Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002127-TA|BGIBMGA002127-PA|IPR001356|Homeobox,
IPR009057|Homeodomain-like
(137 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0034 + 20370672-20371109,20371120-20371515 50 9e-07
04_04_0667 + 27097741-27098085,27098203-27098547 45 2e-05
08_01_0246 - 2028701-2029060,2029149-2030606,2030729-2031160 45 2e-05
03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657 44 3e-05
04_04_1231 - 31934745-31935125,31935230-31935325,31936215-319362... 44 4e-05
01_06_0212 + 27575406-27575604,27575723-27576241,27576371-27576387 43 8e-05
10_07_0134 + 13289641-13290216,13290435-13290914 43 1e-04
08_02_0052 + 11699468-11699700,11699799-11699916,11699991-117006... 43 1e-04
04_04_0841 - 28574497-28574883,28575815-28576188,28576262-285764... 43 1e-04
02_05_0134 + 26161904-26162776 42 1e-04
09_04_0468 + 17848144-17848174,17849032-17849378,17849505-17849921 42 2e-04
08_01_0574 + 5103466-5103534,5104526-5104806,5104959-5105127 42 2e-04
10_08_1025 - 22391267-22391767,22392641-22392736,22392838-223931... 41 3e-04
01_06_1818 - 40093327-40093384,40093501-40093580,40093661-400939... 41 4e-04
08_02_1031 - 23796755-23797171,23797243-23797595,23797676-23797715 40 7e-04
03_01_0630 + 4635297-4636220 40 0.001
02_05_0618 + 30400338-30400452,30400553-30400692,30400805-304010... 39 0.001
02_05_0286 - 27506925-27507278,27508439-27508812,27509041-275092... 39 0.002
01_06_0040 - 25874308-25874611,25875743-25875822,25876764-258769... 38 0.002
09_06_0020 - 20267190-20267612,20269086-20269495,20269573-202697... 38 0.004
08_02_0670 - 19877091-19877618,19880033-19880436,19880505-19880622 38 0.004
09_03_0144 - 12728697-12729238,12729312-12729432 37 0.005
03_02_0033 - 5148513-5148806,5148928-5149271,5149391-5149472 37 0.005
10_06_0180 + 11526139-11526172,11526365-11527218 37 0.007
01_06_0968 + 33466574-33466607,33467087-33467115,33467438-334675... 37 0.007
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477... 36 0.012
06_01_0741 - 5510159-5510581,5510862-5511124,5511223-5511400,551... 34 0.047
02_01_0380 + 2757691-2758080,2758389-2758712 34 0.047
06_01_0292 + 2136637-2137050,2137162-2137671 33 0.062
04_04_0710 - 27453135-27453480,27453647-27453726,27453893-274541... 33 0.11
03_01_0167 + 1374578-1375243,1375895-1376277,1377947-1378007,137... 33 0.11
06_01_0061 + 527417-527856,527957-528017,528113-528685 32 0.14
07_03_1043 + 23506148-23506226,23506344-23506693,23506782-23507075 32 0.19
05_05_0075 + 22209322-22210041,22210323-22210391,22210775-222111... 31 0.25
11_01_0371 - 2821224-2822036,2822162-2822222,2823755-2824158 31 0.33
10_08_0929 + 21633179-21633377,21633466-21633809,21633905-21634297 31 0.33
07_03_0126 - 13797395-13797451,13797590-13797707,13797802-13798004 31 0.33
05_07_0112 - 27755604-27756449,27756624-27756887,27757428-277575... 31 0.33
06_01_0878 + 6735266-6735340,6735946-6736041,6738610-6738720,673... 31 0.43
01_06_1342 - 36438869-36439459,36439567-36439627,36440751-364411... 31 0.43
03_01_0456 - 3495537-3496205,3496304-3496364,3496447-3496829,349... 30 0.57
06_01_0290 + 2122758-2123015,2123128-2123544 30 0.76
02_04_0278 - 21507288-21507726,21507893-21507972,21508587-215088... 30 0.76
09_04_0318 - 16620177-16620582,16620686-16620765,16620873-166212... 29 1.0
03_02_0256 + 6899424-6899876,6900084-6900163,6900475-6900820 29 1.0
10_08_0749 - 20282982-20283632,20284081-20284141,20284828-202848... 29 1.3
06_03_1261 - 28814617-28814890,28814989-28815068,28815287-28815703 29 1.3
06_03_0929 - 26028345-26028390,26028474-26028610,26028695-260288... 29 1.3
08_02_0940 - 22822391-22822781,22822875-22823053,22823079-228234... 28 2.3
02_01_0617 + 4625564-4625887,4626824-4626944,4627643-4627833,462... 28 2.3
