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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002126-TA|BGIBMGA002126-PA|IPR009057|Homeodomain-like
         (192 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_5495| Best HMM Match : No HMM Matches (HMM E-Value=.)               38   0.005
SB_16450| Best HMM Match : No HMM Matches (HMM E-Value=.)              38   0.007
SB_16449| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.009
SB_32587| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.012
SB_22965| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.028
SB_57648| Best HMM Match : Homeobox (HMM E-Value=5.3e-30)              35   0.050
SB_47478| Best HMM Match : No HMM Matches (HMM E-Value=.)              35   0.050
SB_41749| Best HMM Match : Homeobox (HMM E-Value=4.1e-29)              34   0.087
SB_21452| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.15 
SB_20497| Best HMM Match : Homeobox (HMM E-Value=1.4013e-45)           33   0.15 
SB_9613| Best HMM Match : OAR (HMM E-Value=0.018)                      33   0.15 
SB_40906| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.20 
SB_21878| Best HMM Match : Homeobox (HMM E-Value=1.5e-25)              33   0.20 
SB_42150| Best HMM Match : Homeobox (HMM E-Value=1.8e-29)              33   0.20 
SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43)               33   0.20 
SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32)              33   0.20 
SB_10895| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.20 
SB_21036| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.27 
SB_57651| Best HMM Match : Homeobox (HMM E-Value=3e-29)                32   0.35 
SB_39723| Best HMM Match : Homeobox (HMM E-Value=5.4e-32)              32   0.35 
SB_36278| Best HMM Match : Homeobox (HMM E-Value=4.8e-30)              32   0.35 
SB_26105| Best HMM Match : Homeobox (HMM E-Value=1.1e-30)              32   0.35 
SB_11862| Best HMM Match : Homeobox (HMM E-Value=1.1e-16)              32   0.35 
SB_37814| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.35 
SB_11160| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.35 
SB_48629| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.46 
SB_30811| Best HMM Match : Homeobox (HMM E-Value=2.5e-26)              31   0.46 
SB_596| Best HMM Match : Homeobox (HMM E-Value=4.5e-32)                31   0.46 
SB_53178| Best HMM Match : Homeobox (HMM E-Value=2.5e-26)              31   0.46 
SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.46 
SB_51696| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.46 
SB_19758| Best HMM Match : Homeobox (HMM E-Value=1.6e-20)              31   0.46 
SB_45690| Best HMM Match : Homeobox (HMM E-Value=4.6e-31)              31   0.61 
SB_16156| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.61 
SB_10406| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.61 
SB_10405| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.61 
SB_48630| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.81 
SB_15| Best HMM Match : Homeobox (HMM E-Value=4.1e-30)                 31   0.81 
SB_49708| Best HMM Match : Homeobox (HMM E-Value=8.1e-30)              31   0.81 
SB_22062| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.81 
SB_18749| Best HMM Match : Homeobox (HMM E-Value=6.1e-28)              31   0.81 
SB_29287| Best HMM Match : Homeobox (HMM E-Value=1.4e-25)              30   1.1  
SB_16448| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.1  
SB_8992| Best HMM Match : Homeobox (HMM E-Value=1.4e-25)               30   1.1  
SB_58034| Best HMM Match : VWA (HMM E-Value=0)                         30   1.4  
SB_10426| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.9  
SB_34509| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.9  
SB_53611| Best HMM Match : Homeobox (HMM E-Value=1.2e-25)              29   2.5  
SB_42639| Best HMM Match : Homeobox (HMM E-Value=1e-26)                29   2.5  
SB_34953| Best HMM Match : Homeobox (HMM E-Value=1e-25)                29   2.5  
SB_29536| Best HMM Match : Homeobox (HMM E-Value=2.6e-30)              29   2.5  
SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26)                29   2.5  
SB_8578| Best HMM Match : DUF807 (HMM E-Value=6.7)                     29   2.5  
SB_8063| Best HMM Match : Homeobox (HMM E-Value=8.5e-24)               29   2.5  
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)                       29   3.3  
SB_8774| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   3.3  
SB_14695| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.3  
SB_34627| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.7  
SB_32283| Best HMM Match : Homeobox (HMM E-Value=4.5e-20)              28   5.7  
SB_7446| Best HMM Match : SH2 (HMM E-Value=2.7e-22)                    28   5.7  
SB_29192| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.7  
SB_49275| Best HMM Match : Homeobox (HMM E-Value=2.8e-27)              27   7.5  
SB_22870| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.5  
SB_50832| Best HMM Match : Homeobox (HMM E-Value=8.7e-23)              27   7.5  
SB_37079| Best HMM Match : Homeobox (HMM E-Value=1.2e-28)              27   7.5  
SB_37025| Best HMM Match : Homeobox (HMM E-Value=1.3e-16)              27   7.5  
SB_36166| Best HMM Match : Homeobox (HMM E-Value=2.6e-28)              27   7.5  
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.5  
SB_24287| Best HMM Match : Homeobox (HMM E-Value=9e-28)                27   7.5  
SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.5  
SB_10407| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   10.0 
SB_3037| Best HMM Match : Homeobox (HMM E-Value=4.3e-27)               27   10.0 
SB_49289| Best HMM Match : Homeobox (HMM E-Value=6e-30)                27   10.0 
SB_41873| Best HMM Match : Homeobox (HMM E-Value=2.3e-29)              27   10.0 

