Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002123-TA|BGIBMGA002123-PA|IPR008973|C2
calcium/lipid-binding region, CaLB, IPR000008|C2 calcium-dependent
membrane targeting
(995 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 35 0.064
SPCC4G3.09c |gyp3||GTPase activating protein Gyp3|Schizosaccharo... 33 0.20
SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces po... 31 0.79
SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10 |... 31 1.0
SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 29 2.4
SPCC1259.14c |meu27||S. pombe specific UPF0300 family protein 5|... 29 3.2
SPAC23H4.12 |alp13||Clr6 histone deacetylase complex subunit Alp... 29 4.2
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 29 4.2
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 28 5.6
SPBC660.14 |mik1||mitotic inhibitor kinase Mik1|Schizosaccharomy... 28 5.6
SPAC23G3.12c |||serine protease |Schizosaccharomyces pombe|chr 1... 28 7.4
SPAC1486.03c |||RNA-binding splicing factor|Schizosaccharomyces ... 28 7.4
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 28 7.4
SPBC18H10.07 |||WW domain-binding protein 4 |Schizosaccharomyces... 28 7.4
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 28 7.4
SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 9.8
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 34.7 bits (76), Expect = 0.064
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 534 PTEDDPSTCTSEPSMSCDKKNPISEEIEEELQ-----FHNDYFKTEREERISLNNSFRSV 588
P P PS+S D + +SE++ ++ F DY + + + SL ++ +S
Sbjct: 233 PMNSPPLDMEPLPSISMDASDSVSEQLVKDASLPSGPFSTDYLENGSDLKRSLGHNQKSD 292
Query: 589 RSAKTTEPSHSLDSTKTRHGSLRYDFKSSASL 620
R +K P H + + + +F SS +L
Sbjct: 293 RVSKDVSPQHQANPSTLNNPLKTQNFDSSKNL 324
>SPCC4G3.09c |gyp3||GTPase activating protein
Gyp3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 635
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/50 (28%), Positives = 28/50 (56%)
Query: 553 KNPISEEIEEELQFHNDYFKTEREERISLNNSFRSVRSAKTTEPSHSLDS 602
K P E+++ L +ND + + ++ +NN S S+ ++E H+LD+
Sbjct: 37 KTPSDYELDDVLDLYNDTTEDDADDADDVNNYIMSPSSSLSSESEHALDA 86
>SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 31.1 bits (67), Expect = 0.79
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 302 WQNRQLELVSNHVGLLKHYGHAKKCMESIDDVYFKASCRKDDASLEFAP 350
+++R++ H L KHY A K + I+D +AS ++++ E+ P
Sbjct: 434 FESRKIWFPVTHNILAKHYTQATKAKQEIEDQQRQASAAREESHTEWKP 482
>SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 791
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Query: 541 TCTSEPSMSC-DKKNPISEEI-----EEELQFHNDYFKTEREERISLNNSFRSVRSAKTT 594
TC+S P+ C + K P S +EL++ N +T + E I N F++V +
Sbjct: 648 TCSSPPNNECFNDKEPDSSSSTLISDRQELEYRNPNAETVKLEEIPYNKFFKTVEKNEAY 707
Query: 595 EPS 597
PS
Sbjct: 708 NPS 710
>SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 682
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Query: 127 GDTMIRLVVYDVKEPVSDTTVPMGFTSMKLSMIQEAQRLRVSLCTKEEKT---IGFVTLN 183
G TM P + +PM T +S +Q +Q + V+ + + T ++
Sbjct: 274 GSTMFASSNQSAAHPDGNNALPMDNTHANISYMQSSQSMPVNSYSYDRYTPNQPSYLESK 333
Query: 184 GWSLEPSYTGTSPVHSNDRSIEIPQKV 210
+ +PSYT P++S + +PQ++
Sbjct: 334 PGNHQPSYTSEQPMYS---TASVPQQI 357
>SPCC1259.14c |meu27||S. pombe specific UPF0300 family protein
5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 736
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 399 VKDINSSKAELQSITNKIQVEYDNVVALRRLRDELSGDMDRIIMLLQAKQIEEVQAILDG 458
+KDI S +EL ++ Q+ Y L + ++ I +L++K E QAI++G
Sbjct: 276 LKDIKQS-SELSDLSLSSQILYPESTTLSEISPIYDSEL-AIENILESKCFENEQAIIEG 333
Query: 459 IKN 461
+K+
Sbjct: 334 VKD 336
>SPAC23H4.12 |alp13||Clr6 histone deacetylase complex subunit
Alp13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 337
Score = 28.7 bits (61), Expect = 4.2
Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 6/114 (5%)
Query: 553 KNPISEEIEEE--LQFHNDYFKTEREERISLNNSFRSVRSAKTTEPSHSLDSTKTRHGSL 610
KN E +E++ LQ+ + KT++E + + ++ + S K+ + DST +