12_02_1245 - 27308143-27308787,27308923-27308983,27309064-273094... 28 3.1
07_01_0476 - 3593555-3594253,3594684-3594850,3594866-3594964,359... 28 3.1
03_05_0696 - 26856413-26856416,26857917-26858524,26859041-268591... 28 3.1
03_05_0244 - 22295105-22295389 27 4.0
03_01_0163 + 1323296-1323457,1323994-1324125,1324375-1324508,132... 27 4.0
01_02_0105 + 11171422-11171667,11171923-11172111 27 4.0
07_03_1239 + 25077597-25077684,25077779-25078419 27 5.3
03_05_0648 - 26403249-26403357,26405142-26405284,26405425-264056... 27 5.3
01_06_1142 + 34856497-34856698,34857852-34858402 27 7.1
06_01_1077 - 8796951-8797097,8797185-8797442,8797541-8797812,879... 26 9.3
05_01_0224 - 1662818-1663033,1663183-1663266,1663315-1663434,166... 26 9.3
>09_06_0034 + 20370672-20371109,20371120-20371515
Length = 277
Score = 49.6 bits (113), Expect = 9e-07
Identities = 19/57 (33%), Positives = 34/57 (59%)
Query: 30 FKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRNMMRQE 86
F Q+++++S FA + + QLA++ GL R + +WFQN RA+W+ + +E
Sbjct: 34 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERE 90
>04_04_0667 + 27097741-27098085,27098203-27098547
Length = 229
Score = 45.2 bits (102), Expect = 2e-05
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 30 FKHHQLRTMKSYF-AINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRNMMRQE 86
F Q+R+++S F A + + ++ +LA++ GL R + +WFQN RA+WR + +
Sbjct: 30 FTEEQIRSLESMFHAHHAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQLEHD 87
>08_01_0246 - 2028701-2029060,2029149-2030606,2030729-2031160
Length = 749
Score = 44.8 bits (101), Expect = 2e-05
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 21 QRTKRMRTS-FKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWR 79
QR ++ R HQ++ ++++F +PD K K+L+++ GL ++ WFQN R + +
Sbjct: 85 QRPRKKRYHRHTQHQIQELEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 144
Query: 80 RNMMRQETNGV 90
R E N +
Sbjct: 145 TQHERHENNAL 155
>03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657
Length = 390
Score = 44.4 bits (100), Expect = 3e-05
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 34 QLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRNMMRQE 86
Q+RT++ F + + + QLA+ GL R + +WFQN RA+W+ + ++
Sbjct: 138 QVRTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 190
>04_04_1231 -
31934745-31935125,31935230-31935325,31936215-31936277,
31936393-31936593,31936738-31936839,31936972-31937430,
31937524-31937712,31938325-31938442,31939033-31939307,
31939853-31939930
Length = 653
Score = 44.0 bits (99), Expect = 4e-05
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 21 QRTKRMRTS-FKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWR 79
QR ++ R HQ++ M+++F +PD K K+L+++ GL ++ WFQN R + +
Sbjct: 98 QRPRKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 157
Query: 80 RNMMRQETN 88
R E +
Sbjct: 158 NQHERHENS 166
>01_06_0212 + 27575406-27575604,27575723-27576241,27576371-27576387
Length = 244
Score = 43.2 bits (97), Expect = 8e-05
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 24 KRMRTSFKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRNMM 83
KRM S +QL ++ +A+ Q P +L+ K GLS R LQ+WF + R K R+
Sbjct: 49 KRMMKS--PYQLEVLEKTYAVEQYPSETLRAELSAKIGLSDRQLQMWFCHRRLKDRKPPT 106
Query: 84 RQETNGVNGHTSIVPGNGGTPSIVPTALILS 114
+++ + VP P + P AL LS
Sbjct: 107 KRQRR--EEEAAAVPLMAPPPVLPPPALPLS 135
>10_07_0134 + 13289641-13290216,13290435-13290914
Length = 351
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 24 KRMRTSFKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRNMM 83
K+ R S + Q+RT++ F + + QLA+ GL R + +WFQN RA+W+ +
Sbjct: 104 KKRRLSVE--QVRTLERSFESGNKLEPERKAQLARALGLQPRQVAIWFQNRRARWKTKQL 161
Query: 84 RQE 86
++
Sbjct: 162 EKD 164
>08_02_0052 +
