Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002125-TA|BGIBMGA002125-PA|IPR001356|Homeobox,
IPR009057|Homeodomain-like
(65 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U11701-1|AAB08752.1| 423|Homo sapiens LIM-homeobox domain prote... 92 3e-19
BC131622-1|AAI31623.1| 397|Homo sapiens LIM homeobox 9 protein. 92 3e-19
BC112185-1|AAI12186.1| 406|Homo sapiens LIM homeobox protein 2 ... 92 3e-19
BC093662-1|AAH93662.1| 406|Homo sapiens LIM homeobox 2 protein. 92 3e-19
AY273889-1|AAP32471.2| 397|Homo sapiens LIM-homeobox 9 protein ... 92 3e-19
AL590115-6|CAH71763.1| 397|Homo sapiens LIM homeobox 9 protein. 92 3e-19
AL590115-3|CAH71760.1| 388|Homo sapiens LIM homeobox 9 protein. 92 3e-19
AK094511-1|BAC04371.1| 397|Homo sapiens protein ( Homo sapiens ... 92 3e-19
AJ277916-1|CAB98128.1| 257|Homo sapiens LIM-homeobox 9 protein. 92 3e-19
AJ277915-1|CAB97493.1| 388|Homo sapiens LIM-homeobox 9 protein. 92 3e-19
AF124735-1|AAD20013.1| 389|Homo sapiens LIM-homeodomain protein... 92 3e-19
AL590115-7|CAH71764.1| 330|Homo sapiens LIM homeobox 9 protein. 90 9e-19
AL590115-4|CAH71761.1| 321|Homo sapiens LIM homeobox 9 protein. 90 9e-19
BC040321-1|AAH40321.1| 356|Homo sapiens LIM homeobox 8 protein. 50 9e-07
BC103938-1|AAI03939.1| 362|Homo sapiens LIM homeobox 6 protein. 49 3e-06
BC103937-1|AAI03938.1| 363|Homo sapiens LIM homeobox 6 protein. 49 3e-06
BC103936-1|AAI03937.1| 348|Homo sapiens LIM homeobox 6 protein. 49 3e-06
AL162424-3|CAI14704.1| 348|Homo sapiens LIM homeobox 6 protein. 49 3e-06
AL162424-2|CAI14703.1| 363|Homo sapiens LIM homeobox 6 protein. 49 3e-06
AB031042-1|BAA83423.1| 348|Homo sapiens LIM-homeodomain (LHX) p... 49 3e-06
AB031041-1|BAA83422.1| 363|Homo sapiens LIM-homeodomain (LHX) p... 49 3e-06
L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain p... 44 8e-05
D10250-1|BAA01095.1| 2783|Homo sapiens alpha-fetoprotein enhance... 44 8e-05
AC004943-1|AAC79153.1| 2553|Homo sapiens unknown protein. 44 8e-05
BC111936-1|AAI11937.1| 406|Homo sapiens LIM homeobox 1 protein. 40 0.002
BC109230-1|AAI09231.1| 402|Homo sapiens LIM homeobox 5 protein. 40 0.002
BC101674-1|AAI01675.1| 406|Homo sapiens LIM homeobox 1 protein. 40 0.002
BC020470-1|AAH20470.1| 260|Homo sapiens LHX1 protein protein. 40 0.002
AF291181-1|AAG36963.1| 402|Homo sapiens LHX5 protein protein. 40 0.002
AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain... 39 0.003
AB083343-1|BAE96598.1| 3599|Homo sapiens zinc-finger homeodomain... 39 0.003
U14755-1|AAA21644.1| 404|Homo sapiens LIM domain transcription ... 38 0.007
U07559-1|AAA81946.1| 346|Homo sapiens ISL-1 protein. 38 0.007
S70721-1|AAD14064.1| 349|Homo sapiens isl-1 protein. 38 0.007
BC031213-1|AAH31213.1| 349|Homo sapiens ISL1 transcription fact... 38 0.007
BC012136-1|AAH12136.1| 359|Homo sapiens ISL2 transcription fact... 38 0.007
BC011967-1|AAH11967.1| 359|Homo sapiens ISL2 transcription fact... 38 0.007
AK131462-1|BAD18607.1| 1103|Homo sapiens protein ( Homo sapiens ... 36 0.016
AK131399-1|BAD18546.1| 907|Homo sapiens protein ( Homo sapiens ... 36 0.016
AB051549-1|BAB21853.1| 1460|Homo sapiens KIAA1762 protein protein. 36 0.027
DQ854808-1|ABI23974.1| 239|Homo sapiens visual system homeobox ... 34 0.083
AL138781-3|CAI16879.1| 397|Homo sapiens LIM homeobox 3 protein. 34 0.083
AL138781-2|CAI16878.1| 402|Homo sapiens LIM homeobox 3 protein. 34 0.083
AF367089-1|AAL26314.1| 397|Homo sapiens LIM homeobox protein 3 ... 34 0.083
AF251034-1|AAF99657.1| 239|Homo sapiens homeodomain protein RIN... 34 0.083
AF211950-1|AAG10399.1| 397|Homo sapiens lim-homeobox transcript... 34 0.083
AF156889-1|AAF36809.1| 402|Homo sapiens LIM homeobox protein 3 ... 34 0.083
AF156888-1|AAF36808.1| 397|Homo sapiens LIM homeobox protein 3 ... 34 0.083
AF096169-1|AAF17292.1| 370|Homo sapiens LHX3 protein protein. 34 0.083
AF096168-1|AAF17291.1| 370|Homo sapiens LHX3 protein protein. 34 0.083
DQ854812-1|ABI23978.1| 301|Homo sapiens visual system homeobox ... 33 0.11
DQ854809-1|ABI23975.1| 280|Homo sapiens visual system homeobox ... 33 0.11
DQ854807-1|ABI23973.1| 365|Homo sapiens visual system homeobox ... 33 0.11
BC126228-1|AAI26229.1| 365|Homo sapiens visual system homeobox ... 33 0.11
AL080312-3|CAI18918.1| 365|Homo sapiens visual system homeobox ... 33 0.11
AF251033-1|AAF99656.1| 365|Homo sapiens homeodomain protein RIN... 33 0.11
AF176797-1|AAF37425.2| 365|Homo sapiens transcription factor VS... 33 0.11
X71488-1|CAA50589.1| 264|Homo sapiens Brn-3b protein. 33 0.15
U10061-1|AAA57160.1| 338|Homo sapiens POU domain factor protein. 33 0.15
U06233-1|AAA16509.1| 410|Homo sapiens Brn-3b protein. 33 0.15
L20434-1|AAA36393.1| 118|Homo sapiens POU domain protein protein. 33 0.15
BC112207-1|AAI12208.1| 338|Homo sapiens POU domain, class 4, tr... 33 0.15
BC104923-1|AAI04924.1| 338|Homo sapiens POU domain, class 4, tr... 33 0.15
AF044575-1|AAC06203.1| 338|Homo sapiens transcription factor PO... 33 0.15
Y11536-1|CAA72299.1| 292|Homo sapiens SHOXa protein protein. 33 0.19
Y11535-1|CAA72298.1| 225|Homo sapiens SHOXb protein protein. 33 0.19
X64624-1|CAA45907.1| 331|Homo sapiens RDC-1 protein. 33 0.19
U89331-1|AAC18820.1| 292|Homo sapiens pseudoautosomal homeodoma... 33 0.19
U10063-1|AAA57161.1| 423|Homo sapiens POU domain factor protein. 33 0.19
L20433-1|AAA65605.1| 420|Homo sapiens octamer binding transcrip... 33 0.19
BX004827-2|CAI41572.1| 225|Homo sapiens short stature homeobox ... 33 0.19
BX004827-1|CAI41571.1| 292|Homo sapiens short stature homeobox ... 33 0.19
BC008829-1|AAH08829.1| 355|Homo sapiens SHOX2 protein protein. 33 0.19
AL445209-3|CAI15184.1| 419|Homo sapiens POU domain, class 4, tr... 33 0.19
AJ002368-1|CAA05342.1| 190|Homo sapiens homeobox protein SHOTb ... 33 0.19
AJ002367-1|CAA05341.1| 251|Homo sapiens homeobox protein SHOTa ... 33 0.19
AF022654-1|AAC39662.1| 190|Homo sapiens homeodomain protein pro... 33 0.19
BC032512-1|AAH32512.1| 184|Homo sapiens retina and anterior neu... 32 0.25
BC018709-1|AAH18709.1| 184|Homo sapiens retina and anterior neu... 32 0.25
BC011759-1|AAH11759.1| 390|Homo sapiens LIM homeobox 4 protein. 32 0.25
BC007284-1|AAH07284.1| 184|Homo sapiens RAXL1 protein protein. 32 0.25
AY628411-1|AAT46026.1| 292|Homo sapiens short stature homeobox ... 32 0.25
AY211277-1|AAP41547.1| 184|Homo sapiens Q50-type retinal homeob... 32 0.25
AY053457-1|AAL07260.1| 390|Homo sapiens LIM homeodomain protein... 32 0.25
AL139141-1|CAI19364.1| 390|Homo sapiens LIM homeobox 4 protein. 32 0.25
AF405430-1|AAM91896.1| 390|Homo sapiens LIM homeobox protein 4 ... 32 0.25
AF282899-1|AAK69169.1| 367|Homo sapiens LIM homeobox protein pr... 32 0.25
AF251562-1|AAM19349.1| 239|Homo sapiens LIM homeobox protein pr... 32 0.25
AF179849-1|AAK70923.1| 390|Homo sapiens LIM homeobox protein 4 ... 32 0.25
AB055703-1|BAB62817.1| 367|Homo sapiens LIM homeobox 4 protein. 32 0.25
AB037683-1|BAC01272.1| 240|Homo sapiens LIM homeobox protein 4 ... 32 0.25
Z95332-5|CAG38363.1| 436|Homo sapiens paired box gene 6 (anirid... 32 0.34
Z95332-4|CAG38362.1| 422|Homo sapiens paired box gene 6 (anirid... 32 0.34
Z83853-1|CAI18752.1| 245|Homo sapiens protein ( Human DNA seque... 32 0.34
Z83307-5|CAG38086.1| 422|Homo sapiens paired box gene 6 (anirid... 32 0.34
Z83307-4|CAG38087.1| 436|Homo sapiens paired box gene 6 (anirid... 32 0.34
M93650-1|AAA36416.1| 422|Homo sapiens paired-box protein protein. 32 0.34
M77844-2|AAA59963.1| 422|Homo sapiens oculorhombin protein. 32 0.34
M77844-1|AAA59962.1| 422|Homo sapiens oculorhombin protein. 32 0.34
DQ854811-1|ABI23977.1| 236|Homo sapiens visual system homeobox ... 32 0.34
DQ854810-1|ABI23976.1| 218|Homo sapiens visual system homeobox ... 32 0.34
BC113633-1|AAI13634.1| 245|Homo sapiens intestine-specific home... 32 0.34
BC112212-1|AAI12213.1| 245|Homo sapiens intestine-specific home... 32 0.34