>SB_5495| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 247

 Score = 37.9 bits (84), Expect = 0.005
 Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 12/95 (12%)

Query: 57  PTFIFHSDERLNLHSGTQPTSAYEERFHALRQMKRVVEVFKEDGASASRCRR------GA 110
           P+  F  + R N     Q        F+   Q++R+ EVF+ D       R       G 
Sbjct: 4   PSLTFEEESRKNTAKARQRR---RRTFYTDSQLRRMEEVFERDRFPGIAARESLSEELGI 60

Query: 111 KPQSREPATAAQF---NVWFQNARAKWRRMVTKQE 142
           K    +  T A +    VWFQN RA+WR+   K +
Sbjct: 61  KEDRLQVVTRADYFGKTVWFQNRRARWRKSEIKNK 95


>SB_16450| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 286

 Score = 37.5 bits (83), Expect = 0.007
 Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 10/70 (14%)

Query: 121 AQFNVWFQNARAKWRRMVTKQENKMSDKCSPDGSLEMDMYHGPMGSIQSLPPHSPPYSVM 180
           A+  VWFQN RAKWR    K+E  +  + SP+      MY G  G  + +P   PP    
Sbjct: 134 ARVQVWFQNRRAKWR----KREKALGRE-SPN-----FMYPGHGGEYRGVPTELPPLHTA 183

Query: 181 GGPPSPNSME 190
             P  P+ M+
Sbjct: 184 YQPVPPSFMD 193


>SB_16449| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 266

 Score = 37.1 bits (82), Expect = 0.009
 Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 9/68 (13%)

Query: 125 VWFQNARAKWRRMVTKQENKMSDKCSPD-----GSLEM-DMYHGPMGSIQSLPPHSPPYS 178
           VWFQN RAKWRR    +   + D  SP      GSL   DM+  P   +    P+   + 
Sbjct: 131 VWFQNKRAKWRREEKMEMASLQDLPSPSRTSGFGSLTFSDMWKNP---LTLTGPYGALFP 187

Query: 179 VMGGPPSP 186
             GG P P
Sbjct: 188 RSGGSPPP 195


>SB_32587| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 207

 Score = 36.7 bits (81), Expect = 0.012
 Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 13/109 (11%)

Query: 74  QPTSAYEERFHALRQMKRVVEVFKEDGASASRCR--RGAKPQSREPATAAQFNVWFQNAR 131
           Q      ++   +   +++VE+ KE   +   CR  R    QS E  T  Q  +WFQN R
Sbjct: 62  QTKECTSDKNRTIYSTRQLVELEKEFHYNRYLCRPRRIEIAQSLE-LTEKQVKIWFQNRR 120

Query: 132 AKWR---RMVTKQ-ENKMSDKC------SPDGSLEMDMYHGPMGSIQSL 170
            KW+   ++V K  E+++ ++       +PDG   + MY   + S+Q +
Sbjct: 121 MKWKKENKLVEKAIESEIKERVKNLSTQNPDGFGSLPMYANDLNSLQQM 169


>SB_22965| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 311

 Score = 35.5 bits (78), Expect = 0.028
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 11/57 (19%)

Query: 124 NVWFQNARAKWRRMVTKQENKMSDKCSPDGSL--EMDMYHGPMGSIQSLPPHSPPYS 178
           NVWFQN RAKWR+          +KC    S+  E  +Y   +     LPPH  P S
Sbjct: 173 NVWFQNRRAKWRK---------KEKCWGHSSIMAEYGLYGAMVRHSLPLPPHLTPSS 220


>SB_57648| Best HMM Match : Homeobox (HMM E-Value=5.3e-30)
          Length = 205

 Score = 34.7 bits (76), Expect = 0.050
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 122 QFNVWFQNARAKWRRMVTKQENKMSDKCSP 151
           Q   WFQN R KW++   K E  + DK  P
Sbjct: 163 QVKTWFQNRRMKWKKETGKDEEDVGDKDKP 192


>SB_47478| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 233

 Score = 34.7 bits (76), Expect = 0.050
 Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 1/72 (1%)

Query: 121 AQFNVWFQNARAKWRRMVTKQENKMSDKCSPDGSLEMDMYHGPMGSIQSLPPHSPPYSVM 180
           ++  VWF+N RAK R++    ENK   +  P  S               LPPH P     
Sbjct: 85  SRVQVWFKNRRAKTRQLEKAAENKQKPERKPSTSTNSTPTTSAATPPTPLPPH-PVAKDT 143

Query: 181 GGPPSPNSMECP 192
               SP+  + P
Sbjct: 144 SSKSSPSPYDLP 155


>SB_41749| Best HMM Match : Homeobox (HMM E-Value=4.1e-29)
          Length = 269

 Score = 33.9 bits (74), Expect = 0.087
 Identities = 12/31 (38%), Positives = 20/31 (64%)