11699468-11699700,11699799-11699916,11699991-11700659,
11700741-11700842,11700921-11701181,11701838-11702009,
11702128-11702528,11703171-11703587
Length = 790
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 20 TQRTKRMRTSFKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWR 79
T++ R Q T+ F NPD DLK+LA++ +++ ++ WFQN R K +
Sbjct: 58 TRKKPRRYQLLTMQQKETLNRAFQSCPNPDRNDLKKLAKELNMTETQIKYWFQNCRTKMK 117
Query: 80 RNMMRQE 86
+ +E
Sbjct: 118 KFKNNEE 124
>04_04_0841 -
28574497-28574883,28575815-28576188,28576262-28576439,
28576816-28576896,28578134-28578361,28578460-28578579,
28578646-28579353,28579471-28579588,28579686-28579978,
28580101-28580169
Length = 851
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 19 HTQRTKRMRTSFKH--HQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARA 76
H KR + +H Q++ +++ F +PD K +L+++ GL R ++ WFQN R
Sbjct: 98 HGNPPKRKKRYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRLGLEPRQVKFWFQNRRT 157
Query: 77 KWRRNMMRQETN 88
+ + + R E +
Sbjct: 158 QMKMQLERHENS 169
>02_05_0134 + 26161904-26162776
Length = 290
Score = 42.3 bits (95), Expect = 1e-04
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 30 FKHHQLRTMKSYF-AINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRNMMRQE 86
F Q+R++++ F A + ++ +LA++ GL R + +WFQN RA+WR + +
Sbjct: 68 FTEEQVRSLETTFHARRAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQIEHD 125
>09_04_0468 +
17848144-17848174,17849032-17849378,17849505-17849921
Length = 264
Score = 41.5 bits (93), Expect = 2e-04
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 24 KRMRTSFKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRNMM 83
K+ R S + Q+R ++ F + + + +LA+ GL R + VWFQN RA+W+ +
Sbjct: 38 KKRRLSVE--QVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQL 95
Query: 84 RQE 86
++
Sbjct: 96 ERD 98
>08_01_0574 + 5103466-5103534,5104526-5104806,5104959-5105127
Length = 172
Score = 41.5 bits (93), Expect = 2e-04
Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 21 QRTKRMRTS-FKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWR 79
QR ++ R HQ++ M+++F +PD K K+L+++ GL ++ WFQN R + +
Sbjct: 97 QRPRKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 156
Query: 80 RNM 82
++
Sbjct: 157 ASI 159
>10_08_1025 -
22391267-22391767,22392641-22392736,22392838-22393106,
22393257-22393431,22393503-22393718,22393819-22393926,
22394020-22394544,22394631-22394819,22394924-22395041,
22395172-22395437,22395521-22395658
Length = 866
Score = 41.1 bits (92), Expect = 3e-04
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 33 HQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRNMMRQE 86
HQ++ M++ F +PD K +L+Q+ GL R ++ WFQN R + + R +
Sbjct: 128 HQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQDRAD 181
>01_06_1818 - 40093327-40093384,40093501-40093580,40093661-40093946,
40095007-40095291,40095386-40095513,40095625-40096560,
40096650-40096712,40096801-40096854,40096963-40097139,
40097452-40097583,40097666-40097785,40097935-40098627,
40098760-40099158,40099263-40099271
Length = 1139
Score = 40.7 bits (91), Expect = 4e-04
Identities = 19/74 (25%), Positives = 33/74 (44%)
Query: 19 HTQRTKRMRTSFKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKW 78
H R + QL +++ + N D + LA+K + R ++VWFQN RA+
Sbjct: 1063 HNSGHVRKKLRLSEEQLTVLENMYEAGSNLDQALKQGLAEKLNIKPRQVEVWFQNRRART 1122
Query: 79 RRNMMRQETNGVNG 92
+ + +E G
Sbjct: 1123 KHKQIEEECKNRGG 1136
>08_02_1031 - 23796755-23797171,23797243-23797595,23797676-23797715
Length = 269
Score = 39.9 bits (89), Expect = 7e-04
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 24 KRMRTSFKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRNMM 83
K+ R S + Q+R ++ F + + +LA+ GL R + VWFQN RA+W+ +