BC011953-1|AAH11953.1| 422|Homo sapiens paired box gene 6 (anir... 32 0.34
AY707088-1|AAU12168.1| 422|Homo sapiens paired box gene 6 isofo... 32 0.34
AY047583-1|AAK95849.1| 422|Homo sapiens paired box protein PAX6... 32 0.34
AL024494-1|CAI19818.1| 245|Homo sapiens protein ( Human DNA seq... 32 0.34
AJ404888-1|CAC15060.1| 411|Homo sapiens homeodomain transcripti... 32 0.34
AJ279074-1|CAC15120.1| 411|Homo sapiens homeodomain transcripti... 32 0.34
AF308825-1|AAK38835.1| 411|Homo sapiens aristaless-like homeobo... 32 0.34
AF294629-1|AAG23961.1| 410|Homo sapiens aristaless-like 4 protein. 32 0.34
AF115392-1|AAD23438.1| 346|Homo sapiens retinal homeobox protei... 32 0.34
AB209177-1|BAD92414.1| 385|Homo sapiens paired box gene 6 isofo... 32 0.34
AB058691-1|BAB47417.1| 413|Homo sapiens KIAA1788 protein protein. 32 0.34
BC128153-1|AAI28154.1| 361|Homo sapiens ceh-10 homeodomain cont... 31 0.59
AY336059-1|AAQ01593.1| 361|Homo sapiens ceh-10 homeodomain cont... 31 0.59
Z35141-1|CAA84513.1| 467|Homo sapiens PAX7 paired box containin... 31 0.78
X96744-2|CAA65522.1| 520|Homo sapiens PAX7 protein. 31 0.78
X96744-1|CAA65521.1| 518|Homo sapiens PAX7 protein. 31 0.78
X96743-1|CAA65520.1| 520|Homo sapiens paired box containing tra... 31 0.78
DQ322591-1|ABC48797.1| 505|Homo sapiens PAX7 transcriptional fa... 31 0.78
BC127102-1|AAI27103.1| 1214|Homo sapiens zinc finger E-box bindi... 31 0.78
BC127101-1|AAI27102.1| 1213|Homo sapiens zinc finger E-box bindi... 31 0.78
BC121166-1|AAI21167.1| 518|Homo sapiens paired box gene 7 protein. 31 0.78
BC121165-1|AAI21166.1| 518|Homo sapiens paired box gene 7 protein. 31 0.78
AY029472-1|AAK52081.1| 1214|Homo sapiens smad-interacting protei... 31 0.78
AL021528-1|CAA16432.1| 520|Homo sapiens paired box gene 7 protein. 31 0.78
AC010130-1|AAX93276.1| 1079|Homo sapiens unknown protein. 31 0.78
AB056507-1|BAB40819.1| 1214|Homo sapiens Smad interacting protei... 31 0.78
AB011141-1|BAA25495.2| 1318|Homo sapiens KIAA0569 protein protein. 31 0.78
U19969-1|AAA62155.1| 1154|Homo sapiens ZEB protein. 30 1.0
U12170-1|AAA20602.1| 1124|Homo sapiens zinc finger homeodomain p... 30 1.0
D15050-1|BAA03646.1| 1124|Homo sapiens transcription factor AREB... 30 1.0
BC112392-1|AAI12393.1| 1125|Homo sapiens zinc finger E-box bindi... 30 1.0
BC069076-1|AAH69076.1| 226|Homo sapiens prophet of Pit1, paired... 30 1.0
BC009572-1|AAH09572.1| 1059|Homo sapiens Unknown (protein for IM... 30 1.0
AL355148-2|CAI15108.1| 1124|Homo sapiens transcription factor 8 ... 30 1.0
AL355148-1|CAI15107.1| 1104|Homo sapiens transcription factor 8 ... 30 1.0
AL161935-2|CAH74131.1| 1104|Homo sapiens transcription factor 8 ... 30 1.0
AL161935-1|CAH74132.1| 1124|Homo sapiens transcription factor 8 ... 30 1.0
AL158080-2|CAI17319.1| 1104|Homo sapiens transcription factor 8 ... 30 1.0
AL158080-1|CAI17320.1| 1124|Homo sapiens transcription factor 8 ... 30 1.0
AL137797-2|CAI19184.1| 377|Homo sapiens diencephalon/mesencepha... 30 1.0
AL137797-1|CAI19185.1| 382|Homo sapiens diencephalon/mesencepha... 30 1.0
AL117340-2|CAI12550.1| 1124|Homo sapiens transcription factor 8 ... 30 1.0
AL117340-1|CAI12549.1| 1104|Homo sapiens transcription factor 8 ... 30 1.0
AK091478-1|BAC03673.1| 1104|Homo sapiens protein ( Homo sapiens ... 30 1.0
AF398528-1|AAM90590.1| 382|Homo sapiens homeoprotein MBX-L prot... 30 1.0
AF398527-1|AAM90589.1| 377|Homo sapiens homeoprotein MBX-S prot... 30 1.0
AF076215-1|AAC77454.1| 226|Homo sapiens prophet of Pit1 protein. 30 1.0
AF076214-1|AAC77453.1| 226|Homo sapiens prophet of Pit1 protein. 30 1.0
AF041141-1|AAC27900.1| 226|Homo sapiens pituitary specific home... 30 1.0
AB037699-1|BAC00920.1| 382|Homo sapiens PaxB protein. 30 1.0
U81600-1|AAB39864.1| 164|Homo sapiens paired-like homeodomain p... 30 1.4
D82344-1|BAA11555.1| 314|Homo sapiens NBPhox protein. 30 1.4
BC113428-1|AAI13429.1| 343|Homo sapiens aristaless-like homeobo... 30 1.4
BC112007-1|AAI12008.1| 343|Homo sapiens ALX3 protein protein. 30 1.4
BC041564-1|AAH41564.1| 284|Homo sapiens paired-like (aristaless... 30 1.4
BC017199-1|AAH17199.1| 314|Homo sapiens paired-like homeobox 2b... 30 1.4
BC014645-1|AAH14645.1| 253|Homo sapiens paired related homeobox... 30 1.4
AY662674-1|AAV84357.1| 268|Homo sapiens predicted NUP98/PRRX2 f... 30 1.4
AL590369-7|CAI14511.1| 253|Homo sapiens paired related homeobox... 30 1.4
AL160006-1|CAI22714.1| 343|Homo sapiens aristaless-like homeobo... 30 1.4
AF117979-1|AAD26698.1| 314|Homo sapiens homeodomain transcripti... 30 1.4
AF061970-1|AAF17708.1| 253|Homo sapiens paired related homeobox... 30 1.4
AF022724-1|AAB82744.1| 284|Homo sapiens ARIX homeodomain protei... 30 1.4
AF008203-1|AAD01418.1| 343|Homo sapiens homeobox protein protein. 30 1.4
AB015671-1|BAA82670.1| 314|Homo sapiens NBPhox protein. 30 1.4
BT007364-1|AAP36028.1| 299|Homo sapiens cone-rod homeobox protein. 29 1.8
BC053672-1|AAH53672.1| 299|Homo sapiens CRX protein protein. 29 1.8
BC016664-1|AAH16664.1| 299|Homo sapiens CRX protein protein. 29 1.8
AF024711-1|AAB88418.1| 299|Homo sapiens cone rod homeobox prote... 29 1.8
M95929-1|AAA60085.1| 199|Homo sapiens homeobox protein protein. 29 2.4
BC074993-1|AAH74993.1| 245|Homo sapiens paired related homeobox... 29 2.4
U31986-1|AAB08960.1| 326|Homo sapiens Cart-1 protein. 28 4.1
U12259-1|AAA80574.1| 283|Homo sapiens paired box homeotic prote... 28 4.1
U02368-1|AAC50053.1| 836|Homo sapiens PAX3 protein-forkhead tra... 28 4.1
BC114363-1|AAI14364.1| 483|Homo sapiens paired box gene 3 (Waar... 28 4.1
BC101302-1|AAI01303.1| 483|Homo sapiens paired box gene 3 (Waar... 28 4.1
BC101301-1|AAI01302.1| 484|Homo sapiens paired box gene 3 (Waar... 28 4.1
BC101300-1|AAI01301.1| 483|Homo sapiens paired box gene 3 (Waar... 28 4.1
BC101299-1|AAI01300.1| 483|Homo sapiens paired box gene 3 (Waar... 28 4.1
BC010923-1|AAH10923.1| 326|Homo sapiens cartilage paired-class ... 28 4.1
AY633656-1|AAT47737.1| 850|Homo sapiens PAX3/NCOA1 fusion prote... 28 4.1
AY251280-1|AAP13873.1| 407|Homo sapiens paired box 3 splice var... 28 4.1
AY251279-1|AAP13872.1| 403|Homo sapiens paired box 3 splice var... 28 4.1
AJ558236-1|CAD90155.1| 326|Homo sapiens cartilage paired-class ... 28 4.1
U82811-1|AAB88275.1| 185|Homo sapiens HANF protein. 28 5.5
U65437-1|AAB39561.1| 79|Homo sapiens homeodomain-containing pr... 28 5.5
BC112089-1|AAI12090.1| 185|Homo sapiens HESX homeobox 1 protein. 28 5.5
BC093979-1|AAH93979.1| 185|Homo sapiens HESX homeobox 1 protein. 28 5.5
BC069515-1|AAH69515.1| 185|Homo sapiens HESX homeobox 1 protein. 28 5.5
BC007621-1|AAH07621.1| 354|Homo sapiens orthodenticle homeobox ... 28 5.5
AF059734-1|AAC24523.1| 185|Homo sapiens homeodomain transcripti... 28 5.5
AC009501-2|AAY24357.1| 354|Homo sapiens unknown protein. 28 5.5
BC068569-1|AAH68569.1| 969|Homo sapiens ZHX3 protein protein. 27 7.2
BC032579-1|AAH32579.1| 297|Homo sapiens orthodenticle homeobox ... 27 7.2
AY038071-1|AAK93901.1| 562|Homo sapiens aristaless-related home... 27 7.2
AL022394-6|CAI42887.1| 677|Homo sapiens zinc fingers and homeob... 27 7.2
AL022394-5|CAA18538.1| 956|Homo sapiens zinc fingers and homeob... 27 7.2
AF298117-1|AAG16243.1| 297|Homo sapiens homeobox protein OTX2 p... 27 7.2
AF093138-1|AAD31385.1| 289|Homo sapiens homeodomain protein OTX... 27 7.2
AB081948-1|BAC65211.1| 956|Homo sapiens transcription factor ZH... 27 7.2
AB007855-1|BAA23691.3| 1003|Homo sapiens KIAA0395 protein protein. 27 7.2
Z21967-1|CAA79978.1| 105|Homo sapiens mPOU homeobox protein pro... 27 9.6
Z21966-1|CAA79977.1| 301|Homo sapiens mPOU homeobox protein pro... 27 9.6
BC107090-1|AAI07091.1| 86|Homo sapiens POU6F1 protein protein. 27 9.6
BC074765-1|AAH74765.3| 301|Homo sapiens POU domain, class 6, tr... 27 9.6
BC051326-1|AAH51326.2| 301|Homo sapiens POU domain, class 6, tr... 27 9.6
>U11701-1|AAB08752.1| 423|Homo sapiens LIM-homeobox domain protein
protein.