Query: 115 REPATAAQFNVWFQNARAKWRRMVTKQENKM 145
           R   + +Q  +WFQN RAKWR+   K+ +++
Sbjct: 110 RTGLSESQVQIWFQNRRAKWRKQQRKRRHEI 140


>SB_21452| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 275

 Score = 33.1 bits (72), Expect = 0.15
 Identities = 12/18 (66%), Positives = 14/18 (77%)

Query: 119 TAAQFNVWFQNARAKWRR 136
           T A+  VWFQN RAKWR+
Sbjct: 103 TEARIQVWFQNRRAKWRK 120


>SB_20497| Best HMM Match : Homeobox (HMM E-Value=1.4013e-45)
          Length = 527

 Score = 33.1 bits (72), Expect = 0.15
 Identities = 13/26 (50%), Positives = 16/26 (61%)

Query: 119 TAAQFNVWFQNARAKWRRMVTKQENK 144
           T  Q  VWFQN R KW+R+  K+  K
Sbjct: 132 TERQVKVWFQNRRMKWKRVKGKRPEK 157


>SB_9613| Best HMM Match : OAR (HMM E-Value=0.018)
          Length = 138

 Score = 33.1 bits (72), Expect = 0.15
 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 11/56 (19%)

Query: 125 VWFQNARAKWRRMVTKQENKMSDKCSPDGSL--EMDMYHGPMGSIQSLPPHSPPYS 178
           VWFQN RAKWR+          +KC    S+  E  +Y   +     LPPH  P S
Sbjct: 1   VWFQNRRAKWRK---------KEKCWGHSSIMAEYGLYGAMVRHSLPLPPHLTPSS 47


>SB_40906| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 154

 Score = 32.7 bits (71), Expect = 0.20
 Identities = 12/18 (66%), Positives = 14/18 (77%)

Query: 119 TAAQFNVWFQNARAKWRR 136
           T A+  VWFQN RAKWR+
Sbjct: 12  TEARVQVWFQNRRAKWRK 29


>SB_21878| Best HMM Match : Homeobox (HMM E-Value=1.5e-25)
          Length = 99

 Score = 32.7 bits (71), Expect = 0.20
 Identities = 13/29 (44%), Positives = 18/29 (62%)

Query: 122 QFNVWFQNARAKWRRMVTKQENKMSDKCS 150
           Q  VWFQN R KWR+ +  +E K  ++ S
Sbjct: 50  QVKVWFQNRRTKWRQDMKDEERKDEEEGS 78


>SB_42150| Best HMM Match : Homeobox (HMM E-Value=1.8e-29)
          Length = 122

 Score = 32.7 bits (71), Expect = 0.20
 Identities = 11/19 (57%), Positives = 14/19 (73%)

Query: 119 TAAQFNVWFQNARAKWRRM 137
           T  Q  +WFQN RAKW+R+
Sbjct: 65  TEVQVKIWFQNRRAKWKRV 83


>SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43)
          Length = 511

 Score = 32.7 bits (71), Expect = 0.20
 Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 1/32 (3%)

Query: 119 TAAQFNVWFQNARAKWRRMV-TKQENKMSDKC 149
           T     VWFQNARAK+RR V    +  MS  C
Sbjct: 460 TKRVLQVWFQNARAKFRRTVCNTSQTPMSPSC 491


>SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32)
          Length = 1168

 Score = 32.7 bits (71), Expect = 0.20
 Identities = 12/18 (66%), Positives = 14/18 (77%)

Query: 119 TAAQFNVWFQNARAKWRR 136
           T A+  VWFQN RAKWR+
Sbjct: 444 TEARVQVWFQNRRAKWRK 461


>SB_10895| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 496

 Score = 32.7 bits (71), Expect = 0.20
 Identities = 12/18 (66%), Positives = 14/18 (77%)

Query: 119 TAAQFNVWFQNARAKWRR 136
           T A+  VWFQN RAKWR+
Sbjct: 326 TEARVQVWFQNRRAKWRK 343


>SB_21036| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 243

 Score = 32.3 bits (70), Expect = 0.27
 Identities = 11/17 (64%), Positives = 14/17 (82%)

Query: 121 AQFNVWFQNARAKWRRM 137
           A+  VWFQN RAKWR++
Sbjct: 110 ARIQVWFQNRRAKWRKL 126


>SB_57651| Best HMM Match : Homeobox (HMM E-Value=3e-29)
          Length = 294

 Score = 31.9 bits (69), Expect = 0.35
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 121 AQFNVWFQNARAKWRRMVTKQENKMSDKCSPDGS 154
           AQ   WFQN R KW++   K  +   DK   + S
Sbjct: 210 AQVKTWFQNRRMKWKKKNNKNSSVEKDKEKSESS 243


>SB_39723| Best HMM Match : Homeobox (HMM E-Value=5.4e-32)
          Length = 257

 Score = 31.9 bits (69), Expect = 0.35
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 119 TAAQFNVWFQNARAKWRRMVTKQENKMSDK-CSPD 152
           T  Q  +WFQN R KW+R     + K+  K C  D
Sbjct: 146 TETQVKIWFQNRRMKWKRCNKNVDIKVDRKECGTD 180