Sbjct: 43 KKRRLSVE--QVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQL 100
Query: 84 RQE 86
++
Sbjct: 101 ERD 103
>03_01_0630 + 4635297-4636220
Length = 307
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 34 QLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRNMMRQE 86
Q+R ++ F + D ++A+ GL R + VWFQN RA+W+ + ++
Sbjct: 50 QVRALERSFDTDNKLDPDRKARIARDLGLQPRQVAVWFQNRRARWKTKQLERD 102
>02_05_0618 +
30400338-30400452,30400553-30400692,30400805-30401044,
30401157-30401693
Length = 343
Score = 39.1 bits (87), Expect = 0.001
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 34 QLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRNMMRQE 86
Q+ ++ F + + +LA+K GL R + VWFQN RA+W+ + ++
Sbjct: 85 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERD 137
>02_05_0286 -
27506925-27507278,27508439-27508812,27509041-27509218,
27510878-27511105,27511215-27511316,27511415-27512131,
27512270-27512387,27512500-27512744,27512854-27513054,
27513920-27514324
Length = 973
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 24 KRMRTSFKH--HQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRN 81
KR + +H Q++ +++ F +PD K +L+++ L R ++ WFQN R + +
Sbjct: 266 KRKKRYHRHTPQQIQELEALFKECPHPDEKQRAELSRRLSLDARQVKFWFQNRRTQMKTQ 325
Query: 82 MMRQE 86
+ R E
Sbjct: 326 LERHE 330
>01_06_0040 -
25874308-25874611,25875743-25875822,25876764-25876996,
25877285-25877354
Length = 228
Score = 38.3 bits (85), Expect = 0.002
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 22 RTKRMRTSFKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRN 81
R K++R S Q R ++ F +N K + LA K L R ++VWFQN RA+ +
Sbjct: 75 RPKKLRLS--KEQSRLLEESFRLNHTLTPKQKEALAIKLKLRPRQVEVWFQNRRARTKLK 132
Query: 82 MMRQE 86
E
Sbjct: 133 QTEME 137
>09_06_0020 -
20267190-20267612,20269086-20269495,20269573-20269747,
20270833-20271066,20271164-20271265,20271354-20272091,
20272204-20272321,20272417-20272667,20272768-20272932
Length = 871
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 24 KRMRTSFKH--HQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRN 81
K+ + +H Q++ +++ F +PD K +L+++ L R ++ WFQN R + +
Sbjct: 121 KKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRLNLESRQVKFWFQNRRTQMKTQ 180
Query: 82 MMRQE 86
+ R E
Sbjct: 181 IERHE 185
>08_02_0670 - 19877091-19877618,19880033-19880436,19880505-19880622
Length = 349
Score = 37.5 bits (83), Expect = 0.004
Identities = 14/53 (26%), Positives = 30/53 (56%)
Query: 34 QLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRNMMRQE 86
Q++ ++ F + + +LA++ G++ R + VWFQN RA+W+ + +
Sbjct: 94 QVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHD 146
>09_03_0144 - 12728697-12729238,12729312-12729432
Length = 220
Score = 37.1 bits (82), Expect = 0.005
Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 34 QLRTMKSYFAINQNPDAKDLK-QLAQKTGLSKRVLQVWFQNARAKWRRNMMRQETNGVN- 91
Q+R ++ F + + K +LA++ G++ R + VWFQN RA+W+ + + + +
Sbjct: 100 QVRALERSFEEEKRKLEPERKSELARRLGIAPRQVAVWFQNRRARWKTKQLELDFDRLRA 159
Query: 92 GHTSIVPG 99
H ++ G
Sbjct: 160 AHDELLAG 167
>03_02_0033 - 5148513-5148806,5148928-5149271,5149391-5149472
Length = 239
Score = 37.1 bits (82), Expect = 0.005
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 21 QRTKRMRTSFKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRR 80
++ K+ R S Q R ++ F + + QLA + GL + + VWFQN RA+ +
Sbjct: 58 EQAKKRRLS--DEQARFLEMSFKKERKLETPRKVQLAAELGLDAKQVAVWFQNRRARHKS 115
Query: 81 NMMRQETNGV-NGHTSIVPGN 100
+M +E + + H ++V N
Sbjct: 116 KLMEEEFAKLRSAHDAVVLQN 136
>10_06_0180 + 11526139-11526172,11526365-11527218
Length = 295
Score = 36.7 bits (81), Expect = 0.007
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 34 QLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRNMMRQE 86
Q+R ++ F + D + ++A+ L R + VWFQN RA+W+ + ++