Length = 423
Score = 91.9 bits (218), Expect = 3e-19
Identities = 42/44 (95%), Positives = 43/44 (97%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
MRTSFKHHQLRTMKSYFAINHNPDAKDLKQL+QKTGL KRVLQV
Sbjct: 267 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQV 310
>BC131622-1|AAI31623.1| 397|Homo sapiens LIM homeobox 9 protein.
Length = 397
Score = 91.9 bits (218), Expect = 3e-19
Identities = 42/44 (95%), Positives = 43/44 (97%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
MRTSFKHHQLRTMKSYFAINHNPDAKDLKQL+QKTGL KRVLQV
Sbjct: 270 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQV 313
>BC112185-1|AAI12186.1| 406|Homo sapiens LIM homeobox protein 2
protein.
Length = 406
Score = 91.9 bits (218), Expect = 3e-19
Identities = 42/44 (95%), Positives = 43/44 (97%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
MRTSFKHHQLRTMKSYFAINHNPDAKDLKQL+QKTGL KRVLQV
Sbjct: 269 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQV 312
>BC093662-1|AAH93662.1| 406|Homo sapiens LIM homeobox 2 protein.
Length = 406
Score = 91.9 bits (218), Expect = 3e-19
Identities = 42/44 (95%), Positives = 43/44 (97%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
MRTSFKHHQLRTMKSYFAINHNPDAKDLKQL+QKTGL KRVLQV
Sbjct: 269 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQV 312
>AY273889-1|AAP32471.2| 397|Homo sapiens LIM-homeobox 9 protein
protein.
Length = 397
Score = 91.9 bits (218), Expect = 3e-19
Identities = 42/44 (95%), Positives = 43/44 (97%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
MRTSFKHHQLRTMKSYFAINHNPDAKDLKQL+QKTGL KRVLQV
Sbjct: 270 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQV 313
>AL590115-6|CAH71763.1| 397|Homo sapiens LIM homeobox 9 protein.
Length = 397
Score = 91.9 bits (218), Expect = 3e-19
Identities = 42/44 (95%), Positives = 43/44 (97%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
MRTSFKHHQLRTMKSYFAINHNPDAKDLKQL+QKTGL KRVLQV
Sbjct: 270 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQV 313
>AL590115-3|CAH71760.1| 388|Homo sapiens LIM homeobox 9 protein.
Length = 388
Score = 91.9 bits (218), Expect = 3e-19
Identities = 42/44 (95%), Positives = 43/44 (97%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
MRTSFKHHQLRTMKSYFAINHNPDAKDLKQL+QKTGL KRVLQV
Sbjct: 261 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQV 304
>AK094511-1|BAC04371.1| 397|Homo sapiens protein ( Homo sapiens
cDNA FLJ37192 fis, clone BRALZ2003525, highly similar to
LIM/HOMEOBOX PROTEIN LHX2. ).
Length = 397
Score = 91.9 bits (218), Expect = 3e-19
Identities = 42/44 (95%), Positives = 43/44 (97%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
MRTSFKHHQLRTMKSYFAINHNPDAKDLKQL+QKTGL KRVLQV
Sbjct: 260 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQV 303
>AJ277916-1|CAB98128.1| 257|Homo sapiens LIM-homeobox 9 protein.
Length = 257
Score = 91.9 bits (218), Expect = 3e-19
Identities = 42/44 (95%), Positives = 43/44 (97%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
MRTSFKHHQLRTMKSYFAINHNPDAKDLKQL+QKTGL KRVLQV
Sbjct: 112 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQV 155
>AJ277915-1|CAB97493.1| 388|Homo sapiens LIM-homeobox 9 protein.
Length = 388
Score = 91.9 bits (218), Expect = 3e-19
Identities = 42/44 (95%), Positives = 43/44 (97%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
MRTSFKHHQLRTMKSYFAINHNPDAKDLKQL+QKTGL KRVLQV
Sbjct: 261 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQV 304
>AF124735-1|AAD20013.1| 389|Homo sapiens LIM-homeodomain protein
HLHX2 protein.
Length = 389
Score = 91.9 bits (218), Expect = 3e-19
Identities = 42/44 (95%), Positives = 43/44 (97%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
MRTSFKHHQLRTMKSYFAINHNPDAKDLKQL+QKTGL KRVLQV
Sbjct: 252 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQV 295
>AL590115-7|CAH71764.1| 330|Homo sapiens LIM homeobox 9 protein.
Length = 330
Score = 90.2 bits (214), Expect = 9e-19
Identities = 41/43 (95%), Positives = 42/43 (97%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 60
MRTSFKHHQLRTMKSYFAINHNPDAKDLKQL+QKTGL KRVLQ
Sbjct: 270 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 312
>AL590115-4|CAH71761.1| 321|Homo sapiens LIM homeobox 9 protein.
Length = 321
Score = 90.2 bits (214), Expect = 9e-19
Identities = 41/43 (95%), Positives = 42/43 (97%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 60
MRTSFKHHQLRTMKSYFAINHNPDAKDLKQL+QKTGL KRVLQ
Sbjct: 261 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 303
>BC040321-1|AAH40321.1| 356|Homo sapiens LIM homeobox 8 protein.
Length = 356
Score = 50.4 bits (115), Expect = 9e-07
Identities = 22/43 (51%), Positives = 35/43 (81%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTSF QL+ M++ FA ++NPDA+ L++L+++TGL +RV+QV
Sbjct: 229 RTSFTADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQV 271
>BC103938-1|AAI03939.1| 362|Homo sapiens LIM homeobox 6 protein.
Length = 362
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTSF QL+ M++ FA ++NPDA+ L++L+ TGL +RV+QV
Sbjct: 222 RTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQV 264
>BC103937-1|AAI03938.1| 363|Homo sapiens LIM homeobox 6 protein.
Length = 363
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTSF QL+ M++ FA ++NPDA+ L++L+ TGL +RV+QV
Sbjct: 223 RTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQV 265
>BC103936-1|AAI03937.1| 348|Homo sapiens LIM homeobox 6 protein.
Length = 348
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTSF QL+ M++ FA ++NPDA+ L++L+ TGL +RV+QV
Sbjct: 223 RTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQV 265
>AL162424-3|CAI14704.1| 348|Homo sapiens LIM homeobox 6 protein.
Length = 348
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTSF QL+ M++ FA ++NPDA+ L++L+ TGL +RV+QV
Sbjct: 223 RTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQV 265
>AL162424-2|CAI14703.1| 363|Homo sapiens LIM homeobox 6 protein.
Length = 363
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTSF QL+ M++ FA ++NPDA+ L++L+ TGL +RV+QV
Sbjct: 223 RTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQV 265
>AB031042-1|BAA83423.1| 348|Homo sapiens LIM-homeodomain (LHX)
protein 6.1b protein.
Length = 348
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTSF QL+ M++ FA ++NPDA+ L++L+ TGL +RV+QV
Sbjct: 223 RTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQV 265
>AB031041-1|BAA83422.1| 363|Homo sapiens LIM-homeodomain (LHX)
protein 6.1a protein.
Length = 363
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTSF QL+ M++ FA ++NPDA+ L++L+ TGL +RV+QV
Sbjct: 223 RTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQV 265
>L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain
protein protein.
Length = 3703
Score = 44.0 bits (99), Expect = 8e-05
Identities = 16/42 (38%), Positives = 30/42 (71%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 60
RT QLR ++ YF IN++P + +K+++ K+GLP++V++
Sbjct: 2149 RTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2190
Score = 35.9 bits (79), Expect = 0.021
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT F +QLR ++ +F N P + +QLS LP RV+ V
Sbjct: 2246 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVV 2288
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
+RT+ QL + + ++ NP K L ++ + GL KRV+QV
Sbjct: 2644 LRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQV 2687
Score = 33.1 bits (72), Expect = 0.15
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT + QL+ +KS F P + + L GLPKRV+QV
Sbjct: 2950 RTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQV 2992
>D10250-1|BAA01095.1| 2783|Homo sapiens alpha-fetoprotein enhancer
binding protein protein.
Length = 2783
Score = 44.0 bits (99), Expect = 8e-05
Identities = 16/42 (38%), Positives = 30/42 (71%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 60
RT QLR ++ YF IN++P + +K+++ K+GLP++V++
Sbjct: 1235 RTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 1276
Score = 35.9 bits (79), Expect = 0.021
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT F +QLR ++ +F N P + +QLS LP RV+ V
Sbjct: 1332 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVV 1374
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
+RT+ QL + + ++ NP K L ++ + GL KRV+QV
Sbjct: 1730 LRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQV 1773
Score = 33.1 bits (72), Expect = 0.15
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT + QL+ +KS F P + + L GLPKRV+QV
Sbjct: 2036 RTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQV 2078
>AC004943-1|AAC79153.1| 2553|Homo sapiens unknown protein.
Length = 2553
Score = 44.0 bits (99), Expect = 8e-05
Identities = 16/42 (38%), Positives = 30/42 (71%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 60
RT QLR ++ YF IN++P + +K+++ K+GLP++V++
Sbjct: 999 RTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 1040
Score = 35.9 bits (79), Expect = 0.021
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT F +QLR ++ +F N P + +QLS LP RV+ V
Sbjct: 1096 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVV 1138
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
+RT+ QL + + ++ NP K L ++ + GL KRV+QV
Sbjct: 1494 LRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQV 1537
Score = 33.1 bits (72), Expect = 0.15
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT + QL+ +KS F P + + L GLPKRV+QV
Sbjct: 1800 RTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQV 1842
>BC111936-1|AAI11937.1| 406|Homo sapiens LIM homeobox 1 protein.