>SB_36278| Best HMM Match : Homeobox (HMM E-Value=4.8e-30)
          Length = 166

 Score = 31.9 bits (69), Expect = 0.35
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 9/54 (16%)

Query: 119 TAAQFNVWFQNARAKWRRMVTKQENKMSDKCSPDGSLEMDMYHGPMGSIQSLPP 172
           T  Q  +WFQN R KW     K++N   D  +P      ++ HGP  S+   PP
Sbjct: 88  TETQVKIWFQNRRTKW-----KKQNPGMDVTAP---TRPNIPHGP-ASLAGYPP 132


>SB_26105| Best HMM Match : Homeobox (HMM E-Value=1.1e-30)
          Length = 315

 Score = 31.9 bits (69), Expect = 0.35
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 119 TAAQFNVWFQNARAKWRRMVTKQENKMS 146
           T  Q  VWFQN R KWR+    +++  S
Sbjct: 288 TETQVKVWFQNRRIKWRKQKLDRQSSTS 315


>SB_11862| Best HMM Match : Homeobox (HMM E-Value=1.1e-16)
          Length = 99

 Score = 31.9 bits (69), Expect = 0.35
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 121 AQFNVWFQNARAKWRRMVTKQENKMSDKCSPDGS 154
           AQ   WFQN R KW++   K  +   DK   + S
Sbjct: 31  AQVKTWFQNRRMKWKKKNNKNSSVEKDKEKSESS 64


>SB_37814| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 333

 Score = 31.9 bits (69), Expect = 0.35
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%)

Query: 88  QMKRVVEVFKEDGASASRCRRGAKPQSREPATAAQFNVWFQNARAKWRRMVTKQENKMSD 147
           Q++R+ + FKE+       R  A+       T  Q   WFQN R KWR+ + K E  +S 
Sbjct: 212 QIQRLEKEFKEEKYLTESKR--AELSKDLGMTETQVKTWFQNRRTKWRKEL-KDEIALST 268

Query: 148 KCS 150
           + +
Sbjct: 269 RAA 271


>SB_11160| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 236

 Score = 31.9 bits (69), Expect = 0.35
 Identities = 12/25 (48%), Positives = 15/25 (60%)

Query: 119 TAAQFNVWFQNARAKWRRMVTKQEN 143
           T +Q  VWFQN R KWR+    + N
Sbjct: 175 TESQVKVWFQNRRTKWRKRHAAEMN 199


>SB_48629| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 242

 Score = 31.5 bits (68), Expect = 0.46
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 119 TAAQFNVWFQNARAKWRRMVTKQENKMSDK 148
           T  Q  VWFQN R KW+R+  K E K   K
Sbjct: 185 TERQVKVWFQNRRMKWKRV--KGERKPEKK 212


>SB_30811| Best HMM Match : Homeobox (HMM E-Value=2.5e-26)
          Length = 133

 Score = 31.5 bits (68), Expect = 0.46
 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)

Query: 75  PTSAYEERFHALRQMKRVVEVFKEDGASASRCR-RGAKPQSREPATAAQFNVWFQNARAK 133
           P+ + ++RF   +  +++VE+ KE   S    R R  +  +    T  Q  +WFQN R K
Sbjct: 19  PSPSQKKRFTFTQ--RQLVELEKEFHFSKYLTRTRRIEIATTLKLTEMQIKIWFQNRRMK 76

Query: 134 WRR 136
           W+R
Sbjct: 77  WKR 79


>SB_596| Best HMM Match : Homeobox (HMM E-Value=4.5e-32)
          Length = 162

 Score = 31.5 bits (68), Expect = 0.46
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query: 119 TAAQFNVWFQNARAKWRRMVTKQ 141
           T  Q  +WFQN R KW+R +  +
Sbjct: 66  TETQIKIWFQNRRTKWKRKMAAE 88


>SB_53178| Best HMM Match : Homeobox (HMM E-Value=2.5e-26)
          Length = 428

 Score = 31.5 bits (68), Expect = 0.46
 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)

Query: 75  PTSAYEERFHALRQMKRVVEVFKEDGASASRCR-RGAKPQSREPATAAQFNVWFQNARAK 133
           P+ + ++RF   +  +++VE+ KE   S    R R  +  +    T  Q  +WFQN R K
Sbjct: 246 PSPSQKKRFTFTQ--RQLVELEKEFHFSKYLTRTRRIEIATTLKLTEMQIKIWFQNRRMK 303

Query: 134 WRR 136
           W+R
Sbjct: 304 WKR 306


>SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1267

 Score = 31.5 bits (68), Expect = 0.46
 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 3/28 (10%)

Query: 119 TAAQFNVWFQNARAKWRRMVTKQENKMS 146
           T A+  VWF+N RAKWR+   K++N  S
Sbjct: 781 TEARVRVWFKNRRAKWRK---KEKNNPS 805



 Score = 29.9 bits (64), Expect = 1.4
 Identities = 15/51 (29%), Positives = 23/51 (45%)