Sbjct: 44 KNSWDEWVEQDRILQWTEENLKTQKELKNAAISTRQKPTSKKSASSTSKHDSTGVKTSGK 103
Query: 611 RYDFKSSASLEQVSYRCLVNNNKVDKRKTP---QGISDALDDVSPLDQTTRDNN 661
R S+ +++ S+ L + K K ++P Q D D + T +NN
Sbjct: 104 RSRESSTVTVDGDSHE-LPSRIKTQKSESPIPQQVKRDGTTDAKNEETTKPENN 156
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/57 (26%), Positives = 24/57 (42%)
Query: 595 EPSHSLDSTKTRHGSLRYDFKSSASLEQVSYRCLVNNNKVDKRKTPQGISDALDDVS 651
E H + TK++H S + SS LE S L + + + S A+ +S
Sbjct: 316 EAIHKILDTKSKHSSSKSSHDSSQGLESTSSIALNPTSSISSTSSSSSTSSAISTIS 372
>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 745
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 894 DNLDRLNKYYHKFCKVFPQ-----DLVAITRGV----MTFRKPSSRS--KPLEEVMENLR 942
+ L+ ++ YYH+ C +FPQ +VA+ V +T +PS+ S L+E++E+++
Sbjct: 208 EKLEIIHPYYHRICTLFPQMNDWDKVVALKTLVRYARLTLPEPSTPSTHSDLKELLESIK 267
Query: 943 ISVHKKVP 950
+P
Sbjct: 268 SCFFSLLP 275
>SPBC660.14 |mik1||mitotic inhibitor kinase Mik1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 581
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 95 PCIEYGSTEVVEMCSNPSFSKTILFRASDGLNGD 128
P + YGS +++E C P S+ I +S N D
Sbjct: 216 PSLSYGSEDLLEFCETPCKSQPIFLSSSHVNNWD 249
>SPAC23G3.12c |||serine protease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 996
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 15 AIQLASYDNMHSRVQDLKDRLNAIRPVIDITNYRLQKGIFVD 56
A+ L Y SR D+K L PV+ T RLQ G+ V+
Sbjct: 697 ALWLTHYGEQTSRGTDVKYHLGLASPVVLSTLRRLQSGVNVN 738
>SPAC1486.03c |||RNA-binding splicing factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 797
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/33 (33%), Positives = 22/33 (66%)
Query: 884 ETIPQYHSNSDNLDRLNKYYHKFCKVFPQDLVA 916
ET+ Q+ + + N D +++Y + VFP+DL++
Sbjct: 620 ETLYQWLTEAPNFDEASEWYTWWKSVFPKDLLS 652
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 122 SDGLNGDTMIRLVVYDVKEPVSDTTVPMGFTSMKLSMIQEAQRLRVSLCTKEEK 175
S+GL+ + L++Y+ + +SD +G+T++ L I + ++ L +K K
Sbjct: 913 SNGLSRTVSLNLLLYE-RIQLSDALFQLGYTTVSLGFIMQNLKVIKGLFSKSSK 965
>SPBC18H10.07 |||WW domain-binding protein 4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 224
Score = 27.9 bits (59), Expect = 7.4
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 893 SDNLDRLNKYYHKFCKVFPQDLVAITRG-VMTFRKPSSRSKPLEEV-MENLRISVHKKVP 950
+D + KYY K+C++F +D R T++ + K ++++ NL + +++
Sbjct: 2 ADYWKSIPKYYCKYCQIFVKDTPFARRSHEQTYKHQDAIKKVMDDIHRSNL---LRQELE 58
Query: 951 RNYEVIQLASMAVRQMNGNAPIASFRKQAKIN--LSPLNVKHTL 992
+N + + A+ A ++ +AS+ K K + L P K TL
Sbjct: 59 KNLSIPKSAT-ATTASAVSSELASYEKPKKEHPKLRPSKKKATL 101
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Query: 590 SAKTTEPSHSLDSTKTRHGSLR------YDFKSSASLEQVSYRCLVNNNKVDKRKTPQGI 643
S T S +L+ T T+ G + Y+++ S QVS ++N N +K +
Sbjct: 1483 SESTDGLSDALNITPTKKGEVSSKAKKGYNYEKRRSGRQVSDSYVLNKNSKNKSNKGRSA 1542
Query: 644 SDALDDVSPLDQTTRDNNF 662
S D S L+ + R F
Sbjct: 1543 SYTFSDPSSLEDSNRQKPF 1561
>SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/86 (22%), Positives = 34/86 (39%)
Query: 536 EDDPSTCTSEPSMSCDKKNPISEEIEEELQFHNDYFKTEREERISLNNSFRSVRSAKTTE 595
++ S T +P +K + + + FH + + + + FR+V +
Sbjct: 106 QNGKSRDTEKPPSMKEKDLSSNSSSQHDKAFHERVDQGKNKSSTTKYQEFRTVADYREFS 165
Query: 596 PSHSLDSTKTRHGSLRYDFKSSASLE 621
P S++S K G KSS S E
Sbjct: 166 PGQSVNSLKPNSGDEVPSTKSSTSSE 191
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.132 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,431,336
Number of Sequences: 5004
Number of extensions: 185918
Number of successful extensions: 542
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 530
Number of HSP's gapped (non-prelim): 19
length of query: 995
length of database: 2,362,478
effective HSP length: 80
effective length of query: 915
effective length of database: 1,962,158
effective search space: 1795374570
effective search space used: 1795374570
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 58 (27.5 bits)
- SilkBase 1999-2023 -