Length = 406
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+ K QL T+K+ FA P +QL+Q+TGL RV+QV
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQV 226
>BC109230-1|AAI09231.1| 402|Homo sapiens LIM homeobox 5 protein.
Length = 402
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+ K QL T+K+ FA P +QL+Q+TGL RV+QV
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQV 226
>BC101674-1|AAI01675.1| 406|Homo sapiens LIM homeobox 1 protein.
Length = 406
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+ K QL T+K+ FA P +QL+Q+TGL RV+QV
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQV 226
>BC020470-1|AAH20470.1| 260|Homo sapiens LHX1 protein protein.
Length = 260
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+ K QL T+K+ FA P +QL+Q+TGL RV+QV
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQV 226
>AF291181-1|AAG36963.1| 402|Homo sapiens LHX5 protein protein.
Length = 402
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+ K QL T+K+ FA P +QL+Q+TGL RV+QV
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQV 226
>AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain 4
protein protein.
Length = 3567
Score = 38.7 bits (86), Expect = 0.003
Identities = 13/42 (30%), Positives = 31/42 (73%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 60
RT QL+ +++YF IN++P + ++++++K+GL ++V++
Sbjct: 2088 RTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2129
Score = 36.3 bits (80), Expect = 0.016
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT F +QLR ++ +F N P +++QLS LP RV+ V
Sbjct: 2185 RTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVV 2227
Score = 36.3 bits (80), Expect = 0.016
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT + QL+ +K+ F+ P ++ + L + GLPKRV+QV
Sbjct: 2888 RTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQV 2930
Score = 33.9 bits (74), Expect = 0.083
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
+RT+ QL + + ++ NP K L ++++ GL KRV+QV
Sbjct: 2563 LRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQV 2606
>AB083343-1|BAE96598.1| 3599|Homo sapiens zinc-finger homeodomain
protein 4 protein.
Length = 3599
Score = 38.7 bits (86), Expect = 0.003
Identities = 13/42 (30%), Positives = 31/42 (73%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 60
RT QL+ +++YF IN++P + ++++++K+GL ++V++
Sbjct: 2116 RTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2157
Score = 36.3 bits (80), Expect = 0.016
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT F +QLR ++ +F N P +++QLS LP RV+ V
Sbjct: 2213 RTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVV 2255
Score = 36.3 bits (80), Expect = 0.016
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT + QL+ +K+ F+ P ++ + L + GLPKRV+QV
Sbjct: 2916 RTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQV 2958
Score = 33.9 bits (74), Expect = 0.083
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
+RT+ QL + + ++ NP K L ++++ GL KRV+QV
Sbjct: 2591 LRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQV 2634
>U14755-1|AAA21644.1| 404|Homo sapiens LIM domain transcription
factor LIM-1 protein.
Length = 404
Score = 37.5 bits (83), Expect = 0.007
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 20 TSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
T+ K QL T+K+ FA P +QL+Q+TGL RV+QV
Sbjct: 185 TTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQV 226
>U07559-1|AAA81946.1| 346|Homo sapiens ISL-1 protein.
Length = 346
Score = 37.5 bits (83), Expect = 0.007
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
+RT QL T+++ +A N PDA +QL + TGL RV++V
Sbjct: 181 VRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRV 224
>S70721-1|AAD14064.1| 349|Homo sapiens isl-1 protein.
Length = 349
Score = 37.5 bits (83), Expect = 0.007
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
+RT QL T+++ +A N PDA +QL + TGL RV++V
Sbjct: 184 VRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRV 227
>BC031213-1|AAH31213.1| 349|Homo sapiens ISL1 transcription factor,
LIM/homeodomain, (islet-1) protein.
Length = 349
Score = 37.5 bits (83), Expect = 0.007
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
+RT QL T+++ +A N PDA +QL + TGL RV++V
Sbjct: 184 VRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRV 227
>BC012136-1|AAH12136.1| 359|Homo sapiens ISL2 transcription factor,
LIM/homeodomain, (islet-2) protein.
Length = 359
Score = 37.5 bits (83), Expect = 0.007
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
+RT QL T+++ +A N PDA +QL + TGL RV++V
Sbjct: 194 VRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRV 237
>BC011967-1|AAH11967.1| 359|Homo sapiens ISL2 transcription factor,
LIM/homeodomain, (islet-2) protein.
Length = 359
Score = 37.5 bits (83), Expect = 0.007
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
+RT QL T+++ +A N PDA +QL + TGL RV++V
Sbjct: 194 VRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRV 237
>AK131462-1|BAD18607.1| 1103|Homo sapiens protein ( Homo sapiens
cDNA FLJ16624 fis, clone TESTI4015442, moderately
similar to Mus musculus zinc finger homeodomain 4
(Zfh4-pending). ).
Length = 1103
Score = 36.3 bits (80), Expect = 0.016
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT + QL+ +K+ F+ P ++ + L + GLPKRV+QV
Sbjct: 420 RTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQV 462
Score = 33.9 bits (74), Expect = 0.083
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
+RT+ QL + + ++ NP K L ++++ GL KRV+QV
Sbjct: 95 LRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQV 138
>AK131399-1|BAD18546.1| 907|Homo sapiens protein ( Homo sapiens
cDNA FLJ16492 fis, clone CTONG2028758, highly similar
to Mus musculus zfh-4 mRNA for zinc-finger homeodomain
protein 4. ).
Length = 907
Score = 36.3 bits (80), Expect = 0.016
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT + QL+ +K+ F+ P ++ + L + GLPKRV+QV
Sbjct: 624 RTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQV 666
Score = 33.9 bits (74), Expect = 0.083
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
+RT+ QL + + ++ NP K L ++++ GL KRV+QV
Sbjct: 299 LRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQV 342
>AB051549-1|BAB21853.1| 1460|Homo sapiens KIAA1762 protein protein.
Length = 1460
Score = 35.5 bits (78), Expect = 0.027
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT QL+ MK+ + P ++ + L ++ GLPKRV+QV
Sbjct: 957 RTQMSSLQLKIMKACYEAYRTPTMQECEVLGEEIGLPKRVIQV 999
Score = 33.1 bits (72), Expect = 0.15
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
+RT+ QL + ++ + NP K L +S++ GL KRV+QV
Sbjct: 748 LRTTILPEQLEILYRWYMQDSNPTRKMLDCISEEVGLKKRVVQV 791
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT F Q + ++S+F + P ++++L+ GL RV+ V
Sbjct: 487 RTKFTEFQTQALQSFFETSAYPKDGEVERLASLLGLASRVVVV 529
>DQ854808-1|ABI23974.1| 239|Homo sapiens visual system homeobox 1
transcript variant 2 protein.
Length = 239
Score = 33.9 bits (74), Expect = 0.083
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQVA 62
RT F HQL ++ F+ H PD + L+ KT LP+ +QV+
Sbjct: 168 RTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVS 211
>AL138781-3|CAI16879.1| 397|Homo sapiens LIM homeobox 3 protein.
Length = 397
Score = 33.9 bits (74), Expect = 0.083
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+ QL T+KS + + P +QLS +TGL RV+QV
Sbjct: 161 RTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQV 203
>AL138781-2|CAI16878.1| 402|Homo sapiens LIM homeobox 3 protein.
Length = 402
Score = 33.9 bits (74), Expect = 0.083
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+ QL T+KS + + P +QLS +TGL RV+QV
Sbjct: 166 RTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQV 208
>AF367089-1|AAL26314.1| 397|Homo sapiens LIM homeobox protein 3
protein.
Length = 397
Score = 33.9 bits (74), Expect = 0.083
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+ QL T+KS + + P +QLS +TGL RV+QV
Sbjct: 161 RTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQV 203
>AF251034-1|AAF99657.1| 239|Homo sapiens homeodomain protein RINX,
S1 isoform protein.
Length = 239
Score = 33.9 bits (74), Expect = 0.083
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQVA 62
RT F HQL ++ F+ H PD + L+ KT LP+ +QV+
Sbjct: 168 RTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVS 211
>AF211950-1|AAG10399.1| 397|Homo sapiens lim-homeobox transcription
factor LHX3 protein.
Length = 397
Score = 33.9 bits (74), Expect = 0.083
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+ QL T+KS + + P +QLS +TGL RV+QV
Sbjct: 166 RTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQV 208
>AF156889-1|AAF36809.1| 402|Homo sapiens LIM homeobox protein 3
isoform b protein.
Length = 402
Score = 33.9 bits (74), Expect = 0.083
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+ QL T+KS + + P +QLS +TGL RV+QV
Sbjct: 166 RTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQV 208
>AF156888-1|AAF36808.1| 397|Homo sapiens LIM homeobox protein 3
isoform a protein.
Length = 397
Score = 33.9 bits (74), Expect = 0.083
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+ QL T+KS + + P +QLS +TGL RV+QV
Sbjct: 161 RTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQV 203
>AF096169-1|AAF17292.1| 370|Homo sapiens LHX3 protein protein.
Length = 370
Score = 33.9 bits (74), Expect = 0.083
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+ QL T+KS + + P +QLS +TGL RV+QV
Sbjct: 134 RTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQV 176
>AF096168-1|AAF17291.1| 370|Homo sapiens LHX3 protein protein.
Length = 370
Score = 33.9 bits (74), Expect = 0.083
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+ QL T+KS + + P +QLS +TGL RV+QV
Sbjct: 134 RTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQV 176
>DQ854812-1|ABI23978.1| 301|Homo sapiens visual system homeobox 1
transcript variant 6 protein.
Length = 301
Score = 33.5 bits (73), Expect = 0.11
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT F HQL ++ F+ H PD + L+ KT LP+ +QV
Sbjct: 168 RTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQV 210
>DQ854809-1|ABI23975.1| 280|Homo sapiens visual system homeobox 1
transcript variant 3 protein.
Length = 280
Score = 33.5 bits (73), Expect = 0.11
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT F HQL ++ F+ H PD + L+ KT LP+ +QV
Sbjct: 168 RTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQV 210
>DQ854807-1|ABI23973.1| 365|Homo sapiens visual system homeobox 1
transcript variant 1 protein.
Length = 365
Score = 33.5 bits (73), Expect = 0.11
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT F HQL ++ F+ H PD + L+ KT LP+ +QV
Sbjct: 168 RTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQV 210
>BC126228-1|AAI26229.1| 365|Homo sapiens visual system homeobox 1
homolog, CHX10-like (zebrafish) protein.
Length = 365
Score = 33.5 bits (73), Expect = 0.11
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT F HQL ++ F+ H PD + L+ KT LP+ +QV
Sbjct: 168 RTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQV 210
>AL080312-3|CAI18918.1| 365|Homo sapiens visual system homeobox 1
homolog, CHX10-like (zebrafish) protein.
