Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002128-TA|BGIBMGA002128-PA|IPR000008|C2
calcium-dependent membrane targeting, IPR008973|C2
calcium/lipid-binding region, CaLB
(205 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56890| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_22897| Best HMM Match : C2 (HMM E-Value=4.1e-11) 41 6e-04
SB_19231| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_19229| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_30705| Best HMM Match : C2 (HMM E-Value=3.7e-07) 37 0.010
SB_3670| Best HMM Match : C2 (HMM E-Value=3.7e-07) 37 0.010
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 36 0.031
SB_3985| Best HMM Match : C2 (HMM E-Value=0) 35 0.055
SB_49137| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.072
SB_3986| Best HMM Match : C2 (HMM E-Value=2.9e-31) 34 0.096
SB_41604| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_45184| Best HMM Match : C2 (HMM E-Value=1.1e-22) 33 0.22
SB_43325| Best HMM Match : C2 (HMM E-Value=1.1e-22) 33 0.22
SB_20559| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37) 33 0.22
SB_27807| Best HMM Match : C2 (HMM E-Value=0) 33 0.22
SB_27194| Best HMM Match : C2 (HMM E-Value=1e-22) 29 2.7
SB_2343| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_1713| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_10386| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_33107| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_45192| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
>SB_56890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1665
Score = 51.6 bits (118), Expect = 4e-07
Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Query: 59 LSIGKKKYRTTIRRNMLEPYYGENFTFDLFMSIREMQRTILWLAVMEPR-CCAPPRSVGE 117
+S+G +K TI+ P+Y E F FD M + I+ R + +G
Sbjct: 230 VSVGNQKKSATIKEQTNCPFYDEFFVFDFKMPPMVLSDKIVMFQFYTGRNLVSQGALIGS 289
Query: 118 AGIELATIWALPHHRAFHKWAQLDSRNDPSEA----VVGFLKVDISIIFRGD-SQILPSV 172
+++ T++A P HR +WA L + A V G+ +VDI+++ +GD ++ P +
Sbjct: 290 FKLDVGTVYAQPDHRFCRRWAVLTDPEETLGASGAGVKGYARVDITVLGKGDPAKEQPGI 349
Query: 173 -DNYEKVE 179
DN + +E
Sbjct: 350 KDNDDDIE 357
>SB_22897| Best HMM Match : C2 (HMM E-Value=4.1e-11)
Length = 314
Score = 41.1 bits (92), Expect = 6e-04
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 18/159 (11%)
Query: 26 PEDSSRYIQILVTVLEASKLHWNNPRAATS----YVLLSIGKKKYRTTIRRNMLEPYYGE 81
P+ + Y+ + T + W+ + T YV + +GK K RT+ + L P + E
Sbjct: 48 PKTHAGYLNNVKTQIWMGTSKWSAKISITGTSDPYVTVQVGKTKKRTSTIPHELNPEWNE 107
Query: 82 NFTFDLFMSIREMQRTILWLAVMEPRCCAPPRSVGEAGIELATIWALPHHRAFHKWAQLD 141
F D I+ R L + E P +G+ IE+ T+ W L+
Sbjct: 108 TFLLDEDDDIKSRVRQKL---IRE-----PDDFLGQTIIEVRTL-----SGEMDVWYNLE 154
Query: 142 SRNDPSEAVVGFLKVDISIIFRGDSQILPSVDNYEKVEE 180
R D S AV G +++ ISI +G+ +++P Y + E
Sbjct: 155 KRTDRS-AVSGAIRLRISIEIKGEEKVVPYHTQYTCLHE 192
