Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002129-TA|BGIBMGA002129-PA|undefined
(328 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56890| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 1e-14
SB_28690| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 1e-13
SB_16861| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 9e-11
SB_50697| Best HMM Match : C2 (HMM E-Value=0.59) 44 1e-04
SB_2497| Best HMM Match : C2 (HMM E-Value=2.3e-06) 43 3e-04
SB_3201| Best HMM Match : C2 (HMM E-Value=0.0019) 36 0.034
SB_51331| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.046
SB_41789| Best HMM Match : Mucin (HMM E-Value=0.56) 33 0.24
SB_41192| Best HMM Match : Mucin (HMM E-Value=0.56) 33 0.24
SB_9453| Best HMM Match : Mucin (HMM E-Value=0.56) 33 0.24
SB_36603| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_39409| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_7857| Best HMM Match : GETHR (HMM E-Value=1.5) 31 1.7
SB_6197| Best HMM Match : C2 (HMM E-Value=3.7e-24) 31 1.7
SB_25082| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_16343| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_9229| Best HMM Match : LRR_1 (HMM E-Value=0.038) 29 6.9
SB_17627| Best HMM Match : F_actin_cap_B (HMM E-Value=0) 29 6.9
>SB_56890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1665
Score = 77.8 bits (183), Expect = 1e-14
Identities = 44/88 (50%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
Query: 216 SGSIADRKENICLSILHKWHTLPIIGHHLVPEHVETRSLFNPEKLGFEQGKIQMWVDIYP 275
SG E L L ++ TL G LVPEHVETR+LFNPEK G EQGK++MWVD++P
Sbjct: 1555 SGHWKQSDEPSALRCLKQFQTLKR-GFTLVPEHVETRALFNPEKPGVEQGKLEMWVDMFP 1613
Query: 276 MENGVYIP-PPVNIEPQKVEDYALKAII 302
M+ + P PV+I P+K Y L+ II
Sbjct: 1614 MD--MPSPGAPVDITPRKPTSYELRVII 1639
Score = 65.3 bits (152), Expect = 7e-11
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 96 EDSTRFFSEIKVYDAELEKQPEFSKFKDWCSTFKLYNGNKTGIPEKDDQIFCGYLKAGIA 155
E + + ++ ELE +F+ F DW +F L+ G KT + DD G K +
Sbjct: 1261 EKRKKAIPRLNIFKLELECMHDFNGFNDWLHSFPLFRGKKTSEDDDDDHRIVGKFKGSLK 1320
Query: 156 IYKWPPPENTKSVSTGGVDLGKGYFSNYPSNEAAKVLVRVYL 197
++K+P PE+ + +D G F PSNE VLVRVY+
Sbjct: 1321 VWKYPLPEHVE------MDPIVGTFLKLPSNEPVNVLVRVYV 1356
Score = 33.9 bits (74), Expect = 0.18
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 39 GNFGLIGRSEITPAVDER-QGYE---YAPNLEWFKIHNGMECTGQILMSVQLIQDNDLPY 94
G+ IGR+ P V + YE + P LEWF++ G E G++L + +L+Q +LP
Sbjct: 1059 GDSEFIGRALARPIVKMACEPYEKPFFPPALEWFQVCRGEENAGEMLAAFELLQ--ELPE 1116
Query: 95 TE 96
E
Sbjct: 1117 NE 1118
>SB_28690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2179
Score = 74.5 bits (175), Expect = 1e-13
Identities = 35/68 (51%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Query: 235 HTLPIIGHHLVPEHVETRSLFNPEKLGFEQGKIQMWVDIYPMENGVYIPPPVNIEPQKVE 294
H L +G +VPEHVETR L++P + EQGK+Q+WVDI+P G I PP+ IEP+K +
Sbjct: 1812 HALHAMG--MVPEHVETRPLYSPLQPRIEQGKLQLWVDIFPCTEG-SIKPPIEIEPRKPK 1868
Query: 295 DYALKAII 302
D+ L+ II
Sbjct: 1869 DFVLRVII 1876
Score = 32.3 bits (70), Expect = 0.56
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 38 MGNFGLIGRSEITPAVDERQGYEYAPNLEWFKIHNGMECTGQILMSVQL 86
+G +GR I P + ++ G + P+L W+ + G G++L + +L
Sbjct: 1337 VGKDDFMGRCLIKPLLQDKDG-AHPPSLSWYTVQRGDSTAGEVLAACEL 1384
>SB_16861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2214
Score = 64.9 bits (151), Expect = 9e-11
