Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002128-TA|BGIBMGA002128-PA|IPR000008|C2
calcium-dependent membrane targeting, IPR008973|C2
calcium/lipid-binding region, CaLB
(205 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1102 + 24319569-24319917,24320120-24321496,24321819-243220... 38 0.008
07_01_0061 - 451093-451377,451501-451596,451714-451824 37 0.013
02_05_0566 - 30017031-30017309,30018077-30018172,30018261-300183... 36 0.031
06_03_0723 + 23875008-23875204,23875311-23875576,23877166-238772... 32 0.38
01_01_0562 + 4126368-4128196,4128517-4128715,4128827-4128886,412... 31 0.50
07_01_0921 + 7753744-7753821,7753921-7754856,7755285-7755377,775... 30 1.5
06_03_0712 + 23803597-23803945,23804118-23805479,23805743-238058... 30 1.5
02_01_0753 - 5586705-5586766,5587864-5588056,5588154-5588423,558... 30 1.5
04_04_0466 + 25433678-25434007,25434118-25434176,25434345-254344... 29 2.7
01_01_0186 + 1598046-1598234,1599215-1599277,1599359-1599448,159... 29 2.7
06_02_0041 + 10889741-10890092,10890161-10890235,10891139-108923... 29 3.5
03_05_0488 - 24847076-24847220,24847823-24847872,24848139-248482... 29 3.5
02_02_0710 + 13173074-13173187,13173495-13173590,13174624-13174911 29 3.5
01_07_0189 + 41875088-41875149,41875322-41875392,41875809-418759... 29 3.5
07_03_0394 - 17633753-17636788 28 4.6
02_01_0739 + 5505630-5505654,5505965-5506049,5506444-5506519,550... 28 4.6
12_02_1128 - 26341118-26341204,26341302-26341441,26341567-263416... 28 6.1
>08_02_1102 +
24319569-24319917,24320120-24321496,24321819-24322001,
24322147-24322460,24322515-24322631,24323057-24323313,
24323504-24323684,24323802-24324074,24324535-24324729
Length = 1081
Score = 37.5 bits (83), Expect = 0.008
Identities = 27/119 (22%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Query: 33 IQILVTVLEASKLHWNNPRAATS-YVLLSIGKKKYRTTIRRNMLEPYYGENFTFDLFMSI 91
+++ V V+EA L + + YV L +GK++++T + + L P + + F+F S+
Sbjct: 1 MRLNVRVIEARNLRAMDSNGFSDPYVKLQLGKQRFKTKVVKKNLNPAWDQEFSF----SV 56
Query: 92 REMQRTILWLAVMEPRCCAPPRSVGEAGIELATIWALPHHRAFHKWAQLDSRNDPSEAV 150
++ R +L L V + +G+ + L + A ++ +W QL + +A+
Sbjct: 57 GDV-RDVLKLYVYDEDMIGIDDFLGQVKVPLEDVLAADNYSLGARWFQLLPKGKTEKAI 114
>07_01_0061 - 451093-451377,451501-451596,451714-451824
Length = 163
Score = 36.7 bits (81), Expect = 0.013
Identities = 20/86 (23%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 37 VTVLEASKLHWNNPRAATSYVLLSIGKKKYRTTIRRNMLEPYYGENFTFDLFMSIREMQR 96
+ V+ L + + R + YV+L +GK+K +T++++ + P + E T + I ++
Sbjct: 10 IRVVRGINLAYRDTRGSDPYVVLRLGKQKVKTSVKKKSVNPIWHEELTLSIMNPIAPIK- 68
Query: 97 TILWLAVMEPRCCAPPRSVGEAGIEL 122
L V + + +G+A I+L
Sbjct: 69 ----LGVFDKDTFSRDDPMGDAEIDL 90
>02_05_0566 -
30017031-30017309,30018077-30018172,30018261-30018377,
30018538-30018667,30018866-30019029,30019480-30019485
Length = 263
Score = 35.5 bits (78), Expect = 0.031