Length = 365
Score = 33.5 bits (73), Expect = 0.11
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT F HQL ++ F+ H PD + L+ KT LP+ +QV
Sbjct: 168 RTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQV 210
>AF251033-1|AAF99656.1| 365|Homo sapiens homeodomain protein RINX,
L1 isoform protein.
Length = 365
Score = 33.5 bits (73), Expect = 0.11
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT F HQL ++ F+ H PD + L+ KT LP+ +QV
Sbjct: 168 RTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQV 210
>AF176797-1|AAF37425.2| 365|Homo sapiens transcription factor VSX1
protein.
Length = 365
Score = 33.5 bits (73), Expect = 0.11
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT F HQL ++ F+ H PD + L+ KT LP+ +QV
Sbjct: 168 RTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQV 210
>X71488-1|CAA50589.1| 264|Homo sapiens Brn-3b protein.
Length = 264
Score = 33.1 bits (72), Expect = 0.15
Identities = 14/43 (32%), Positives = 27/43 (62%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTS + R++++YFAI P ++ + +++K L K V++V
Sbjct: 204 RTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRV 246
>U10061-1|AAA57160.1| 338|Homo sapiens POU domain factor protein.
Length = 338
Score = 33.1 bits (72), Expect = 0.15
Identities = 14/43 (32%), Positives = 27/43 (62%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTS + R++++YFAI P ++ + +++K L K V++V
Sbjct: 278 RTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRV 320
>U06233-1|AAA16509.1| 410|Homo sapiens Brn-3b protein.
Length = 410
Score = 33.1 bits (72), Expect = 0.15
Identities = 14/43 (32%), Positives = 27/43 (62%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTS + R++++YFAI P ++ + +++K L K V++V
Sbjct: 350 RTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRV 392
>L20434-1|AAA36393.1| 118|Homo sapiens POU domain protein protein.
Length = 118
Score = 33.1 bits (72), Expect = 0.15
Identities = 14/43 (32%), Positives = 27/43 (62%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTS + R++++YFAI P ++ + +++K L K V++V
Sbjct: 76 RTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRV 118
>BC112207-1|AAI12208.1| 338|Homo sapiens POU domain, class 4,
transcription factor 3 protein.
Length = 338
Score = 33.1 bits (72), Expect = 0.15
Identities = 14/43 (32%), Positives = 27/43 (62%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTS + R++++YFAI P ++ + +++K L K V++V
Sbjct: 278 RTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRV 320
>BC104923-1|AAI04924.1| 338|Homo sapiens POU domain, class 4,
transcription factor 3 protein.
Length = 338
Score = 33.1 bits (72), Expect = 0.15
Identities = 14/43 (32%), Positives = 27/43 (62%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTS + R++++YFAI P ++ + +++K L K V++V
Sbjct: 278 RTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRV 320
>AF044575-1|AAC06203.1| 338|Homo sapiens transcription factor
POU4F3 protein.
Length = 338
Score = 33.1 bits (72), Expect = 0.15
Identities = 14/43 (32%), Positives = 27/43 (62%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTS + R++++YFAI P ++ + +++K L K V++V
Sbjct: 278 RTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRV 320
>Y11536-1|CAA72299.1| 292|Homo sapiens SHOXa protein protein.
Length = 292
Score = 32.7 bits (71), Expect = 0.19
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PDA ++LSQ+ GL + +QV
Sbjct: 121 RTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 163
>Y11535-1|CAA72298.1| 225|Homo sapiens SHOXb protein protein.
Length = 225
Score = 32.7 bits (71), Expect = 0.19
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PDA ++LSQ+ GL + +QV
Sbjct: 121 RTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 163
>X64624-1|CAA45907.1| 331|Homo sapiens RDC-1 protein.
Length = 331
Score = 32.7 bits (71), Expect = 0.19
Identities = 13/43 (30%), Positives = 27/43 (62%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTS + R++++YFA+ P ++ + +++K L K V++V
Sbjct: 271 RTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRV 313
>U89331-1|AAC18820.1| 292|Homo sapiens pseudoautosomal
homeodomain-containing protein protein.
Length = 292
Score = 32.7 bits (71), Expect = 0.19
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PDA ++LSQ+ GL + +QV
Sbjct: 121 RTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 163
>U10063-1|AAA57161.1| 423|Homo sapiens POU domain factor protein.
Length = 423
Score = 32.7 bits (71), Expect = 0.19
Identities = 13/43 (30%), Positives = 27/43 (62%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTS + R++++YFA+ P ++ + +++K L K V++V
Sbjct: 363 RTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRV 405
>L20433-1|AAA65605.1| 420|Homo sapiens octamer binding
transcription factor 1 protein.
Length = 420
Score = 32.7 bits (71), Expect = 0.19
Identities = 13/43 (30%), Positives = 27/43 (62%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTS + R++++YFA+ P ++ + +++K L K V++V
Sbjct: 360 RTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRV 402
>BX004827-2|CAI41572.1| 225|Homo sapiens short stature homeobox
protein.
Length = 225
Score = 32.7 bits (71), Expect = 0.19
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PDA ++LSQ+ GL + +QV
Sbjct: 121 RTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 163
>BX004827-1|CAI41571.1| 292|Homo sapiens short stature homeobox
protein.
Length = 292
Score = 32.7 bits (71), Expect = 0.19
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PDA ++LSQ+ GL + +QV
Sbjct: 121 RTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 163
>BC008829-1|AAH08829.1| 355|Homo sapiens SHOX2 protein protein.
Length = 355
Score = 32.7 bits (71), Expect = 0.19
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PDA ++LSQ+ GL + +QV
Sbjct: 168 RTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 210
>AL445209-3|CAI15184.1| 419|Homo sapiens POU domain, class 4,
transcription factor 1 protein.
Length = 419
Score = 32.7 bits (71), Expect = 0.19
Identities = 13/43 (30%), Positives = 27/43 (62%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTS + R++++YFA+ P ++ + +++K L K V++V
Sbjct: 359 RTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRV 401
>AJ002368-1|CAA05342.1| 190|Homo sapiens homeobox protein SHOTb
protein.
Length = 190
Score = 32.7 bits (71), Expect = 0.19
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PDA ++LSQ+ GL + +QV
Sbjct: 15 RTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 57
>AJ002367-1|CAA05341.1| 251|Homo sapiens homeobox protein SHOTa
protein.
Length = 251
Score = 32.7 bits (71), Expect = 0.19
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PDA ++LSQ+ GL + +QV
Sbjct: 64 RTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 106
>AF022654-1|AAC39662.1| 190|Homo sapiens homeodomain protein
protein.
Length = 190
Score = 32.7 bits (71), Expect = 0.19
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PDA ++LSQ+ GL + +QV
Sbjct: 15 RTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 57
>BC032512-1|AAH32512.1| 184|Homo sapiens retina and anterior
neural fold homeobox like 1 protein.
Length = 184
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F +QL ++ F +H PD ++L+ K LP+ +QV
Sbjct: 31 RTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQV 73
>BC018709-1|AAH18709.1| 184|Homo sapiens retina and anterior
neural fold homeobox like 1 protein.
Length = 184
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F +QL ++ F +H PD ++L+ K LP+ +QV
Sbjct: 31 RTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQV 73
>BC011759-1|AAH11759.1| 390|Homo sapiens LIM homeobox 4 protein.
Length = 390
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+ QL T+K+ + + P +QLS +TGL RV+QV
Sbjct: 161 RTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQV 203
>BC007284-1|AAH07284.1| 184|Homo sapiens RAXL1 protein protein.
Length = 184
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F +QL ++ F +H PD ++L+ K LP+ +QV
Sbjct: 31 RTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQV 73
>AY628411-1|AAT46026.1| 292|Homo sapiens short stature homeobox
transcript variant SHOXa protein.
Length = 292
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PDA ++LSQ+ GL + +QV
Sbjct: 121 RTNFTLEQLNELERLFDETHYPDAFMHEELSQRLGLSEARVQV 163
>AY211277-1|AAP41547.1| 184|Homo sapiens Q50-type retinal
homeobox protein.
Length = 184
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F +QL ++ F +H PD ++L+ K LP+ +QV
Sbjct: 31 RTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQV 73
>AY053457-1|AAL07260.1| 390|Homo sapiens LIM homeodomain protein
protein.
Length = 390
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+ QL T+K+ + + P +QLS +TGL RV+QV
Sbjct: 161 RTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQV 203
>AL139141-1|CAI19364.1| 390|Homo sapiens LIM homeobox 4 protein.
Length = 390
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+ QL T+K+ + + P +QLS +TGL RV+QV
Sbjct: 161 RTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQV 203
>AF405430-1|AAM91896.1| 390|Homo sapiens LIM homeobox protein 4
protein.
Length = 390
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+ QL T+K+ + + P +QLS +TGL RV+QV
Sbjct: 161 RTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQV 203
>AF282899-1|AAK69169.1| 367|Homo sapiens LIM homeobox protein
protein.
Length = 367
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+ QL T+K+ + + P +QLS +TGL RV+QV
Sbjct: 138 RTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQV 180
>AF251562-1|AAM19349.1| 239|Homo sapiens LIM homeobox protein
protein.
Length = 239
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+ QL T+K+ + + P +QLS +TGL RV+QV
Sbjct: 10 RTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQV 52
>AF179849-1|AAK70923.1| 390|Homo sapiens LIM homeobox protein 4
protein.
Length = 390
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+ QL T+K+ + + P +QLS +TGL RV+QV
Sbjct: 161 RTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQV 203
>AB055703-1|BAB62817.1| 367|Homo sapiens LIM homeobox 4 protein.
Length = 367
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+ QL T+K+ + + P +QLS +TGL RV+QV
Sbjct: 138 RTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQV 180
>AB037683-1|BAC01272.1| 240|Homo sapiens LIM homeobox protein 4
protein.
Length = 240
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+ QL T+K+ + + P +QLS +TGL RV+QV
Sbjct: 11 RTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQV 53
>Z95332-5|CAG38363.1| 436|Homo sapiens paired box gene 6 (aniridia,
keratitis) protein.
Length = 436
Score = 31.9 bits (69), Expect = 0.34
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTSF Q+ ++ F H PD ++L+ K LP+ +QV
Sbjct: 228 RTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQV 270
>Z95332-4|CAG38362.1| 422|Homo sapiens paired box gene 6 (aniridia,
keratitis) protein.
Length = 422
Score = 31.9 bits (69), Expect = 0.34
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTSF Q+ ++ F H PD ++L+ K LP+ +QV
Sbjct: 214 RTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQV 256
>Z83853-1|CAI18752.1| 245|Homo sapiens protein ( Human DNA sequence
from clone SC22CB-109E1 on chromosome 22q12.3. ).