Query: 121  AQFNVWFQNARAKWRRMVTKQENKMSDKCSPDGSLEMDMYHGPMGSIQSLP 171
            ++  VWF+N RAK+R+     E +     S +   E   YH P+      P
Sbjct: 1150 SRIQVWFKNRRAKYRKSKESAERQGGTSESSEERDEDKDYHEPIAESNHQP 1200


>SB_51696| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 401

 Score = 31.5 bits (68), Expect = 0.46
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query: 119 TAAQFNVWFQNARAKWRRMVTKQ 141
           T  Q  +WFQN R KW+R +  +
Sbjct: 253 TETQVKIWFQNRRNKWKRQIAAE 275


>SB_19758| Best HMM Match : Homeobox (HMM E-Value=1.6e-20)
          Length = 228

 Score = 31.5 bits (68), Expect = 0.46
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)

Query: 87  RQMKRVVEVFKEDGASASRCRRGAKPQSREPATAAQFNVWFQNARAKWRR 136
           +Q++R+ E F  +    S+ RR A     +  T AQ   WFQN R +WR+
Sbjct: 130 KQIQRLEEEFVCE-KYISKSRRSALAAEID-LTDAQVRTWFQNRRTRWRK 177


>SB_45690| Best HMM Match : Homeobox (HMM E-Value=4.6e-31)
          Length = 255

 Score = 31.1 bits (67), Expect = 0.61
 Identities = 15/46 (32%), Positives = 22/46 (47%)

Query: 108 RGAKPQSREPATAAQFNVWFQNARAKWRRMVTKQENKMSDKCSPDG 153
           R ++  S+   T  Q  +WFQN R KW++   +   K S   S  G
Sbjct: 164 RRSEMASQLNLTERQVKIWFQNRRMKWKKCNAQALTKTSKSPSQGG 209


>SB_16156| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 255

 Score = 31.1 bits (67), Expect = 0.61
 Identities = 15/46 (32%), Positives = 22/46 (47%)

Query: 108 RGAKPQSREPATAAQFNVWFQNARAKWRRMVTKQENKMSDKCSPDG 153
           R ++  S+   T  Q  +WFQN R KW++   +   K S   S  G
Sbjct: 164 RRSEMASQLNLTERQVKIWFQNRRMKWKKCNAQALTKTSKSPSQGG 209


>SB_10406| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 268

 Score = 31.1 bits (67), Expect = 0.61
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 5/61 (8%)

Query: 90  KRVVEVFKEDGASASRCRRGAKPQSRE-PATAAQFNVWFQNARAKWRRMVTKQENKMSDK 148
           K+++E+ KE   +   C    +  S+    T  Q  +WFQN R KW+    K E + ++ 
Sbjct: 180 KQLLELEKEFHFNKYLCSSRRREISKALQLTERQVKIWFQNRRMKWK----KDEKQKTED 235

Query: 149 C 149
           C
Sbjct: 236 C 236


>SB_10405| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 368

 Score = 31.1 bits (67), Expect = 0.61
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 5/61 (8%)

Query: 90  KRVVEVFKEDGASASRCRRGAKPQSRE-PATAAQFNVWFQNARAKWRRMVTKQENKMSDK 148
           K+++E+ KE   +   C    +  S+    T  Q  +WFQN R KW+    K E + ++ 
Sbjct: 90  KQLLELEKEFHFNKYLCSSRRREISKALQLTERQVKIWFQNRRMKWK----KDEKQKTED 145

Query: 149 C 149
           C
Sbjct: 146 C 146


>SB_48630| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 228

 Score = 30.7 bits (66), Expect = 0.81
 Identities = 11/19 (57%), Positives = 13/19 (68%)

Query: 119 TAAQFNVWFQNARAKWRRM 137
           T  Q  VWFQN R KW+R+
Sbjct: 182 TERQVKVWFQNRRMKWKRV 200


>SB_15| Best HMM Match : Homeobox (HMM E-Value=4.1e-30)
          Length = 287

 Score = 30.7 bits (66), Expect = 0.81
 Identities = 11/18 (61%), Positives = 12/18 (66%)

Query: 119 TAAQFNVWFQNARAKWRR 136
           T  Q  VWFQN R KWR+
Sbjct: 251 TETQVKVWFQNRRIKWRK 268


>SB_49708| Best HMM Match : Homeobox (HMM E-Value=8.1e-30)
          Length = 197

 Score = 30.7 bits (66), Expect = 0.81
 Identities = 10/21 (47%), Positives = 14/21 (66%)

Query: 122 QFNVWFQNARAKWRRMVTKQE 142
           Q  VWFQN R KW+R   +++
Sbjct: 134 QIKVWFQNRRTKWKRQQAEEK 154


>SB_22062| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 275

 Score = 30.7 bits (66), Expect = 0.81
 Identities = 11/24 (45%), Positives = 13/24 (54%)

Query: 122 QFNVWFQNARAKWRRMVTKQENKM 145
           Q  VWFQN R KW+R   +    M
Sbjct: 175 QVKVWFQNRRTKWKRQALEGNTNM 198


>SB_18749| Best HMM Match : Homeobox (HMM E-Value=6.1e-28)
          Length = 222