Sbjct: 63 QVRALERSFEADNKLDPERKARIARDLRLHPRQVAVWFQNRRARWKTKQIERD 115
>01_06_0968 +
33466574-33466607,33467087-33467115,33467438-33467595,
33468319-33468436,33468520-33468708,33469008-33469343,
33469468-33469569,33469696-33469890,33469993-33470155,
33470314-33470579,33470670-33470765,33470860-33471255,
33471403-33471501
Length = 726
Score = 36.7 bits (81), Expect = 0.007
Identities = 17/66 (25%), Positives = 33/66 (50%)
Query: 21 QRTKRMRTSFKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRR 80
++ KR Q ++ +F+I +PD + L++ TGL ++ WFQN R + +
Sbjct: 55 EKRKRRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSETTGLGLDQVKFWFQNKRTQVKT 114
Query: 81 NMMRQE 86
++E
Sbjct: 115 MCWKEE 120
>07_03_1291 +
25545749-25546262,25546989-25547669,25547693-25547751,
25549152-25549242,25549330-25549743,25550191-25550243,
25550947-25551177,25551492-25551708,25551790-25551890,
25552446-25552532,25553536-25553676,25553839-25553961,
25554070-25554522,25554931-25555308,25555410-25556060,
25556264-25556368,25556482-25556707,25557204-25557241
Length = 1520
Score = 35.9 bits (79), Expect = 0.012
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 24 KRMRTSFKHH--QLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRR 80
KR T K Q++ ++ +++ Q P ++D+ + A GL+ +++WF+ R K RR
Sbjct: 427 KRENTGTKKSPLQIQMLERFYSEVQYPQSEDIAEYATSVGLTYNQVRIWFKERRRKERR 485
>06_01_0741 -
5510159-5510581,5510862-5511124,5511223-5511400,
5511411-5511698,5511801-5511899,5511973-5512440,
5512559-5512744,5512887-5513004,5513035-5513228
Length = 738
Score = 33.9 bits (74), Expect = 0.047
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 38 MKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRNMMRQE 86
MK F +PD QL+++ GL R ++ WFQN R + + R +
Sbjct: 63 MKWMFKECPHPDENQRAQLSRELGLEPRQIKFWFQNRRTQMKAQHERAD 111
>02_01_0380 + 2757691-2758080,2758389-2758712
Length = 237
Score = 33.9 bits (74), Expect = 0.047
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 54 KQLAQKTGLSKRVLQVWFQNARAK 77
++LA K GLS R ++VWFQN RA+
Sbjct: 134 QELAGKLGLSARQVEVWFQNRRAR 157
>06_01_0292 + 2136637-2137050,2137162-2137671
Length = 307
Score = 33.5 bits (73), Expect = 0.062
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 25 RMRTSFKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAK 77
R + Q ++ F + + K LA + GL R ++VWFQN RA+
Sbjct: 113 RKKLRLSKDQAAVLEECFKTHSTLNPKQKVALANRLGLRPRQVEVWFQNRRAR 165
>04_04_0710 -
27453135-27453480,27453647-27453726,27453893-27454107,
27454227-27454329
Length = 247
Score = 32.7 bits (71), Expect = 0.11
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 25 RMRTSFKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAK 77
R + Q ++ F + + + LAQ+ GL R ++VWFQN RA+
Sbjct: 81 RKKLRLSKDQSAVLEDSFREHPTLNPRQKATLAQQLGLRPRQVEVWFQNRRAR 133
>03_01_0167 +
1374578-1375243,1375895-1376277,1377947-1378007,
1378721-1379386
Length = 591
Score = 32.7 bits (71), Expect = 0.11
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 48 PDAKDLKQLAQKTGLSKRVLQVWFQNARAK-WR---RNMMRQETNGVNGHTSIVPGNGGT 103
P D LA++TGLS+ + WF NAR + W+ M +E G +G G+GG
Sbjct: 352 PSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYVEEMKGQDGG----DGSGGQ 407
Query: 104 PSIVP 108
S+ P
Sbjct: 408 GSLNP 412
>06_01_0061 + 527417-527856,527957-528017,528113-528685
Length = 357
Score = 32.3 bits (70), Expect = 0.14
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 48 PDAKDLKQLAQKTGLSKRVLQVWFQNARAK-WR---RNMMRQET--NGVNGHTSIVPGNG 101
P+ D LA++TGLS+ + WF NAR + W+ +M ++ET +G+ + P
Sbjct: 149 PNDVDKHILARQTGLSRSQVSNWFINARVRLWKPMIEDMYKEETKPESSDGNNKLNPSAA 208
Query: 102 G 102
G
Sbjct: 209 G 209
>07_03_1043 + 23506148-23506226,23506344-23506693,23506782-23507075
Length = 240
Score = 31.9 bits (69), Expect = 0.19