Length = 245
Score = 31.9 bits (69), Expect = 0.34
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
+RT+F QL ++ F H PD QL+ + LP+ +Q+
Sbjct: 85 VRTTFTTEQLHELEKIFHFTHYPDVHIRSQLAARINLPEARVQI 128
>Z83307-5|CAG38086.1| 422|Homo sapiens paired box gene 6 (aniridia,
keratitis) protein.
Length = 422
Score = 31.9 bits (69), Expect = 0.34
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTSF Q+ ++ F H PD ++L+ K LP+ +QV
Sbjct: 214 RTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQV 256
>Z83307-4|CAG38087.1| 436|Homo sapiens paired box gene 6 (aniridia,
keratitis) protein.
Length = 436
Score = 31.9 bits (69), Expect = 0.34
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTSF Q+ ++ F H PD ++L+ K LP+ +QV
Sbjct: 228 RTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQV 270
>M93650-1|AAA36416.1| 422|Homo sapiens paired-box protein protein.
Length = 422
Score = 31.9 bits (69), Expect = 0.34
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTSF Q+ ++ F H PD ++L+ K LP+ +QV
Sbjct: 214 RTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQV 256
>M77844-2|AAA59963.1| 422|Homo sapiens oculorhombin protein.
Length = 422
Score = 31.9 bits (69), Expect = 0.34
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTSF Q+ ++ F H PD ++L+ K LP+ +QV
Sbjct: 214 RTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQV 256
>M77844-1|AAA59962.1| 422|Homo sapiens oculorhombin protein.
Length = 422
Score = 31.9 bits (69), Expect = 0.34
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTSF Q+ ++ F H PD ++L+ K LP+ +QV
Sbjct: 214 RTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQV 256
>DQ854811-1|ABI23977.1| 236|Homo sapiens visual system homeobox 1
transcript variant 5 protein.
Length = 236
Score = 31.9 bits (69), Expect = 0.34
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 60
RT F HQL ++ F+ H PD + L+ KT LP+ +Q
Sbjct: 168 RTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 209
>DQ854810-1|ABI23976.1| 218|Homo sapiens visual system homeobox 1
transcript variant 4 protein.
Length = 218
Score = 31.9 bits (69), Expect = 0.34
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 60
RT F HQL ++ F+ H PD + L+ KT LP+ +Q
Sbjct: 168 RTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 209
>BC113633-1|AAI13634.1| 245|Homo sapiens intestine-specific
homeobox protein.
Length = 245
Score = 31.9 bits (69), Expect = 0.34
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
+RT+F QL ++ F H PD QL+ + LP+ +Q+
Sbjct: 85 VRTTFTTEQLHELEKIFHFTHYPDVHIRSQLAARINLPEARVQI 128
>BC112212-1|AAI12213.1| 245|Homo sapiens intestine-specific
homeobox protein.
Length = 245
Score = 31.9 bits (69), Expect = 0.34
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
+RT+F QL ++ F H PD QL+ + LP+ +Q+
Sbjct: 85 VRTTFTTEQLHELEKIFHFTHYPDVHIRSQLAARINLPEARVQI 128
>BC011953-1|AAH11953.1| 422|Homo sapiens paired box gene 6
(aniridia, keratitis) protein.
Length = 422
Score = 31.9 bits (69), Expect = 0.34
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTSF Q+ ++ F H PD ++L+ K LP+ +QV
Sbjct: 214 RTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQV 256
>AY707088-1|AAU12168.1| 422|Homo sapiens paired box gene 6 isoform
a protein.
Length = 422
Score = 31.9 bits (69), Expect = 0.34
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTSF Q+ ++ F H PD ++L+ K LP+ +QV
Sbjct: 214 RTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQV 256
>AY047583-1|AAK95849.1| 422|Homo sapiens paired box protein PAX6
protein.
Length = 422
Score = 31.9 bits (69), Expect = 0.34
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTSF Q+ ++ F H PD ++L+ K LP+ +QV
Sbjct: 214 RTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQV 256
>AL024494-1|CAI19818.1| 245|Homo sapiens protein ( Human DNA
sequence from clone RP1-215F16 on chromosome
22q12.1-12.3.).
Length = 245
Score = 31.9 bits (69), Expect = 0.34
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
+RT+F QL ++ F H PD QL+ + LP+ +Q+
Sbjct: 85 VRTTFTTEQLHELEKIFHFTHYPDVHIRSQLAARINLPEARVQI 128
>AJ404888-1|CAC15060.1| 411|Homo sapiens homeodomain transcription
factor ALX4 protein.
Length = 411
Score = 31.9 bits (69), Expect = 0.34
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F +QL ++ F H PD +QL+ +T L + +QV
Sbjct: 218 RTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQV 260
>AJ279074-1|CAC15120.1| 411|Homo sapiens homeodomain transcription
factor ALX4 protein.
Length = 411
Score = 31.9 bits (69), Expect = 0.34
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F +QL ++ F H PD +QL+ +T L + +QV
Sbjct: 218 RTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQV 260
>AF308825-1|AAK38835.1| 411|Homo sapiens aristaless-like homeobox 4
protein.
Length = 411
Score = 31.9 bits (69), Expect = 0.34
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F +QL ++ F H PD +QL+ +T L + +QV
Sbjct: 218 RTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQV 260
>AF294629-1|AAG23961.1| 410|Homo sapiens aristaless-like 4 protein.
Length = 410
Score = 31.9 bits (69), Expect = 0.34
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F +QL ++ F H PD +QL+ +T L + +QV
Sbjct: 218 RTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQV 260
>AF115392-1|AAD23438.1| 346|Homo sapiens retinal homeobox protein
RX protein.
Length = 346
Score = 31.9 bits (69), Expect = 0.34
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F +QL ++ F +H PD ++L+ K LP+ +QV
Sbjct: 140 RTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQV 182
>AB209177-1|BAD92414.1| 385|Homo sapiens paired box gene 6 isoform
a variant protein.
Length = 385
Score = 31.9 bits (69), Expect = 0.34
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTSF Q+ ++ F H PD ++L+ K LP+ +QV
Sbjct: 177 RTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQV 219
>AB058691-1|BAB47417.1| 413|Homo sapiens KIAA1788 protein protein.
Length = 413
Score = 31.9 bits (69), Expect = 0.34
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F +QL ++ F H PD +QL+ +T L + +QV
Sbjct: 220 RTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQV 262
>BC128153-1|AAI28154.1| 361|Homo sapiens ceh-10 homeodomain
containing homolog (C. elegans) protein.
Length = 361
Score = 31.1 bits (67), Expect = 0.59
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT F +QL ++ F H PD + L+ KT LP+ +QV
Sbjct: 152 RTIFTSYQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQV 194
>AY336059-1|AAQ01593.1| 361|Homo sapiens ceh-10 homeodomain
containing protein protein.
Length = 361
Score = 31.1 bits (67), Expect = 0.59
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT F +QL ++ F H PD + L+ KT LP+ +QV
Sbjct: 152 RTIFTSYQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQV 194
>Z35141-1|CAA84513.1| 467|Homo sapiens PAX7 paired box containing
transcription factor protein.
Length = 467
Score = 30.7 bits (66), Expect = 0.78
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD ++L+Q+T L + +QV
Sbjct: 221 RTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQV 263
>X96744-2|CAA65522.1| 520|Homo sapiens PAX7 protein.
Length = 520
Score = 30.7 bits (66), Expect = 0.78
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD ++L+Q+T L + +QV
Sbjct: 221 RTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQV 263
>X96744-1|CAA65521.1| 518|Homo sapiens PAX7 protein.
Length = 518
Score = 30.7 bits (66), Expect = 0.78
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD ++L+Q+T L + +QV
Sbjct: 219 RTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQV 261
>X96743-1|CAA65520.1| 520|Homo sapiens paired box containing
transcription factor protein.
Length = 520
Score = 30.7 bits (66), Expect = 0.78
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD ++L+Q+T L + +QV
Sbjct: 221 RTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQV 263
>DQ322591-1|ABC48797.1| 505|Homo sapiens PAX7 transcriptional
factor isoform B protein.
Length = 505
Score = 30.7 bits (66), Expect = 0.78
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD ++L+Q+T L + +QV
Sbjct: 221 RTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQV 263
>BC127102-1|AAI27103.1| 1214|Homo sapiens zinc finger E-box binding
homeobox 2 protein.
Length = 1214
Score = 30.7 bits (66), Expect = 0.78
Identities = 12/39 (30%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 22 FKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 60
+K H + +K+Y+A+N P++ +L ++S GLP+ ++
Sbjct: 652 YKDH-MSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVK 689
>BC127101-1|AAI27102.1| 1213|Homo sapiens zinc finger E-box binding
homeobox 2 protein.
Length = 1213
Score = 30.7 bits (66), Expect = 0.78
Identities = 12/39 (30%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 22 FKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 60
+K H + +K+Y+A+N P++ +L ++S GLP+ ++
Sbjct: 651 YKDH-MSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVK 688
>BC121166-1|AAI21167.1| 518|Homo sapiens paired box gene 7 protein.
Length = 518
Score = 30.7 bits (66), Expect = 0.78
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD ++L+Q+T L + +QV
Sbjct: 219 RTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQV 261
>BC121165-1|AAI21166.1| 518|Homo sapiens paired box gene 7 protein.
Length = 518
Score = 30.7 bits (66), Expect = 0.78
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD ++L+Q+T L + +QV
Sbjct: 219 RTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQV 261
>AY029472-1|AAK52081.1| 1214|Homo sapiens smad-interacting protein-1
protein.
Length = 1214
Score = 30.7 bits (66), Expect = 0.78
Identities = 12/39 (30%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 22 FKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 60
+K H + +K+Y+A+N P++ +L ++S GLP+ ++
Sbjct: 652 YKDH-MSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVK 689
>AL021528-1|CAA16432.1| 520|Homo sapiens paired box gene 7 protein.
Length = 520
Score = 30.7 bits (66), Expect = 0.78
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD ++L+Q+T L + +QV
Sbjct: 221 RTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQV 263
>AC010130-1|AAX93276.1| 1079|Homo sapiens unknown protein.
Length = 1079
Score = 30.7 bits (66), Expect = 0.78
Identities = 12/39 (30%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 22 FKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 60
+K H + +K+Y+A+N P++ +L ++S GLP+ ++
Sbjct: 517 YKDH-MSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVK 554
>AB056507-1|BAB40819.1| 1214|Homo sapiens Smad interacting protein 1
protein.