 Score = 30.7 bits (66), Expect = 0.81
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 3/43 (6%)

Query: 119 TAAQFNVWFQNARAKWRRM---VTKQENKMSDKCSPDGSLEMD 158
           T  Q  +WFQN R KW++    + +  N  SD+   +   E D
Sbjct: 149 TETQVKIWFQNRRTKWKKQEKEINEDANHNSDEQRTECGNESD 191


>SB_29287| Best HMM Match : Homeobox (HMM E-Value=1.4e-25)
          Length = 207

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)

Query: 122 QFNVWFQNARAKWRRMVTKQENKMSDKCSPD 152
           Q  VWFQN R KWR+    +E+  S    PD
Sbjct: 174 QVKVWFQNRRMKWRQ--DARESVTSTNTEPD 202


>SB_16448| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 307

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 10/18 (55%), Positives = 14/18 (77%)

Query: 119 TAAQFNVWFQNARAKWRR 136
           T ++  VWFQN RAKW++
Sbjct: 130 TESRVQVWFQNRRAKWKK 147


>SB_8992| Best HMM Match : Homeobox (HMM E-Value=1.4e-25)
          Length = 156

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)

Query: 122 QFNVWFQNARAKWRRMVTKQENKMSDKCSPD 152
           Q  VWFQN R KWR+    +E+  S    PD
Sbjct: 123 QVKVWFQNRRMKWRQ--DARESVTSTNTEPD 151


>SB_58034| Best HMM Match : VWA (HMM E-Value=0)
          Length = 1203

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 88   QMKRVVEVFKEDGASASRCRRGAKPQSREPATAAQFNVWFQNARAKWRR 136
            Q+ R+ + F+E     +  +R    +  E  T  Q   WFQN R KWR+
Sbjct: 1027 QLSRLEKEFEEK-RYLTETKRAELSKDLE-MTETQVKTWFQNRRTKWRK 1073



 Score = 29.5 bits (63), Expect = 1.9
 Identities = 10/18 (55%), Positives = 11/18 (61%)

Query: 119  TAAQFNVWFQNARAKWRR 136
            T  Q   WFQN R KWR+
Sbjct: 1155 TETQVKTWFQNRRTKWRK 1172


>SB_10426| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 318

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 11/81 (13%)

Query: 121 AQFNVWFQNARAKW----RRMVTKQENKMS--DKCSPDGSLEMDMYHGPMGSIQSLP--P 172
           A+  VWF+N RAK+    RR +T +   ++   K      L   MY+       S P   
Sbjct: 109 ARIQVWFKNRRAKYRKDQRRSLTSEREHLASIQKQDEAAGLMAPMYYQQAHMSHSRPYWN 168

Query: 173 HSPPYSVMGGPP--SPNSMEC 191
           H+ P   +  PP  +PN M C
Sbjct: 169 HNVPSDWLADPPIITPN-MSC 188


>SB_34509| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 212

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)

Query: 125 VWFQNARAKWRRMVTKQENKMSDKCSPDGSLE 156
           VWF+N RAKWR+   K+E   S K + +  L+
Sbjct: 120 VWFKNRRAKWRKQ--KREAVDSKKANEEDLLQ 149


>SB_53611| Best HMM Match : Homeobox (HMM E-Value=1.2e-25)
          Length = 389

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 11/18 (61%), Positives = 12/18 (66%)

Query: 119 TAAQFNVWFQNARAKWRR 136
           T  Q  VWFQN R KWR+
Sbjct: 354 TDNQVKVWFQNRRMKWRQ 371


>SB_42639| Best HMM Match : Homeobox (HMM E-Value=1e-26)
          Length = 225

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)

Query: 88  QMKRVVEVFKEDGASASRCRRGAKPQSREPATAAQFNVWFQNARAKWRRMVT 139
           Q+K + E F+E     +   R +  +S    T  Q   WFQN R KW++ ++
Sbjct: 110 QLKSLEEKFQEK-KYLTISERNSLAKSMH-LTNTQVKTWFQNRRTKWKKQMS 159


>SB_34953| Best HMM Match : Homeobox (HMM E-Value=1e-25)
          Length = 200

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 10/18 (55%), Positives = 11/18 (61%)

Query: 119 TAAQFNVWFQNARAKWRR 136
           T  Q   WFQN R KW+R
Sbjct: 136 TNRQIKTWFQNRRTKWKR 153


>SB_29536| Best HMM Match : Homeobox (HMM E-Value=2.6e-30)
          Length = 179

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 12/27 (44%), Positives = 15/27 (55%)

Query: 122 QFNVWFQNARAKWRRMVTKQENKMSDK 148
           Q  VWFQN R K++R   K  + M  K
Sbjct: 153 QVKVWFQNRRMKYKRERAKGRSSMDSK 179


>SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26)
          Length = 1064

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)

Query: 88  QMKRVVEVFKEDGASASRCRRGAKPQSREPATAAQFNVWFQNARAKWRRMVT 139
           Q+K + E F+E     +   R +  +S    T  Q   WFQN R KW++ ++
Sbjct: 949 QLKSLEEKFQEK-KYLTISERNSLAKSMH-LTNTQVKTWFQNRRTKWKKQMS 998