Identities = 17/72 (23%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 11 KPVAIRTGPVAGDKLPEDSSRYI-QILVTVLEASKLHWNNPRAATSYVLLSIGKKKYRTT 69
K V +G + +D+ ++ ++ +TV+ +L + + YV+L++G++K +TT
Sbjct: 85 KSVTSSISSASGKHVADDTREFVGELNITVVRGIQLAVRDMLTSDPYVVLTLGEQKAQTT 144
Query: 70 IRRNMLEPYYGE 81
++ + L P + E
Sbjct: 145 VKPSDLNPVWNE 156
>06_03_0723 + 23875008-23875204,23875311-23875576,23877166-23877274,
23877577-23878212,23878328-23878573,23878669-23878834,
23878863-23879076,23879580-23880097,23880617-23880683,
23882131-23882215,23882292-23882367,23882593-23882756,
23883088-23883217,23883314-23883430,23883505-23883600,
23883732-23884009,23886571-23886794,23886935-23887011,
23887103-23887145,23887231-23887288,23888371-23888410,
23888891-23889418
Length = 1444
Score = 31.9 bits (69), Expect = 0.38
Identities = 15/53 (28%), Positives = 31/53 (58%)
Query: 35 ILVTVLEASKLHWNNPRAATSYVLLSIGKKKYRTTIRRNMLEPYYGENFTFDL 87
I V V+ +KL + ++ YV+L++G++K +T + ++ L P + E T +
Sbjct: 968 IKVKVIRGTKLAVRDILSSDPYVVLTLGQQKAKTKVIKSNLNPVWNEVLTLSV 1020
>01_01_0562 +
4126368-4128196,4128517-4128715,4128827-4128886,
4129129-4129233,4129987-4130127,4130223-4130285,
4130925-4131152,4131250-4131333,4132000-4132157,
4132252-4132777,4133641-4133700,4133904-4134026,
4134906-4135181,4135282-4135347,4135500-4135631,
4135977-4136798,4137026-4137306,4137564-4137796,
4138022-4138260,4138367-4138558,4138808-4139080,
4139186-4139332
Length = 2078
Score = 31.5 bits (68), Expect = 0.50
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 14/107 (13%)
Query: 100 WLAVMEPRCCAPPRSVGEAGIELAT-IWALPHHRAFHKWAQLDSRNDPSEAVVGFLKVDI 158
WL + P +P R GE GI+ T L +A +W + + A +G+
Sbjct: 226 WLGLPAPSEGSPKRHSGEEGIDYRTKTRRLAREKAAEQWNEERDKAAREAAEMGY----- 280
Query: 159 SIIFRGDSQILPSVDNYEKVEEAGTIERA-NNPRLCLSPDPNGERKD 204
I I PS+D E +E+ G ++ ++P LC PD RKD
Sbjct: 281 --IVPSAQSISPSID--EMMEDDGPVDTGKSSPHLC--PD-EMHRKD 320
>07_01_0921 +
7753744-7753821,7753921-7754856,7755285-7755377,
7755462-7755815
Length = 486
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 21 AGDKLPEDSSRYIQILVTVLEASKLHWNNPRAATSYVLLSIGKKKYRTTIRRNML 75
+GD +P + Y+Q ++ + E ++ +W + Y LSI +K R I R +L
Sbjct: 200 SGDGVP---AMYLQFMMNLSEQTEYNWGAAALSMLYRQLSIASEKERAEISRPLL 251
>06_03_0712 +
23803597-23803945,23804118-23805479,23805743-23805811,
23806050-23806330,23806817-23807076,23807521-23807689,
23807796-23808068,23808251-23808499
Length = 1003
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 56 YVLLSIGKKKYRTTIRRNMLEPYYGENFTF 85
+V L +GK++ +T + R L P + E F+F
Sbjct: 25 FVKLQLGKRRAKTAVARRTLAPAWDEEFSF 54
>02_01_0753 -
5586705-5586766,5587864-5588056,5588154-5588423,
5588522-5588687,5589049-5589209,5590065-5590181,
5590269-5590549,5590750-5590833,5591100-5592542,
5593167-5593575
Length = 1061
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 56 YVLLSIGKKKYRTTIRRNMLEPYYGENFTFDLFMSIREMQRTIL 99
YV L +G+++ +TT+ + L P + E F F + + E+ ++L