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 221 DRKENICLSILHKWHTLPIIGH-HLVPEHVETRSLFNPEKLGFEQGKIQMWVDIYPMENG 279
+ K N L H+ L ++ +PEHVETR L +P + EQGKIQ+WVDI+P G
Sbjct: 1831 ENKPNEHLGAKHQRLALHVLNQLEFIPEHVETRGLRSPMQPNIEQGKIQLWVDIFPKNEG 1890
Query: 280 VYIPPPVNIEPQKVEDYALKAII 302
V + P V+I ++ +Y L+ I+
Sbjct: 1891 V-LKPSVDITAREPTNYELRVIV 1912
Score = 49.2 bits (112), Expect = 5e-06
Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
Query: 102 FSEIKVYDAELEKQPEFSKFKDWCSTFKLYNG--NKTGIPEKDDQIFCGYLKAGIAIYKW 159
+ + VY ELEK EF +D ++F LY G K +++ Q G K IY
Sbjct: 1636 YDHLTVYPRELEKIEEFGGLEDMIASFSLYRGKAKKRDDDDEETQKVVGEFKGTFRIYPL 1695
Query: 160 PPPENTKSVSTGGVDLGKGYFSNYPSNEAAKVLVRVYL 197
P E DL + F+N P NE +VRVY+
Sbjct: 1696 PEAEGVDP------DLPETVFTNLPPNEPIDCVVRVYI 1727
>SB_50697| Best HMM Match : C2 (HMM E-Value=0.59)
Length = 437
Score = 44.4 bits (100), Expect = 1e-04
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Query: 102 FSEIKVYDAELEKQPEFSKFKDWCSTFKLYNGNKTGIPEKDDQIFCGYLKAGIAIYKWPP 161
+ I VY ELE+ EF FKD+ TF + G +++D + G K +Y P
Sbjct: 153 YQTITVYQTELERVEEFGGFKDFILTFPIRRGKAKSKDDQEDAV-VGEFKGAFRVYPLSP 211
Query: 162 PENTKSVSTGGVDLGKGYFSNYPSNEAAKVLVRVYL 197
E + L + ++ P +E LVRVY+
Sbjct: 212 DER-------NLALPETIYTALPPSEPTDCLVRVYV 240
>SB_2497| Best HMM Match : C2 (HMM E-Value=2.3e-06)
Length = 466
Score = 43.2 bits (97), Expect = 3e-04
Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 107 VYDAELEKQPEFSKFKDWCSTFKLYNGNKTGIPEKDDQIFCGYLKAGIAIYKWPPPENTK 166
VY ELE+Q EF F+D+ TF +Y G + DDQ G K +Y P
Sbjct: 1 VYSKELERQEEFKGFQDFVVTFPVYRGK---AEDYDDQASVGEFKGTFRVYPLP------ 51
Query: 167 SVSTGGVDLGKGYFSNYPSNEAAKVLVRVYL 197
S L N PS+ + +VRVY+
Sbjct: 52 --SDPAQPLPPKILRNLPSSGLVECIVRVYV 80
>SB_3201| Best HMM Match : C2 (HMM E-Value=0.0019)
Length = 278
Score = 36.3 bits (80), Expect = 0.034
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 39 GNFGLIGRSEITPAVDERQGYEYA-PNLEWFKIHNGMECTGQILMSVQLIQDN--DLPYT 95
G +GR + P V GY+ P L+W I G E G++L + +L D DLP++
Sbjct: 57 GKDDFLGRGSLVPIV-RLNGYQTPEPELKWIAIKRGQETGGEVLAACELFLDEGADLPFS 115
>SB_51331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 42
Score = 35.9 bits (79), Expect = 0.046
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 107 VYDAELEKQPEFSKFKDWCSTFKLYNGNKTGIPEKDDQIFCGYLK 151
VY ELE+Q EF F+D+ TF +Y G + DDQ G K
Sbjct: 1 VYSKELERQEEFKGFQDFVVTFPVYRGK---AEDYDDQASVGEFK 42
>SB_41789| Best HMM Match : Mucin (HMM E-Value=0.56)
Length = 683
Score = 33.5 bits (73), Expect = 0.24
Identities = 17/71 (23%), Positives = 33/71 (46%)
Query: 119 SKFKDWCSTFKLYNGNKTGIPEKDDQIFCGYLKAGIAIYKWPPPENTKSVSTGGVDLGKG 178
S+ D + ++ +G++ K+ Q G +K+G+ + + PP T +V+T DL
Sbjct: 307 SEENDEGTNARIMDGSRAASASKESQEVRGEVKSGVPLMREPPQSPTPAVTTPSADLAAS 366
Query: 179 YFSNYPSNEAA 189
F + A
Sbjct: 367 KFPTITNTPTA 377
>SB_41192| Best HMM Match : Mucin (HMM E-Value=0.56)
Length = 683
Score = 33.5 bits (73), Expect = 0.24
Identities = 17/71 (23%), Positives = 33/71 (46%)
Query: 119 SKFKDWCSTFKLYNGNKTGIPEKDDQIFCGYLKAGIAIYKWPPPENTKSVSTGGVDLGKG 178
S+ D + ++ +G++ K+ Q G +K+G+ + + PP T +V+T DL
Sbjct: 307 SEENDEGTNARIMDGSRAASASKESQEVRGEVKSGVPLMREPPQSPTPAVTTPSADLAAS 366
Query: 179 YFSNYPSNEAA 189
F + A
Sbjct: 367 KFPTITNTPTA 377
>SB_9453| Best HMM Match : Mucin (HMM E-Value=0.56)
Length = 642
Score = 33.5 bits (73), Expect = 0.24
Identities = 17/71 (23%), Positives = 33/71 (46%)
Query: 119 SKFKDWCSTFKLYNGNKTGIPEKDDQIFCGYLKAGIAIYKWPPPENTKSVSTGGVDLGKG 178