Length = 1214
Score = 30.7 bits (66), Expect = 0.78
Identities = 12/39 (30%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 22 FKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 60
+K H + +K+Y+A+N P++ +L ++S GLP+ ++
Sbjct: 652 YKDH-MSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVK 689
>AB011141-1|BAA25495.2| 1318|Homo sapiens KIAA0569 protein protein.
Length = 1318
Score = 30.7 bits (66), Expect = 0.78
Identities = 12/39 (30%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 22 FKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 60
+K H + +K+Y+A+N P++ +L ++S GLP+ ++
Sbjct: 756 YKDH-MSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVK 793
>U19969-1|AAA62155.1| 1154|Homo sapiens ZEB protein.
Length = 1154
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 27 LRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 60
L +K+Y+A+N P A++L +++ LP V++
Sbjct: 627 LSLLKAYYALNAQPSAEELSKIADSVNLPLDVVK 660
>U12170-1|AAA20602.1| 1124|Homo sapiens zinc finger homeodomain
protein protein.
Length = 1124
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 27 LRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 60
L +K+Y+A+N P A++L +++ LP V++
Sbjct: 593 LSLLKAYYALNAQPSAEELSKIADSVNLPLDVVK 626
>D15050-1|BAA03646.1| 1124|Homo sapiens transcription factor AREB6
protein.
Length = 1124
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 27 LRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 60
L +K+Y+A+N P A++L +++ LP V++
Sbjct: 593 LSLLKAYYALNAQPSAEELSKIADSVNLPLDVVK 626
>BC112392-1|AAI12393.1| 1125|Homo sapiens zinc finger E-box binding
homeobox 1 protein.
Length = 1125
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 27 LRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 60
L +K+Y+A+N P A++L +++ LP V++
Sbjct: 594 LSLLKAYYALNAQPSAEELSKIADSVNLPLDVVK 627
>BC069076-1|AAH69076.1| 226|Homo sapiens prophet of Pit1,
paired-like homeodomain transcription factor protein.
Length = 226
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++S F N PD + L++ TGL + +QV
Sbjct: 73 RTTFSPVQLEQLESAFGRNQYPDIWARESLARDTGLSEARIQV 115
>BC009572-1|AAH09572.1| 1059|Homo sapiens Unknown (protein for
IMAGE:4245215) protein.
Length = 1059
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 27 LRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 60
L +K+Y+A+N P A++L +++ LP V++
Sbjct: 593 LSLLKAYYALNAQPSAEELSKIADSVNLPLDVVK 626
>AL355148-2|CAI15108.1| 1124|Homo sapiens transcription factor 8
(represses interleukin 2 expression) protein.
Length = 1124
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 27 LRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 60
L +K+Y+A+N P A++L +++ LP V++
Sbjct: 593 LSLLKAYYALNAQPSAEELSKIADSVNLPLDVVK 626
>AL355148-1|CAI15107.1| 1104|Homo sapiens transcription factor 8
(represses interleukin 2 expression) protein.
Length = 1104
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 27 LRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 60
L +K+Y+A+N P A++L +++ LP V++
Sbjct: 573 LSLLKAYYALNAQPSAEELSKIADSVNLPLDVVK 606
>AL161935-2|CAH74131.1| 1104|Homo sapiens transcription factor 8
(represses interleukin 2 expression) protein.
Length = 1104
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 27 LRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 60
L +K+Y+A+N P A++L +++ LP V++
Sbjct: 573 LSLLKAYYALNAQPSAEELSKIADSVNLPLDVVK 606
>AL161935-1|CAH74132.1| 1124|Homo sapiens transcription factor 8
(represses interleukin 2 expression) protein.
Length = 1124
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 27 LRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 60
L +K+Y+A+N P A++L +++ LP V++
Sbjct: 593 LSLLKAYYALNAQPSAEELSKIADSVNLPLDVVK 626
>AL158080-2|CAI17319.1| 1104|Homo sapiens transcription factor 8
(represses interleukin 2 expression) protein.
Length = 1104
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 27 LRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 60
L +K+Y+A+N P A++L +++ LP V++
Sbjct: 573 LSLLKAYYALNAQPSAEELSKIADSVNLPLDVVK 606
>AL158080-1|CAI17320.1| 1124|Homo sapiens transcription factor 8
(represses interleukin 2 expression) protein.
Length = 1124
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 27 LRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 60
L +K+Y+A+N P A++L +++ LP V++
Sbjct: 593 LSLLKAYYALNAQPSAEELSKIADSVNLPLDVVK 626
>AL137797-2|CAI19184.1| 377|Homo sapiens diencephalon/mesencephalon
homeobox 1 protein.
Length = 377
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD ++L+ T LP+ +QV
Sbjct: 70 RTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQV 112
>AL137797-1|CAI19185.1| 382|Homo sapiens diencephalon/mesencephalon
homeobox 1 protein.
Length = 382
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD ++L+ T LP+ +QV
Sbjct: 75 RTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQV 117
>AL117340-2|CAI12550.1| 1124|Homo sapiens transcription factor 8
(represses interleukin 2 expression) protein.
Length = 1124
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 27 LRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 60
L +K+Y+A+N P A++L +++ LP V++
Sbjct: 593 LSLLKAYYALNAQPSAEELSKIADSVNLPLDVVK 626
>AL117340-1|CAI12549.1| 1104|Homo sapiens transcription factor 8
(represses interleukin 2 expression) protein.
Length = 1104
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 27 LRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 60
L +K+Y+A+N P A++L +++ LP V++
Sbjct: 573 LSLLKAYYALNAQPSAEELSKIADSVNLPLDVVK 606
>AK091478-1|BAC03673.1| 1104|Homo sapiens protein ( Homo sapiens
cDNA FLJ34159 fis, clone FCBBF3013623, highly similar to
NIL-2-A ZINC FINGER PROTEIN. ).
Length = 1104
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 27 LRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 60
L +K+Y+A+N P A++L +++ LP V++
Sbjct: 573 LSLLKAYYALNAQPSAEELSKIADSVNLPLDVVK 606
>AF398528-1|AAM90590.1| 382|Homo sapiens homeoprotein MBX-L
protein.
Length = 382
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD ++L+ T LP+ +QV
Sbjct: 75 RTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQV 117
>AF398527-1|AAM90589.1| 377|Homo sapiens homeoprotein MBX-S
protein.
Length = 377
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD ++L+ T LP+ +QV
Sbjct: 70 RTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQV 112
>AF076215-1|AAC77454.1| 226|Homo sapiens prophet of Pit1 protein.
Length = 226
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++S F N PD + L++ TGL + +QV
Sbjct: 73 RTTFSPVQLEQLESAFGRNQYPDIWARESLARDTGLSEARIQV 115
>AF076214-1|AAC77453.1| 226|Homo sapiens prophet of Pit1 protein.
Length = 226
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++S F N PD + L++ TGL + +QV
Sbjct: 73 RTTFSPVQLEQLESAFGRNQYPDIWARESLARDTGLSEARIQV 115
>AF041141-1|AAC27900.1| 226|Homo sapiens pituitary specific
homeodomain protein protein.
Length = 226
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++S F N PD + L++ TGL + +QV
Sbjct: 73 RTTFSPVQLEQLESAFGRNQYPDIWARESLARDTGLSEARIQV 115
>AB037699-1|BAC00920.1| 382|Homo sapiens PaxB protein.
Length = 382
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD ++L+ T LP+ +QV
Sbjct: 75 RTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQV 117
>U81600-1|AAB39864.1| 164|Homo sapiens paired-like homeodomain
protein PRX2 protein.
Length = 164
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL+ ++ F H PDA ++L+++ L + +QV
Sbjct: 19 RTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQV 61
>D82344-1|BAA11555.1| 314|Homo sapiens NBPhox protein.
Length = 314
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
+RT+F QL+ ++ FA H PD ++L+ K L + +QV
Sbjct: 101 IRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQV 144
>BC113428-1|AAI13429.1| 343|Homo sapiens aristaless-like homeobox 3
protein.
Length = 343
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD +QL+ +T L + +QV
Sbjct: 157 RTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQV 199
>BC112007-1|AAI12008.1| 343|Homo sapiens ALX3 protein protein.
Length = 343
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD +QL+ +T L + +QV
Sbjct: 157 RTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQV 199
>BC041564-1|AAH41564.1| 284|Homo sapiens paired-like (aristaless)
homeobox 2a protein.
Length = 284
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
+RT+F QL+ ++ FA H PD ++L+ K L + +QV
Sbjct: 93 IRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQV 136
>BC017199-1|AAH17199.1| 314|Homo sapiens paired-like homeobox 2b
protein.
Length = 314
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
+RT+F QL+ ++ FA H PD ++L+ K L + +QV
Sbjct: 101 IRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQV 144
>BC014645-1|AAH14645.1| 253|Homo sapiens paired related homeobox 2
protein.
Length = 253
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL+ ++ F H PDA ++L+++ L + +QV
Sbjct: 108 RTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQV 150
>AY662674-1|AAV84357.1| 268|Homo sapiens predicted NUP98/PRRX2
fusion protein protein.
Length = 268
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL+ ++ F H PDA ++L+++ L + +QV
Sbjct: 125 RTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQV 167
>AL590369-7|CAI14511.1| 253|Homo sapiens paired related homeobox 2
protein.
Length = 253
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL+ ++ F H PDA ++L+++ L + +QV
Sbjct: 108 RTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQV 150
>AL160006-1|CAI22714.1| 343|Homo sapiens aristaless-like homeobox 3
protein.
Length = 343
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD +QL+ +T L + +QV
Sbjct: 157 RTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQV 199
>AF117979-1|AAD26698.1| 314|Homo sapiens homeodomain transcription
factor NBPHOX protein.
Length = 314
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
+RT+F QL+ ++ FA H PD ++L+ K L + +QV
Sbjct: 101 IRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQV 144
>AF061970-1|AAF17708.1| 253|Homo sapiens paired related homeobox
protein protein.
Length = 253
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL+ ++ F H PDA ++L+++ L + +QV
Sbjct: 108 RTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQV 150
>AF022724-1|AAB82744.1| 284|Homo sapiens ARIX homeodomain protein
protein.
Length = 284
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
+RT+F QL+ ++ FA H PD ++L+ K L + +QV
Sbjct: 93 IRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQV 136
>AF008203-1|AAD01418.1| 343|Homo sapiens homeobox protein protein.
Length = 343
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD +QL+ +T L + +QV
Sbjct: 157 RTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQV 199
>AB015671-1|BAA82670.1| 314|Homo sapiens NBPhox protein.
Length = 314
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 18 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
+RT+F QL+ ++ FA H PD ++L+ K L + +QV
Sbjct: 101 IRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQV 144
>BT007364-1|AAP36028.1| 299|Homo sapiens cone-rod homeobox
protein.