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 56 LAQKTGLSKRVLQVWFQNARAKWRRNMMRQE 86
LA + GL + + VWFQN RA+ + ++ +E
Sbjct: 92 LASELGLDPKQVAVWFQNRRARHKSKLLEEE 122
>05_05_0075 +
22209322-22210041,22210323-22210391,22210775-22211145,
22212291-22212351,22212496-22213086
Length = 603
Score = 31.5 bits (68), Expect = 0.25
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 48 PDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRNMMRQETN 88
P D + LA++TGL++ + WF NAR + + M+ + N
Sbjct: 389 PTDSDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEIHN 429
>11_01_0371 - 2821224-2822036,2822162-2822222,2823755-2824158
Length = 425
Score = 31.1 bits (67), Expect = 0.33
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 48 PDAKDLKQLAQKTGLSKRVLQVWFQNARAK-WR---RNMMRQETNGVNGHTSIVPGNGGT 103
P D LA++TGL++ + WF NAR + W+ M +ET +G G+ G+
Sbjct: 137 PKDSDKIMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEETKDQDGGGGAGAGDEGS 196
>10_08_0929 + 21633179-21633377,21633466-21633809,21633905-21634297
Length = 311
Score = 31.1 bits (67), Expect = 0.33
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 25 RMRTSFKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAK 77
R + Q ++ F + + K LA++ L R ++VWFQN RA+
Sbjct: 156 RKKLRLSKDQAAVLEDTFKEHNTLNPKQKAALARQLNLKPRQVEVWFQNRRAR 208
>07_03_0126 - 13797395-13797451,13797590-13797707,13797802-13798004
Length = 125
Score = 31.1 bits (67), Expect = 0.33
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 24 KRMRTSFKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAK 77
KRM+ Q++ ++S F QLA+K G+ +R ++ WFQN R +
Sbjct: 53 KRMKRH-TDDQIKHLESVFERCTYLGGNQRVQLAKKLGMEERQVKFWFQNRRTR 105
>05_07_0112 -
27755604-27756449,27756624-27756887,27757428-27757532,
27757626-27758249,27759048-27759596,27759665-27760372,
27760449-27760658,27761266-27761421,27761524-27761664,
27762015-27762101,27762209-27762309,27763071-27763293,
27763384-27763548,27763621-27763713,27763801-27764292,
27764729-27764805,27765184-27765681,27765818-27766046
Length = 1855
Score = 31.1 bits (67), Expect = 0.33
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 33 HQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRR 80
+QL ++ + + P+ +L+ K GL+ R LQ+WF + R K R+
Sbjct: 66 YQLEVLERTYTEDPYPNETMRAELSVKLGLTDRQLQMWFCHRRLKDRK 113
>06_01_0878 +
6735266-6735340,6735946-6736041,6738610-6738720,
6738816-6739309,6739422-6739587,6739666-6739789,
6739874-6739986,6740085-6740693,6743095-6743385,
6743845-6743913,6744099-6744188,6744281-6744696,
6744882-6744969
Length = 913
Score = 30.7 bits (66), Expect = 0.43
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 38 MKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRNMMRQETNGVNGHTSIV 97
+K++F + P + LAQ+ GL+ + WF + R + R ++ N + HT+
Sbjct: 718 LKAHFKEDPYPSRATKENLAQELGLTFNQVTKWFSSTR-HYARVAATKKENNIENHTAEN 776
Query: 98 PGNGGT 103
N T
Sbjct: 777 NNNTNT 782
>01_06_1342 -
36438869-36439459,36439567-36439627,36440751-36441130,
36441955-36442761
Length = 612
Score = 30.7 bits (66), Expect = 0.43
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 48 PDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRNMMRQETN 88
P D + LA++TGL++ + WF NAR + + M+ + N
Sbjct: 398 PTDGDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEIHN 438
>03_01_0456 -
3495537-3496205,3496304-3496364,3496447-3496829,
3496924-3497613
Length = 600
Score = 30.3 bits (65), Expect = 0.57
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 48 PDAKDLKQLAQKTGLSKRVLQVWFQNARAK-WR---RNMMRQETNG-VNGHTSIVPGNGG 102
P + LA++TGLS+ + WF NAR + W+ M ++E ++ ++S G GG
Sbjct: 360 PKDSEKLMLARQTGLSRGQVSNWFINARVRLWKPMIEEMYKEEFGAEMDSNSSSENGGGG 419
>06_01_0290 + 2122758-2123015,2123128-2123544
Length = 224
Score = 29.9 bits (64), Expect = 0.76
