Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002126-TA|BGIBMGA002126-PA|IPR009057|Homeodomain-like
(192 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 33 0.002
M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 29 0.022
M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee homeobox-... 29 0.029
M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee homeobox-... 29 0.029
AB248729-1|BAF02606.1| 43|Apis mellifera distal-less protein. 29 0.038
M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee homeobox-... 28 0.050
M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee homeobox-... 28 0.050
M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee homeobox-... 27 0.15
M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-... 24 1.1
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 2.5
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 21 7.6
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 32.7 bits (71), Expect = 0.002
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
Query: 119 TAAQFNVWFQNARAKWRRMVTKQENKMSDKCSPDGSLEMDMYHGPMG 165
T Q +WFQN R KW+ K+ S DG E+ P G
Sbjct: 310 TERQIKIWFQNRRMKWK----KENKSKGTPGSGDGDTEISPQTSPQG 352
>M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H40. ).
Length = 74
Score = 29.5 bits (63), Expect = 0.022
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 119 TAAQFNVWFQNARAKWRR 136
T Q +WFQN R KW++
Sbjct: 48 TETQVKIWFQNRRTKWKK 65
>M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H90. ).
Length = 74
Score = 29.1 bits (62), Expect = 0.029
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 119 TAAQFNVWFQNARAKWRR 136
T Q +WFQN R KW++
Sbjct: 48 TERQIKIWFQNRRMKWKK 65
>M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H55. ).
Length = 86
Score = 29.1 bits (62), Expect = 0.029
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 119 TAAQFNVWFQNARAKWRR 136
T Q +WFQN R KW++
Sbjct: 48 TERQIKIWFQNRRMKWKK 65
>AB248729-1|BAF02606.1| 43|Apis mellifera distal-less protein.
Length = 43
Score = 28.7 bits (61), Expect = 0.038
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 119 TAAQFNVWFQNARAKWRRMV 138
T Q +WFQN R+K+++M+
Sbjct: 21 TQTQVKIWFQNRRSKYKKMM 40
>M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H17. ).
Length = 79
Score = 28.3 bits (60), Expect = 0.050
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 119 TAAQFNVWFQNARAKWRRMVTKQENKM 145
T Q +WFQN RAK +R+ + K+
Sbjct: 49 TETQVKIWFQNRRAKAKRLQEAEIEKL 75
>M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E30. ).
Length = 109
Score = 28.3 bits (60), Expect = 0.050
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 119 TAAQFNVWFQNARAKWRRMVTKQENKMS 146
T AQ +WFQN RAK ++ + Q+N ++
Sbjct: 60 TEAQIKIWFQNKRAKIKK-ASGQKNPLA 86
>M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E60. ).
Length = 109
Score = 26.6 bits (56), Expect = 0.15
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 121 AQFNVWFQNARAKWRRMVTKQENKMS 146
AQ +WFQN RAK ++ + Q+N ++
Sbjct: 62 AQIKIWFQNKRAKIKK-ASGQKNPLA 86
>M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H15. ).
Length = 74
Score = 23.8 bits (49), Expect = 1.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 119 TAAQFNVWFQNARAKWRR 136
T Q +WFQN R K ++
Sbjct: 48 TERQIKIWFQNRRMKLKK 65
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.6 bits (46), Expect = 2.5
Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 165 GSIQSLPPHSP--PYSVMGGPPSPNSMECP 192
G+ + P P P++ GG P PN ++ P
Sbjct: 1118 GTADNKPQLKPQKPFTSPGGIPGPNGIKMP 1147
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.0 bits (42), Expect = 7.6
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 47 RATINRAVDCPTFIFHSDERLNLHSGTQPTSAYEER 82
R +++ V+ + I HS+ N +S T + EE+
Sbjct: 732 RDSLSPRVENRSAIVHSEASANANSSTSSEESREEK 767
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.318 0.129 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,266
Number of Sequences: 429
Number of extensions: 1910
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 11
length of query: 192
length of database: 140,377
effective HSP length: 54
effective length of query: 138
effective length of database: 117,211
effective search space: 16175118
effective search space used: 16175118
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 42 (21.0 bits)
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