>SB_19231| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 37.9 bits (84), Expect = 0.006
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Query: 47 WNNPRAATSYVLLSIGKK-----KYRTTIRRNMLEPYYGENFTFDLFMSIREMQRTILWL 101
W+N A SYV L + K +T+I R EPYY E F F + M ++ IL L
Sbjct: 486 WDN--AVDSYVQLKLDPDPGNVYKGKTSISRKTTEPYYNETFQFSIEM--EKLADAILSL 541
Query: 102 AVMEPRCCAPPRSVGEAGIELATI 125
VME + +G+ +EL +
Sbjct: 542 LVMEVDRYSRHHVIGQIDLELGDV 565
>SB_19229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/78 (26%), Positives = 44/78 (56%), Gaps = 8/78 (10%)
Query: 34 QILVTVLEASKLH------WNNPRAATSYVLLSIGKKKYRTTIRRNMLEPYYGENFTFDL 87
++ +T++EA L +++P + V KK +TT+++ L PYY E FTF
Sbjct: 217 KLQITIVEAKSLKSMDLTGYSDPYVKIALVQEGRKIKKKKTTVKKRTLNPYYNETFTFT- 275
Query: 88 FMSIREMQRTILWLAVME 105
++ ++++T L ++V++
Sbjct: 276 -VAFEKIEQTSLIISVLD 292
>SB_30705| Best HMM Match : C2 (HMM E-Value=3.7e-07)
Length = 278
Score = 37.1 bits (82), Expect = 0.010
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 57 VLLSIGKKKYRTTIRRNMLEPYYGENFTFDLFMSIREMQRTILWLAVMEPRCCAPPRSVG 116
VLL K++++T RR P + E F FD + ++ R + L + A + VG
Sbjct: 189 VLLPAKKQRFKTKHRRTP-HPKFRETFVFDRLVK-EDLYRMAVRLRLYTQSGVAKEKLVG 246
Query: 117 EAGIELATIWALPHHRAFHKWAQLDSRNDPSE 148
E ++LA I P ++ + W L +P++
Sbjct: 247 EINLQLADIAQAPGYK-LNAWRDLRKARNPAD 277
>SB_3670| Best HMM Match : C2 (HMM E-Value=3.7e-07)
Length = 188
Score = 37.1 bits (82), Expect = 0.010
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 57 VLLSIGKKKYRTTIRRNMLEPYYGENFTFDLFMSIREMQRTILWLAVMEPRCCAPPRSVG 116
VLL K++++T RR P + E F FD + ++ R + L + A + VG
Sbjct: 99 VLLPAKKQRFKTKHRRTP-HPKFRETFVFDRLVK-EDLYRMAVRLRLYTQSGVAKEKLVG 156
Query: 117 EAGIELATIWALPHHRAFHKWAQLDSRNDPSE 148
E ++LA I P ++ + W L +P++
Sbjct: 157 EINLQLADIAQAPGYK-LNAWRDLRKARNPAD 187
>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
Length = 553
Score = 35.5 bits (78), Expect = 0.031
Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 7/61 (11%)
Query: 34 QILVTVLEASKL-HWNNPRAATSYVLLSI----GKK--KYRTTIRRNMLEPYYGENFTFD 86
++ V VL+AS L + RA SYV +++ GK+ K +TTIR++M +P Y E+F ++
Sbjct: 64 RLTVEVLKASNLRNVAMQRAPDSYVKVTLVSSSGKQVAKSKTTIRKSMADPEYNESFVYE 123
Query: 87 L 87
+
Sbjct: 124 I 124
>SB_3985| Best HMM Match : C2 (HMM E-Value=0)
Length = 835
Score = 34.7 bits (76), Expect = 0.055
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 56 YVLLSIGKKKYRTTIRRNMLEPYYGENFTFDLFMSIREMQRTILWL 101
Y +L IG +K+RT +++N L P + E TF+ F+ E Q ++L
Sbjct: 391 YAILEIGAQKFRTKVKKNDLNPTWNE--TFEAFVDNSEGQDIDMFL 434
>SB_49137| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 34.3 bits (75), Expect = 0.072
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 63 KKKYRTTIRRNMLEPYYGENFTFDLFMSIREMQRTILWLAVMEPRCCAPPRSVGEAGIEL 122
K+ + + + R L+P++ E + FD+ S E+Q L VME C + R +GE + L
Sbjct: 238 KQLFISKVIRQTLQPFFNETYEFDI--SYDELQSQKLLFQVMEFDCLSRHRILGEVRVCL 295
Query: 123 ATI 125
+ +