Identities = 15/53 (28%), Positives = 23/53 (43%)
Query: 25 RMRTSFKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAK 77
R + Q ++ F + K LA+ L R ++VWFQN RA+
Sbjct: 61 RKKLRLSKDQAAVLEECFKTHHTLTPKQKVALAKSLNLRPRQVEVWFQNRRAR 113
>02_04_0278 -
21507288-21507726,21507893-21507972,21508587-21508840,
21508988-21509180
Length = 321
Score = 29.9 bits (64), Expect = 0.76
Identities = 15/53 (28%), Positives = 23/53 (43%)
Query: 25 RMRTSFKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAK 77
R + Q ++ F + K LA + L R ++VWFQN RA+
Sbjct: 124 RKKLRLSKEQSSFLEDSFKEHSTLTPKQKSDLANRLNLRPRQVEVWFQNRRAR 176
>09_04_0318 -
16620177-16620582,16620686-16620765,16620873-16621213,
16621298-16621559
Length = 362
Score = 29.5 bits (63), Expect = 1.0
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 25 RMRTSFKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAK 77
R + Q ++ F + + K LA++ L R ++VWFQN RA+
Sbjct: 176 RKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRAR 228
>03_02_0256 + 6899424-6899876,6900084-6900163,6900475-6900820
Length = 292
Score = 29.5 bits (63), Expect = 1.0
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 25 RMRTSFKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAK 77
R + Q ++ F + + K LA++ L R ++VWFQN RA+
Sbjct: 126 RKKLRLTKEQSALLEDRFREHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRAR 178
>10_08_0749 -
20282982-20283632,20284081-20284141,20284828-20284872,
20285293-20285672,20286382-20287050
Length = 601
Score = 29.1 bits (62), Expect = 1.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 48 PDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRNMMRQ 85
P D LA++TGLS+ + WF NAR + + M+ +
Sbjct: 367 PSDVDKHILARQTGLSRSQVANWFINARVRLWKPMVEE 404
>06_03_1261 - 28814617-28814890,28814989-28815068,28815287-28815703
Length = 256
Score = 29.1 bits (62), Expect = 1.3
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 25 RMRTSFKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAK 77
R + Q ++ F ++ +LA++ L R ++VWFQN RA+
Sbjct: 114 RKKLQLTKEQSTLLEDSFRVHNILSHAQKHELARQLKLKPRQVEVWFQNRRAR 166
>06_03_0929 -
26028345-26028390,26028474-26028610,26028695-26028826,
26028901-26029109,26029554-26029674,26030730-26031080
Length = 331
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 48 PDAKDLKQLAQKTGLSKRVLQVWFQNARAK-WRRN 81
P +D +L Q+TGL + + WF N R + W N
Sbjct: 270 PTEEDKARLVQETGLQLKQINNWFINQRKRNWHSN 304
>08_02_0940 -
22822391-22822781,22822875-22823053,22823079-22823428,
22823522-22823765
Length = 387
Score = 28.3 bits (60), Expect = 2.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 49 DAKDLKQLAQKTGLSKRVLQVWFQNARAK 77
+ K LA++ L R ++VWFQN RA+
Sbjct: 230 EQKQKVALAKQLNLRPRQVEVWFQNRRAR 258
>02_01_0617 +
4625564-4625887,4626824-4626944,4627643-4627833,
4627910-4628041,4628132-4628269
Length = 301
Score = 28.3 bits (60), Expect = 2.3
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 48 PDAKDLKQLAQKTGLSKRVLQVWFQNARAK-WRRN 81
P D +L Q+TGL + + WF N R + W N
Sbjct: 255 PTEDDKARLVQETGLQLKQINNWFINQRKRNWHSN 289
>12_02_1245 -
27308143-27308787,27308923-27308983,27309064-27309440,
27309657-27310517
Length = 647
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 48 PDAKDLKQLAQKTGLSKRVLQVWFQNARAK-WR 79
P + LA++TGL++ + WF NAR + W+
Sbjct: 415 PKDSEKLMLARQTGLTRSQISNWFINARVRLWK 447
>07_01_0476 -
3593555-3594253,3594684-3594850,3594866-3594964,
3595620-3595806,3595880-3595948,3596551-3596752,
3597124-3597362,3598374-3598637
Length = 641
Score = 27.9 bits (59), Expect = 3.1
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 5/73 (6%)
Query: 46 QNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRNMMRQETNGVNGHTSIVPGNGGTPS 105
+NP+ + LAQK+GL ++ F A K VN ++++ PG P