Length = 299
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL +++ FA PD ++++ K LP+ +QV
Sbjct: 43 RTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQV 85
>BC053672-1|AAH53672.1| 299|Homo sapiens CRX protein protein.
Length = 299
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL +++ FA PD ++++ K LP+ +QV
Sbjct: 43 RTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQV 85
>BC016664-1|AAH16664.1| 299|Homo sapiens CRX protein protein.
Length = 299
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL +++ FA PD ++++ K LP+ +QV
Sbjct: 43 RTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQV 85
>AF024711-1|AAB88418.1| 299|Homo sapiens cone rod homeobox
protein protein.
Length = 299
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL +++ FA PD ++++ K LP+ +QV
Sbjct: 43 RTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQV 85
>M95929-1|AAA60085.1| 199|Homo sapiens homeobox protein protein.
Length = 199
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL+ ++ F H PDA + L+++ L + +QV
Sbjct: 80 RTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQV 122
>BC074993-1|AAH74993.1| 245|Homo sapiens paired related homeobox 1
protein.
Length = 245
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL+ ++ F H PDA + L+++ L + +QV
Sbjct: 98 RTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQV 140
>U31986-1|AAB08960.1| 326|Homo sapiens Cart-1 protein.
Length = 326
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD +QL+ +T L + +QV
Sbjct: 136 RTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQV 178
>U12259-1|AAA80574.1| 283|Homo sapiens paired box homeotic
protein protein.
Length = 283
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD ++L+Q+ L + +QV
Sbjct: 27 RTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQV 69
>U02368-1|AAC50053.1| 836|Homo sapiens PAX3 protein-forkhead
transcription factor fusion protein.
Length = 836
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD ++L+Q+ L + +QV
Sbjct: 223 RTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQV 265
>BC114363-1|AAI14364.1| 483|Homo sapiens paired box gene 3
(Waardenburg syndrome 1) protein.
Length = 483
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD ++L+Q+ L + +QV
Sbjct: 222 RTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQV 264
>BC101302-1|AAI01303.1| 483|Homo sapiens paired box gene 3
(Waardenburg syndrome 1) protein.
Length = 483
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD ++L+Q+ L + +QV
Sbjct: 222 RTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQV 264
>BC101301-1|AAI01302.1| 484|Homo sapiens paired box gene 3
(Waardenburg syndrome 1) protein.
Length = 484
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD ++L+Q+ L + +QV
Sbjct: 223 RTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQV 265
>BC101300-1|AAI01301.1| 483|Homo sapiens paired box gene 3
(Waardenburg syndrome 1) protein.
Length = 483
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD ++L+Q+ L + +QV
Sbjct: 222 RTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQV 264
>BC101299-1|AAI01300.1| 483|Homo sapiens paired box gene 3
(Waardenburg syndrome 1) protein.
Length = 483
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD ++L+Q+ L + +QV
Sbjct: 222 RTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQV 264
>BC010923-1|AAH10923.1| 326|Homo sapiens cartilage paired-class
homeoprotein 1 protein.
Length = 326
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD +QL+ +T L + +QV
Sbjct: 136 RTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQV 178
>AY633656-1|AAT47737.1| 850|Homo sapiens PAX3/NCOA1 fusion protein
protein.
Length = 850
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD ++L+Q+ L + +QV
Sbjct: 222 RTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQV 264
>AY251280-1|AAP13873.1| 407|Homo sapiens paired box 3 splice
variant PAX3H protein.
Length = 407
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD ++L+Q+ L + +QV
Sbjct: 223 RTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQV 265
>AY251279-1|AAP13872.1| 403|Homo sapiens paired box 3 splice
variant PAX3G protein.
Length = 403
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD ++L+Q+ L + +QV
Sbjct: 223 RTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQV 265
>AJ558236-1|CAD90155.1| 326|Homo sapiens cartilage paired-class
homeoprotein 1 protein.
Length = 326
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL ++ F H PD +QL+ +T L + +QV
Sbjct: 136 RTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQV 178
>U82811-1|AAB88275.1| 185|Homo sapiens HANF protein.
Length = 185
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F +Q+ +++ F +N P + L+QK L + +Q+
Sbjct: 112 RTAFTQNQIEVLENVFRVNCYPGIDIREDLAQKLNLEEDRIQI 154
>U65437-1|AAB39561.1| 79|Homo sapiens homeodomain-containing
protein protein.
Length = 79
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F +Q+ +++ F +N P + L+QK L + +Q+
Sbjct: 6 RTAFTQNQIEVLENVFRVNCYPGIDIREDLAQKLNLEEDRIQI 48
>BC112089-1|AAI12090.1| 185|Homo sapiens HESX homeobox 1 protein.
Length = 185
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F +Q+ +++ F +N P + L+QK L + +Q+
Sbjct: 112 RTAFTQNQIEVLENVFRVNCYPGIDIREDLAQKLNLEEDRIQI 154
>BC093979-1|AAH93979.1| 185|Homo sapiens HESX homeobox 1 protein.
Length = 185
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F +Q+ +++ F +N P + L+QK L + +Q+
Sbjct: 112 RTAFTQNQIEVLENVFRVNCYPGIDIREDLAQKLNLEEDRIQI 154
>BC069515-1|AAH69515.1| 185|Homo sapiens HESX homeobox 1 protein.
Length = 185
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F +Q+ +++ F +N P + L+QK L + +Q+
Sbjct: 112 RTAFTQNQIEVLENVFRVNCYPGIDIREDLAQKLNLEEDRIQI 154
>BC007621-1|AAH07621.1| 354|Homo sapiens orthodenticle homeobox 1
protein.
Length = 354
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL +++ FA PD ++++ K LP+ +QV
Sbjct: 42 RTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQV 84
>AF059734-1|AAC24523.1| 185|Homo sapiens homeodomain transcription
factor protein.
Length = 185
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F +Q+ +++ F +N P + L+QK L + +Q+
Sbjct: 112 RTAFTQNQIEVLENVFRVNCYPGIDIREDLAQKLNLEEDRIQI 154
>AC009501-2|AAY24357.1| 354|Homo sapiens unknown protein.
Length = 354
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL +++ FA PD ++++ K LP+ +QV
Sbjct: 42 RTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQV 84
>BC068569-1|AAH68569.1| 969|Homo sapiens ZHX3 protein protein.
Length = 969
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 24 HHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKR 57
H QL +K F N P +++ L++ TGL R
Sbjct: 503 HEQLSALKGSFCRNQFPGQSEVEHLTKVTGLSTR 536
>BC032579-1|AAH32579.1| 297|Homo sapiens orthodenticle homeobox 2
protein.
Length = 297
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL +++ FA PD ++++ K LP+ +QV
Sbjct: 50 RTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQV 92
>AY038071-1|AAK93901.1| 562|Homo sapiens aristaless-related
homeobox protein ARX protein.
Length = 562
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F +QL ++ F H PD ++L+ + L + +QV
Sbjct: 332 RTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQV 374
>AL022394-6|CAI42887.1| 677|Homo sapiens zinc fingers and
homeoboxes 3 protein.
Length = 677
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 24 HHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKR 57
H QL +K F N P +++ L++ TGL R
Sbjct: 211 HEQLSALKGSFCRNQFPGQSEVEHLTKVTGLSTR 244
>AL022394-5|CAA18538.1| 956|Homo sapiens zinc fingers and
homeoboxes 3 protein.
Length = 956
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 24 HHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKR 57
H QL +K F N P +++ L++ TGL R
Sbjct: 503 HEQLSALKGSFCRNQFPGQSEVEHLTKVTGLSTR 536
>AF298117-1|AAG16243.1| 297|Homo sapiens homeobox protein OTX2
protein.
Length = 297
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL +++ FA PD ++++ K LP+ +QV
Sbjct: 50 RTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQV 92
>AF093138-1|AAD31385.1| 289|Homo sapiens homeodomain protein OTX2
protein.
Length = 289
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RT+F QL +++ FA PD ++++ K LP+ +QV
Sbjct: 42 RTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQV 84
>AB081948-1|BAC65211.1| 956|Homo sapiens transcription factor ZHX3
protein.
Length = 956
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 24 HHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKR 57
H QL +K F N P +++ L++ TGL R
Sbjct: 503 HEQLSALKGSFCRNQFPGQSEVEHLTKVTGLSTR 536
>AB007855-1|BAA23691.3| 1003|Homo sapiens KIAA0395 protein protein.
Length = 1003
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 24 HHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKR 57
H QL +K F N P +++ L++ TGL R
Sbjct: 550 HEQLSALKGSFCRNQFPGQSEVEHLTKVTGLSTR 583
>Z21967-1|CAA79978.1| 105|Homo sapiens mPOU homeobox protein
protein.
Length = 105
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTSF + + +YF N P +++ +++++ + V++V
Sbjct: 42 RTSFTPQAIEALNAYFEKNPLPTGQEITEIAKELNYDREVVRV 84
>Z21966-1|CAA79977.1| 301|Homo sapiens mPOU homeobox protein
protein.
Length = 301
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTSF + + +YF N P +++ +++++ + V++V
Sbjct: 238 RTSFTPQAIEALNAYFEKNPLPTGQEITEIAKELNYDREVVRV 280
>BC107090-1|AAI07091.1| 86|Homo sapiens POU6F1 protein protein.
Length = 86
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTSF + + +YF N P +++ +++++ + V++V
Sbjct: 23 RTSFTPQAIEALNAYFEKNPLPTGQEITEIAKELNYDREVVRV 65
>BC074765-1|AAH74765.3| 301|Homo sapiens POU domain, class 6,
transcription factor 1 protein.
Length = 301
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTSF + + +YF N P +++ +++++ + V++V
Sbjct: 238 RTSFTPQAIEALNAYFEKNPLPTGQEITEIAKELNYDREVVRV 280
>BC051326-1|AAH51326.2| 301|Homo sapiens POU domain, class 6,
transcription factor 1 protein.
Length = 301
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 19 RTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQV 61
RTSF + + +YF N P +++ +++++ + V++V
Sbjct: 238 RTSFTPQAIEALNAYFEKNPLPTGQEITEIAKELNYDREVVRV 280
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.321 0.132 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,748,566
Number of Sequences: 224733
Number of extensions: 124349
Number of successful extensions: 622
Number of sequences better than 10.0: 209
Number of HSP's better than 10.0 without gapping: 209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 394
Number of HSP's gapped (non-prelim): 228
length of query: 65
length of database: 73,234,838
effective HSP length: 44
effective length of query: 21
effective length of database: 63,346,586
effective search space: 1330278306
effective search space used: 1330278306
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 57 (27.1 bits)
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