>SB_8578| Best HMM Match : DUF807 (HMM E-Value=6.7)
          Length = 139

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 10/18 (55%), Positives = 13/18 (72%)

Query: 125 VWFQNARAKWRRMVTKQE 142
           VWFQN RA+WR+   K +
Sbjct: 1   VWFQNRRARWRKSEIKNK 18


>SB_8063| Best HMM Match : Homeobox (HMM E-Value=8.5e-24)
          Length = 963

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 10/23 (43%), Positives = 17/23 (73%)

Query: 119 TAAQFNVWFQNARAKWRRMVTKQ 141
           T AQ  +WFQN R K+R+ ++++
Sbjct: 131 TPAQVKIWFQNHRYKYRKQMSEK 153


>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
          Length = 382

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 5/35 (14%)

Query: 163 PMGSIQSLPPHSPPYSV-----MGGPPSPNSMECP 192
           P+ +  SLPP  PP  +     MG PP P+SM  P
Sbjct: 216 PIQTSTSLPPMIPPVGMLGHPPMGAPPPPHSMPPP 250


>SB_8774| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 223

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)

Query: 119 TAAQFNVWFQNARAKWRR 136
           T  Q  +WFQN R KW++
Sbjct: 188 TERQVKIWFQNRRMKWKK 205


>SB_14695| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 207

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 24/99 (24%), Positives = 37/99 (37%), Gaps = 6/99 (6%)

Query: 94  EVFKEDGASASRCRRGAKPQSREPATAAQFNVWFQNARAKWRRM---VTKQENKM---SD 147
           ++F E G       R    +  + A   Q  +WFQN R K +R     T+   K+   + 
Sbjct: 57  DLFAERGEPVGARVRCTAVRIGQGARDDQVKIWFQNRRMKRKRKRAEETEYYTKLALYNT 116

Query: 148 KCSPDGSLEMDMYHGPMGSIQSLPPHSPPYSVMGGPPSP 186
              P  +     Y GP+  +        P+   G PP P
Sbjct: 117 AIGPQPTQGFRPYPGPLPVLSPQVYRGYPFQYPGTPPPP 155


>SB_34627| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1925

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 13/50 (26%), Positives = 23/50 (46%)

Query: 138  VTKQENKMSDKCSPDGSLEMDMYHGPMGSIQSLPPHSPPYSVMGGPPSPN 187
            +TK  +    + SP+  +  + +H    S+ + P  + P      PPSPN
Sbjct: 1476 ITKHSHYQQHQTSPNPVITNNTHHHQTQSLTTTPNITKPSHYQQHPPSPN 1525


>SB_32283| Best HMM Match : Homeobox (HMM E-Value=4.5e-20)
          Length = 398

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 10/78 (12%)

Query: 119 TAAQFNVWFQNARAKWRRMVTKQE-----NKMSDKCSPDGSLEMDMYHGPMGSIQS---- 169
           T  Q   WFQN R K +R   +Q      +K++   S   +++   YH  +G++ +    
Sbjct: 280 TDQQVKTWFQNRRMKVKRKRQEQMHQDYISKLAYIHSVANNVKPQRYHDYLGTMYATGYP 339

Query: 170 LPPHSPPYSVMG-GPPSP 186
           + PHS P+     GP +P
Sbjct: 340 IMPHSNPFQQPRLGPMAP 357


>SB_7446| Best HMM Match : SH2 (HMM E-Value=2.7e-22)
          Length = 699

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 127 FQNARAKWRRMVTKQ-ENKMSDKCSPDGSLEMDMYHGPM 164
           +   +A+  +M  K+ +N +  +  PD  ++ D YHGP+
Sbjct: 416 YAKKKAEKEKMSLKEVQNALPPQAPPDSLVQKDWYHGPI 454


>SB_29192| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 695

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)

Query: 122 QFNVWFQNARAKWRR 136
           Q  +WFQN R KW++
Sbjct: 344 QVKIWFQNRRVKWKK 358


>SB_49275| Best HMM Match : Homeobox (HMM E-Value=2.8e-27)
          Length = 116

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 88  QMKRVVEVFKEDGASASRCRRGAKPQSREPATAAQFNVWFQNARAKWRRMVTKQENKM 145
           Q++R+ + F+     A   RR          T  Q  VWFQN R ++R+   K  N +
Sbjct: 61  QLQRLEKAFERQQYVAGEERRQLATGLN--LTETQVKVWFQNRRIRFRKHRLKTANAL 116


>SB_22870| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 225

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 119 TAAQFNVWFQNARAKWRRMVTKQ 141
           T  Q  +WFQN RAK +R+   Q
Sbjct: 156 TETQVKIWFQNRRAKDKRLEKAQ 178


>SB_50832| Best HMM Match : Homeobox (HMM E-Value=8.7e-23)
          Length = 285

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 88  QMKRVVEVFKEDGASASRCRRGAKPQSREPATAAQFNVWFQNARAKWRR 136
           Q++++ + FK D   +++ R       +   T  Q   W+QN R KW++
Sbjct: 215 QLQKLEDRFKHDKYLSTQDRNEFARSLQ--LTPLQLKTWYQNRRMKWKK 261