Sbjct: 45 YVRLQMGRRRAKTTVVKRCLSPLWDEEFGFAVGDAEEELVVSVL 88
>04_04_0466 +
25433678-25434007,25434118-25434176,25434345-25434426,
25435024-25435122,25435750-25435831,25436759-25436823,
25437241-25438308,25438369-25438446,25438550-25438596,
25438734-25438779,25438871-25438950,25439050-25439166,
25439842-25439923,25440156-25440281,25440415-25440489,
25440743-25440868,25441542-25441646
Length = 888
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 71 RRNMLEPYYGENFTFDLFMSIREMQRTILWLAVMEPRCCAPPRSVGEAGIELATI 125
+R EP + E FTF++ +S + +L +A + P + +G AG+ L ++
Sbjct: 165 QRRTKEPTWNEEFTFNISLS----RENLLQVAAWDANLVTPHKRMGNAGLCLESL 215
>01_01_0186 +
1598046-1598234,1599215-1599277,1599359-1599448,
1599968-1600093,1600583-1600726,1600845-1601255,
1601283-1601364,1601403-1601491,1602250-1602471,
1602552-1602827,1603116-1603253,1603772-1604077,
1604203-1604421
Length = 784
Score = 29.1 bits (62), Expect = 2.7
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 11/107 (10%)
Query: 35 ILVTVLEASKLHWNNPRAATS-YVLLSIGKKKYRTTIRRNMLEPYYGENFTFDLFMSIRE 93
I + ++EA L + R + YV + G KK RT + L P + + F F E
Sbjct: 575 IELVIIEARDLIAADLRGTSDPYVRVHYGSKKKRTKVVYKTLSPDWNQTFEFP------E 628
Query: 94 MQRTILWLAVMEPRCCAPPRSVGEAGIELATIWALPHHRAFHKWAQL 140
++ L V + P S+G+ +E + LP ++ KW L
Sbjct: 629 TGEPLI-LHVKDHNAVLPTASIGQCTVEYS---MLPPNQPAVKWIPL 671
>06_02_0041 +
10889741-10890092,10890161-10890235,10891139-10892341,
10892970-10893253,10893343-10893459,10894126-10894388,
10894557-10894725,10894838-10895110,10895674-10895718,
10896472-10896591,10896926-10896987,10897296-10897318,
10897911-10898128
Length = 1067
Score = 28.7 bits (61), Expect = 3.5
Identities = 25/118 (21%), Positives = 55/118 (46%), Gaps = 7/118 (5%)
Query: 33 IQILVTVLEASKLHWNNPRAATS--YVLLSIGKKKYRTTIRRNMLEPYYGENFTFDLFMS 90
+++LV V EA L + S Y L +G+++ +T + + L P + E F F
Sbjct: 1 MRLLVQVSEARNLPAIDGGGGLSDPYAKLQLGRQRGKTRVAKRTLSPTWDEEFAF----R 56
Query: 91 IREMQRTILWLAVMEPRCCAPPRSVGEAGIELATIWALPHHRAFHKWAQLDSRNDPSE 148
+ +++ ++ + V E R + +G+ + L+ + + +W QL ++ S+
Sbjct: 57 VVDLKDELVVVVVDEDRYFSDD-FLGQVRVPLSAVLDADNRSLGTQWYQLLPKSKKSK 113
>03_05_0488 -
24847076-24847220,24847823-24847872,24848139-24848278,
24848358-24848493,24848584-24848683,24848837-24848949,
24849034-24849132,24849227-24849311,24849799-24850037,
24850202-24850372,24850544-24850784,24850899-24851172,
24851481-24851660,24852170-24852251,24852336-24852437,
24853315-24853384,24853725-24853824,24853931-24854025,
24854105-24854184,24854361-24854439,24854603-24854663,
24855570-24855984
Length = 1018
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 104 MEPRCCAPPRSVGEAGIELATIWALPH--HRAFHKWAQLDSRNDP 146
+E PP S G AGI LA A H +KW++L + +P
Sbjct: 122 LEGNSATPPSSAGSAGIRLAGATADVHCYDVLSNKWSRLTPQGEP 166
>02_02_0710 +
13173074-13173187,13173495-13173590,13174624-13174911
Length = 165