Sbjct: 296 SDL 298
>SB_3986| Best HMM Match : C2 (HMM E-Value=2.9e-31)
Length = 778
Score = 33.9 bits (74), Expect = 0.096
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 56 YVLLSIGKKKYRTTIRRNMLEPYYGENFTFDLFMSIREMQRTILWLAVMEPRCCAPPRSV 115
Y ++ +G +KYRT +++ +P + E TF+ F+ E Q L+ V + +
Sbjct: 303 YCIVEVGAQKYRTKTKKSNCDPVWKE--TFEAFIDNTEGQE--LFCKVYDEDIAGKDTEI 358
Query: 116 GEAGIELAT 124
GE +++A+
Sbjct: 359 GEVDVQVAS 367
>SB_41604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 406
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/82 (21%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 34 QILVTVLEASKLHWNNPRAATS-YVLLSIGKKKYRTTIRRNMLEPYYGENFTFDLFMSIR 92
+++VT++E L ++P + Y +S+G ++++T + L P + TF +++
Sbjct: 268 KLVVTIVEGVDLKSSDPSGMSDPYCEVSMGSQEHKTRVCPQTLNPKWNSTMTF----TVK 323
Query: 93 EMQRTILWLAVMEPRCCAPPRS 114
+M++ +L + V + +P S
Sbjct: 324 DMEQDVLCITVFDRDFFSPNES 345
>SB_45184| Best HMM Match : C2 (HMM E-Value=1.1e-22)
Length = 344
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/73 (21%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 34 QILVTVLEASKLHWNNPRAATS-YVLLSIGKKKYRTTIRRNMLEPYYGENFTFDLFMSIR 92
+++VT++E L ++P + Y +S+G ++++T + L P + TF +++
Sbjct: 268 KLVVTIVEGVDLKSSDPSGMSDPYCEVSMGSQEHKTRVCPQTLNPKWNSTMTF----TVK 323
Query: 93 EMQRTILWLAVME 105
+M++ +L + V +
Sbjct: 324 DMEQDVLCITVFD 336
>SB_43325| Best HMM Match : C2 (HMM E-Value=1.1e-22)
Length = 87
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/73 (21%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 34 QILVTVLEASKLHWNNPRAATS-YVLLSIGKKKYRTTIRRNMLEPYYGENFTFDLFMSIR 92
+++VT++E L ++P + Y +S+G ++++T + L P + TF +++
Sbjct: 11 KLVVTIVEGVDLKSSDPSGMSDPYCEVSMGSQEHKTRVCPQTLNPKWNSTMTF----TVK 66
Query: 93 EMQRTILWLAVME 105
+M++ +L + V +
Sbjct: 67 DMEQDVLCITVFD 79
>SB_20559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/73 (21%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 34 QILVTVLEASKLHWNNPRAATS-YVLLSIGKKKYRTTIRRNMLEPYYGENFTFDLFMSIR 92
+++VT++E L ++P + Y +S+G ++++T + L P + TF +++
Sbjct: 224 KLVVTIVEGVDLKSSDPSGMSDPYCEVSMGSQEHKTRVCPQTLNPKWNSTMTF----TVK 279
Query: 93 EMQRTILWLAVME 105
+M++ +L + V +
Sbjct: 280 DMEQDVLCITVFD 292
>SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37)
Length = 1052
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/73 (21%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 34 QILVTVLEASKLHWNNPRAATS-YVLLSIGKKKYRTTIRRNMLEPYYGENFTFDLFMSIR 92
+++VT++E L ++P + Y +S+G ++++T + L P + TF +++
Sbjct: 933 KLVVTIVEGVDLKSSDPSGMSDPYCEVSMGSQEHKTRVCPQTLNPKWNSTMTF----TVK 988
Query: 93 EMQRTILWLAVME 105
+M++ +L + V +
Sbjct: 989 DMEQDVLCITVFD 1001
>SB_27807| Best HMM Match : C2 (HMM E-Value=0)
Length = 405
Score = 32.7 bits (71), Expect = 0.22
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 57 VLLSIGKKKYRTTIRRNMLEPYYGENFTFDLFMSIREMQRTILWLAVMEPRCCAPPRSVG 116
+LL K K T ++R L P + E FTF+ F + M +T L++ V++ + +G