>SB_37079| Best HMM Match : Homeobox (HMM E-Value=1.2e-28)
          Length = 246

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 5/61 (8%)

Query: 121 AQFNVWFQNARAKWRRM---VTKQENKMSDKCSPDGSLEMDMYHGPMGS--IQSLPPHSP 175
           ++  VWF+N RAK R++    +KQ  K   + SP    E      P  S  + S P   P
Sbjct: 100 SRVQVWFKNRRAKLRQLSKGQSKQSPKPVKRKSPSPEAEQHKPATPPQSHYVNSNPWQQP 159

Query: 176 P 176
           P
Sbjct: 160 P 160


>SB_37025| Best HMM Match : Homeobox (HMM E-Value=1.3e-16)
          Length = 154

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 6/74 (8%)

Query: 119 TAAQFNVWFQNARAKWRRM---VTKQENKM---SDKCSPDGSLEMDMYHGPMGSIQSLPP 172
           T  Q  +WFQN R K +R     T+   K+   +    P  +     Y GP  ++     
Sbjct: 29  TDDQVKIWFQNRRMKRKRKRAEETEYYTKLALYNTAIGPQPTQGFRPYPGPPPALSPQVY 88

Query: 173 HSPPYSVMGGPPSP 186
              P+   G PP P
Sbjct: 89  RGYPFQYPGTPPPP 102


>SB_36166| Best HMM Match : Homeobox (HMM E-Value=2.6e-28)
          Length = 209

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 16/30 (53%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 121 AQFNVWFQNARAKWRRMVTKQENKMSDKCS 150
           AQ   WFQN RAK RR V  +E K   K S
Sbjct: 165 AQIITWFQNRRAKMRRDV--EELKSDVKAS 192


>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 550

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)

Query: 157 MDMYHGPMGSIQSLPPHSPPYSVMGGPPSPNSMECP 192
           M MY  P G     PP  PP     GPP P  M  P
Sbjct: 473 MGMYPPPRGFPP--PPFGPPPPFYRGPPPPRGMPPP 506


>SB_24287| Best HMM Match : Homeobox (HMM E-Value=9e-28)
          Length = 561

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 122 QFNVWFQNARAKWRRMVTKQ 141
           Q   WFQN R KW++ +  +
Sbjct: 476 QVKTWFQNRRTKWKKQMAPE 495


>SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1929

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 144  KMSDKCSPDGSLEMDMYHGPM--GSIQSLPPHSPPYSVMGGPPSP 186
            K++D    +GSL     H      + Q+ PP  PP   +  PP+P
Sbjct: 1137 KLNDDNLHEGSLNSGNEHSTQVRNTTQAKPPQPPPVPSVQAPPAP 1181


>SB_10407| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 231

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 13/109 (11%)

Query: 79  YEERFHALRQMKRVVEVFKEDGASASRC-RRGAKPQSREPATAAQFNVWFQNARAKWRRM 137
           + +R+      ++++E+ KE   +   C  R  +  +    T  Q  VWFQN R K    
Sbjct: 98  HTKRYRTSYTNRQLLELEKEFHYNKYLCGTRRRELANAMKLTERQVKVWFQNRRMK---- 153

Query: 138 VTKQENKMSDKCSPDGSLEMDMYHGPMGSIQSLPPHSPPYSVM--GGPP 184
           + K E +  D   P    + D+    M S+  LP   P Y+    G PP
Sbjct: 154 LKKDEKQKED--GPSAFPDYDV----MKSLPRLPRLLPTYATQTEGYPP 196


>SB_3037| Best HMM Match : Homeobox (HMM E-Value=4.3e-27)
          Length = 308

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 9/25 (36%), Positives = 16/25 (64%)

Query: 119 TAAQFNVWFQNARAKWRRMVTKQEN 143
           T  Q  +WFQN R+K+++ +   E+
Sbjct: 214 TQTQVKIWFQNRRSKFKKTLKVSED 238


>SB_49289| Best HMM Match : Homeobox (HMM E-Value=6e-30)
          Length = 285

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 10/17 (58%), Positives = 13/17 (76%)

Query: 121 AQFNVWFQNARAKWRRM 137
           A+  +WFQN RAK RR+
Sbjct: 158 ARVQIWFQNRRAKSRRL 174


>SB_41873| Best HMM Match : Homeobox (HMM E-Value=2.3e-29)
          Length = 651

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 10/16 (62%), Positives = 12/16 (75%)

Query: 121 AQFNVWFQNARAKWRR 136
           AQ  VWFQN R K++R
Sbjct: 586 AQVKVWFQNRRTKFKR 601


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.129    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,178,939
Number of Sequences: 59808
Number of extensions: 232692
Number of successful extensions: 815
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 746
Number of HSP's gapped (non-prelim): 78
length of query: 192
length of database: 16,821,457
effective HSP length: 78
effective length of query: 114
effective length of database: 12,156,433
effective search space: 1385833362
effective search space used: 1385833362
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)

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