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/53 (22%), Positives = 27/53 (50%)
Query: 35 ILVTVLEASKLHWNNPRAATSYVLLSIGKKKYRTTIRRNMLEPYYGENFTFDL 87
+ V V+ L + R++ YV++ +GK+K +T + + P + + T +
Sbjct: 9 VKVRVVRGVNLAVRDLRSSDPYVIVRMGKQKLKTRVIKKTTNPEWNDELTLSI 61
>01_07_0189 +
41875088-41875149,41875322-41875392,41875809-41875902,
41876285-41876360,41877130-41877293,41877428-41877605,
41877687-41877809,41877895-41877990,41878091-41878372
Length = 381
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/53 (22%), Positives = 27/53 (50%)
Query: 35 ILVTVLEASKLHWNNPRAATSYVLLSIGKKKYRTTIRRNMLEPYYGENFTFDL 87
I V V+ + L + ++ YV+L++G + +T + ++ L P + E +
Sbjct: 227 IKVNVIRGTNLAVRDMMSSDPYVILNLGHQSMKTKVIKSSLNPVWNERILLSI 279
>07_03_0394 - 17633753-17636788
Length = 1011
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/55 (25%), Positives = 25/55 (45%)
Query: 33 IQILVTVLEASKLHWNNPRAATSYVLLSIGKKKYRTTIRRNMLEPYYGENFTFDL 87
+++ V V A L YV + +K+RT I+ + P + E F F++
Sbjct: 5 LKLGVEVTSAHDLLPKEQGTCNPYVEIEFDDQKFRTAIKERDINPVWNEQFYFNI 59
>02_01_0739 +
5505630-5505654,5505965-5506049,5506444-5506519,
5506694-5506857,5506878-5506935,5507283-5507399,
5507543-5507638,5507905-5508186
Length = 300
Score = 28.3 bits (60), Expect = 4.6
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 32 YIQIL-VTVLEASKLHWNNPRAATSYVLLSIGKKKYRTTIRRNMLEPYYGENFTFDLFMS 90
+I IL V V + L + ++ YV+L++G++K +T++ + L P + E +L +S
Sbjct: 142 FIGILNVKVKGGTNLAIRDMSSSDPYVVLTLGQQKAQTSVIKANLNPVWNE----ELKLS 197
Query: 91 IREMQRTILWLAVMEPRCCAPPRSVGEAGIEL 122
+ + Q L L V + + +GEA I+L
Sbjct: 198 VPQ-QYGPLKLQVFDHDMLSKDDLMGEAEIDL 228
>12_02_1128 -
26341118-26341204,26341302-26341441,26341567-26341663,
26341755-26341830,26341919-26342118,26342199-26342297,
26342395-26342479,26342786-26343024,26343233-26343403,
26343605-26343848,26343980-26344253,26344755-26344934,
26345342-26345423,26346209-26346278,26346802-26346901,
26347003-26347097,26347181-26347317,26347342-26347420,
26347591-26347651,26348580-26349009
Length = 981
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 104 MEPRCCAPPRSVGEAGIELATIWALPH--HRAFHKWAQLDSRNDP 146
+E PP S G AGI LA A H + +KW++L +P
Sbjct: 127 LEGNSATPPSSAGSAGIRLAGATADVHCYDVSSNKWSRLTPVGEP 171
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.136 0.414
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,533,158
Number of Sequences: 37544
Number of extensions: 255090
Number of successful extensions: 532
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 519
Number of HSP's gapped (non-prelim): 21
length of query: 205
length of database: 14,793,348
effective HSP length: 79
effective length of query: 126
effective length of database: 11,827,372
effective search space: 1490248872
effective search space used: 1490248872
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 58 (27.5 bits)
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