Sbjct: 167 MLLPDKKHKLETRVKRKNLNPVWNEVFTFEGFPHNKLMGKT-LYMQVLDYDRFSRNDPIG 225
Query: 117 EAGIELATI 125
E I L I
Sbjct: 226 EVEIPLENI 234
Score = 30.7 bits (66), Expect = 0.89
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Query: 34 QILVTVLEASKLHWNNPRAATS-YVLLSIGKK-----KYRTTIRRNMLEPYYGENFTFDL 87
+I+V V++A+KL + ++ YV + I K K +TTI+R +P + E+F FD+
Sbjct: 272 RIIVVVMKANKLKAMDLTGSSDPYVKMYIMHKDRRLDKKKTTIKRRTRDPVWNESFIFDV 331
>SB_27194| Best HMM Match : C2 (HMM E-Value=1e-22)
Length = 139
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 61 IGKKKYRTTIRRNMLEPYYGENFTFDLFM-SIREMQRTILWLAVMEPRCC 109
+GKKK T +++ + P + + FTFDL S+ +M + V + C
Sbjct: 52 VGKKK--TRVKKKTVNPKFAQTFTFDLAADSVLDMMTMTFTVMVQDASGC 99
>SB_2343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 63 KKKYRTTIRRNMLEPYYGENFTFDL 87
K K RT IR+ L P + E F +D+
Sbjct: 56 KSKRRTNIRKKTLNPEFNEEFVYDI 80
>SB_1713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 128 LPHHRAFHKWAQLDSRNDPSEAVVGFLKVDISIIFRGDS 166
+P ++ HKW +L+ D +E V + +S+I+ DS
Sbjct: 72 IPRYQPRHKWIRLEKNLDANEFVKDCATLPLSVIYGLDS 110
>SB_10386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 65 KYRTTIRRNMLEPYYGENFTF 85
K RTT RR+M++P Y E F F
Sbjct: 535 KGRTTPRRHMIDPEYNEMFLF 555
>SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2839
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 91 IREMQRTIL--WLAVMEPRCC---APPRSVGEAGIELATIWALPHHRAFHKWAQLDSRND 145
++E +R++L W A E + AP RS+ +GI T W+L +A + +
Sbjct: 1254 LKEKRRSLLLMWEAKAESKGLMSHAPTRSLKSSGIPSTTPWSLSPRKALKVFYFSKLGQN 1313
Query: 146 PSEAVVGFLKVDI 158
SE +V + +D+
Sbjct: 1314 RSENIVDYRTMDV 1326
>SB_33107| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1079
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Query: 108 CCAPPRSVGEAGIELATIWALPHHRAFHKWAQLDSRNDPSEAVVGFLKVDISIIFRGDS 166
CC PR G AG + LP F + L +N S +L+ D+SI+ G+S
Sbjct: 588 CCISPRVKGRAGHKEKVFSVLP-STCFRICSDLTKKNCHS-----YLRSDVSIVCEGES 640
>SB_45192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 34 QILVTVLEASKLHWNNPRAATSYVLLSI---GK--KKYRTTIRRNMLEPYYGENFTFDL 87
++ V +++A L N + YV +S+ GK KK +T+ +++ L P + E +FD+
Sbjct: 516 RLTVVLIKARNLPAVNIKGTDPYVKVSLLINGKRVKKKKTSTKKSDLHPVFNEAVSFDI 574
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.136 0.414
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,378,304
Number of Sequences: 59808
Number of extensions: 284533
Number of successful extensions: 527
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 508
Number of HSP's gapped (non-prelim): 26
length of query: 205
length of database: 16,821,457
effective HSP length: 79
effective length of query: 126
effective length of database: 12,096,625
effective search space: 1524174750
effective search space used: 1524174750
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 58 (27.5 bits)
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