Sbjct: 523 RNPEWEGSPNLAQKSGLISTLISTHFSTAAQK-----PAPRPADVNINSAVYPGGPPVPV 577
Query: 106 IVPTALILSEPLQ 118
P L +P +
Sbjct: 578 QTPKLLKFVDPTE 590
>03_05_0696 -
26856413-26856416,26857917-26858524,26859041-26859101,
26859181-26859557,26860314-26861156
Length = 630
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 48 PDAKDLKQLAQKTGLSKRVLQVWFQNARAK-WR 79
P + LA++TGL++ + WF NAR + W+
Sbjct: 409 PKDSEKLMLARQTGLTRSQISNWFINARVRLWK 441
>03_05_0244 - 22295105-22295389
Length = 94
Score = 27.5 bits (58), Expect = 4.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 99 GNGGTPSIVPTALILSEPLQPLEDLRVHTPHPMAFNE 135
G GG +A++ S P P+E+ R P PMA E
Sbjct: 23 GGGGCSVAYSSAILPSGPSLPVEEDRSGRPDPMATTE 59
>03_01_0163 +
1323296-1323457,1323994-1324125,1324375-1324508,
1324618-1324621
Length = 143
Score = 27.5 bits (58), Expect = 4.0
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 48 PDAKDLKQLAQKTGLSKRVLQVWFQNARAK-WRRN 81
P D +L ++TGL + + WF N R + W N
Sbjct: 97 PTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNN 131
>01_02_0105 + 11171422-11171667,11171923-11172111
Length = 144
Score = 27.5 bits (58), Expect = 4.0
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 48 PDAKDLKQLAQKTGLSKRVLQVWFQNARAK-WR 79
P +D +LA +TGL + + WF N R + W+
Sbjct: 81 PTEEDKLRLAARTGLDPKQINNWFINQRKRHWK 113
>07_03_1239 + 25077597-25077684,25077779-25078419
Length = 242
Score = 27.1 bits (57), Expect = 5.3
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 98 PGNGGTPSIVPTALILSEPLQPLEDLRVHTPHPMAF 133
PG G ++P L L+ P++P + VH PH + F
Sbjct: 160 PGARGVRGVLPGLLHLALPVRP---MLVHAPHRLRF 192
>03_05_0648 -
26403249-26403357,26405142-26405284,26405425-26405675,
26405707-26405713
Length = 169
Score = 27.1 bits (57), Expect = 5.3
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 48 PDAKDLKQLAQKTGLSKRVLQVWFQNARAK-WR 79
P + LA+ TGL K+ + WF N R + W+
Sbjct: 85 PSEAEKAALAESTGLDKKQVTNWFINQRKRHWK 117
>01_06_1142 + 34856497-34856698,34857852-34858402
Length = 250
Score = 26.6 bits (56), Expect = 7.1
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 23 TKRMRTSFKHHQLRTMKSYFAI-NQNPDAKDLK----QLAQKTGLSKRVLQVWFQNARAK 77
T R R + QL+ +++ F N P + +K +L+Q +S+ + WFQN RA+
Sbjct: 88 TARQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRAR 147
Query: 78 WRRNMMRQETN 88
+R N
Sbjct: 148 SKRKQAALPNN 158
>06_01_1077 -
8796951-8797097,8797185-8797442,8797541-8797812,
8797907-8797967,8798082-8798159,8798380-8798439,
8798543-8798629,8798717-8798941,8799003-8799091,
8799137-8799251
Length = 463
Score = 26.2 bits (55), Expect = 9.3
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 87 TNGVNGHTSIVPGNGGTPSI-VPTALILSEPLQPLEDLRVHTPHPMAFNEL 136
T G H + GNGGT + + A L E + + DLRV M+ +EL
Sbjct: 224 TGGSGDHGHSIGGNGGTLAFDLEYARWLDEHQRHINDLRVALNAQMSDDEL 274
>05_01_0224 -
1662818-1663033,1663183-1663266,1663315-1663434,
1664527-1664655,1664743-1664988
Length = 264
Score = 26.2 bits (55), Expect = 9.3
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 48 PDAKDLKQLAQKTGLSKRVLQVWFQNARAK-WR 79
P +D +LA TGL + + WF N R + W+
Sbjct: 81 PTEEDKVRLAAMTGLDPKQINNWFINQRKRHWK 113
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.130 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,719,684
Number of Sequences: 37544
Number of extensions: 139252
Number of successful extensions: 392
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 337
Number of HSP's gapped (non-prelim): 61
length of query: 137
length of database: 14,793,348
effective HSP length: 75
effective length of query: 62
effective length of database: 11,977,548
effective search space: 742607976
effective search space used: 742607976
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 55 (26.2 bits)
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