective search space used: 446081900
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)