S+ D + ++ +G++ K+ Q G +K+G+ + + PP T +V+T DL
Sbjct: 307 SEENDEGTNARIMDGSRAASASKESQEVRGEVKSGVPLMREPPQSPTPAVTTPSADLAAS 366
Query: 179 YFSNYPSNEAA 189
F + A
Sbjct: 367 KFPTITNTPTA 377
>SB_36603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 62
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 5/34 (14%)
Query: 231 LHKWHTLPIIGHHLVPEHVETRSLFNPEKLGFEQ 264
LH +++P+ VPEHVETRSL+N + EQ
Sbjct: 34 LHVLNSMPV-----VPEHVETRSLYNSLQPNIEQ 62
>SB_39409| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 26 VKNYDMGIKTTSMGNFGLIGRSEITPAVDERQGYEYAPNLEWFKIHNGMECTGQILMSVQ 85
+K++ + + ++G +GR + P V AP L W+ + G E G+IL + +
Sbjct: 1 MKHFTDTLISANIGKDEFMGRCVVKPLVKLNGQGPPAPRLLWYDVERGDEYGGEILAAFE 60
Query: 86 L 86
L
Sbjct: 61 L 61
>SB_7857| Best HMM Match : GETHR (HMM E-Value=1.5)
Length = 205
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 212 HGSSSGSIADRKENICLSILHKWHTLPIIGH 242
H S GS+A+R++ +C S K T P + H
Sbjct: 135 HSSGLGSLAERRDRLCRSFATKARTSPPLSH 165
>SB_6197| Best HMM Match : C2 (HMM E-Value=3.7e-24)
Length = 569
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 38 MGNFGLIGRSEITPAVDERQGYEYAPNLEWFKIHNGMECTGQILMSVQLIQDN--DLPY 94
+G +GR TP V AP L W+ + G G+IL + +L D DLPY
Sbjct: 270 VGKDEYMGRCVATPEVKLHGQGPPAPRLLWYPVTKGDMEGGEILAAFELFLDEGADLPY 328
>SB_25082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 585
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 277 ENGVYIPPPVNIEPQKVEDYALKAIIRQVKLFR 309
E GV I PP N P + +++AII+Q+K R
Sbjct: 441 EGGVQISPPSNSLPYYLTQLSVEAIIKQLKSSR 473
>SB_16343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 449
Score = 29.1 bits (62), Expect = 5.2
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 10/66 (15%)
Query: 234 WHTLPIIGHHLVPEHVETR-SLFNPEKLGFEQGKIQM-WVDIYPM-------ENGVYIPP 284
W L GH L +H E S+ P G++Q KI++ W D+ + E+G PP
Sbjct: 193 WVALHEFGHSLGIDHSEVHGSIMFPWYQGYKQ-KIKLTWDDVMAIQGIYGKNEDGQTKPP 251
Query: 285 PVNIEP 290
PV ++P
Sbjct: 252 PVTVKP 257
>SB_9229| Best HMM Match : LRR_1 (HMM E-Value=0.038)
Length = 92
Score = 28.7 bits (61), Expect = 6.9
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 55 ERQGYEYAPNLEWFKI-HNGMECTGQILMSVQLIQDNDLPYTEDSTRFFSEIKVYDAELE 113
E +G E+ +LE I HNG+E +I L DN L + ED K++ LE
Sbjct: 6 ELKGLEHLDSLEELYISHNGIE---EIKGLESLFNDNQLEHWEDLDELAKCPKLHTVYLE 62
Query: 114 KQP 116
+ P
Sbjct: 63 RNP 65
>SB_17627| Best HMM Match : F_actin_cap_B (HMM E-Value=0)
Length = 480
Score = 28.7 bits (61), Expect = 6.9
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 55 ERQGYEYAPNLEWFKI-HNGMECTGQILMSVQLIQDNDLPYTEDSTRFFSEIKVYDAELE 113
E +G E+ +LE I HNG+E +I L DN L + ED K++ LE
Sbjct: 394 ELKGLEHLESLEELYISHNGIE---EIKGLESLFNDNQLKHWEDLDELAKCPKLHTVYLE 450
Query: 114 KQP 116
+ P
Sbjct: 451 RNP 453
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.139 0.433
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,140,642
Number of Sequences: 59808
Number of extensions: 538158
Number of successful extensions: 969
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 944
Number of HSP's gapped (non-prelim): 26
length of query: 328
length of database: 16,821,457
effective HSP length: 82
effective length of query: 246
effective length of database: 11,917,201
effective search space: 2931631446
effective search space used: 2931631446
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)
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