Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002123-TA|BGIBMGA002123-PA|IPR008973|C2
calcium/lipid-binding region, CaLB, IPR000008|C2 calcium-dependent
membrane targeting
(995 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0027 - 19014033-19014127,19014219-19014315,19014560-190146... 40 0.007
04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036 32 2.0
01_03_0259 - 14312197-14312259,14312384-14312456,14312651-143127... 32 2.0
10_08_0911 - 21499196-21499236,21499368-21499488,21499665-214997... 32 2.6
08_02_1393 - 26706198-26706592,26707055-26707301,26707407-267082... 31 6.1
08_02_0986 + 23328056-23328145,23328289-23329227,23329313-233295... 30 8.0
04_04_0076 + 22558105-22558261,22558356-22558405,22559837-225600... 30 8.0
>02_04_0027 -
19014033-19014127,19014219-19014315,19014560-19014673,
19014759-19014923,19015169-19015306,19015402-19015478,
19015572-19015686,19015756-19015861,19016182-19016243,
19016407-19016472,19016628-19016810,19017359-19017415,
19017848-19017896,19017983-19018131,19019203-19019250,
19020061-19020201
Length = 553
Score = 40.3 bits (90), Expect = 0.007
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 64 ELALSCDNLLCDAHGKPPSPMVVIYAKNPKGPCIEYGSTEVVEMCSNPSFSKTI 117
EL+LS NL +PMV++Y+K+ +G E G TEV+ NPS++ I
Sbjct: 47 ELSLSASNLGDQEFFTKSNPMVIVYSKSKEGALEELGRTEVILNSLNPSWNARI 100
>04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036
Length = 762
Score = 32.3 bits (70), Expect = 2.0
Identities = 52/339 (15%), Positives = 132/339 (38%), Gaps = 19/339 (5%)
Query: 382 HTHKTERSGGLIRLVQHVKDINSSKA-ELQSITNKIQVEYDNVVALRRLRDELSGDMDRI 440
H K E ++L ++ +A EL+ + +++VE +V R +EL G
Sbjct: 274 HIRKLEEENSGLKLELEKANVAEQRAVELEGVVEQLEVEIADVKKARARSEELLGKWKTK 333
Query: 441 IMLLQAKQIEEVQAILDGIKNKAKSILALWDPTAVEETLSYIGWPKDYGYDESDGQTMST 500
+ L+ + E Q+ + K +S+ + + TL K+ + + S
Sbjct: 334 ALELEVRLEEADQSNI----LKGESLESAMKELDAKMTLLQ---EKESEIEALQDKVRSL 386
Query: 501 ILRLTEQMNLFEAVNSDCETLDVXXXXXXKEASPTEDD---PSTCTSEPSMSCDKKNPIS 557
+ +Q F + + + L + + E+D +SE ++KN ++
Sbjct: 387 EDEVAKQKEDFHTADKEADELRLEIEDLRLKLEAAEEDLNNDKIASSEMETLIEQKNMLA 446
Query: 558 EEIEEELQFHNDYFKTEREERISLNNSFRSVRSA--KTTEPSHSLDSTKTRHGSLRYDFK 615
+E+E K + +L+ +R A K + +D + + L +
Sbjct: 447 KELEASKAEVEKIKKAMEGQASALHEMSAQLRVAQEKYLDKQEEIDRARAQVEELNVSLQ 506
Query: 616 SSASLEQVSYRCLVNNNKVDKRKTPQGISDALDDVSPLDQTTRDNNFAYLKAVGTAIEEA 675
++ + SY +++ +K + + + + + +++ ++ + EE
Sbjct: 507 NT----KESYEVMLDEANYEKVCLKKSVERMEAETKSASEEWQSKELSFVNSIKKSEEEI 562
Query: 676 LASLIRF--VVEIIRTENGDHTEEQMDVIRAQAELLKKN 712
+ + + +E ++ + ++ E Q + +A+L++ N
Sbjct: 563 INARAQMDKTLEAVKGKESENAELQEKLKHLEAQLMEAN 601
>01_03_0259 -
14312197-14312259,14312384-14312456,14312651-14312754,
14313073-14313192,14313278-14313364,14313925-14314023,
14314110-14314203,14314298-14314368,14315258-14316040
Length = 497
Score = 32.3 bits (70), Expect = 2.0
Identities = 12/39 (30%), Positives = 26/39 (66%)
Query: 658 RDNNFAYLKAVGTAIEEALASLIRFVVEIIRTENGDHTE 696
RD F +L ++G+ +AL +L R++V+ ++ ++G H +
Sbjct: 397 RDKKFQFLDSLGSMDMKALRTLARYLVDEVKDKSGQHID 435
>10_08_0911 -
21499196-21499236,21499368-21499488,21499665-21499789,
21500187-21500418,21500488-21500668,21501342-21501438,
21501641-21501779,21502024-21502351,21502890-21503137,
21503270-21503543,21504200-21504291,21504451-21504521,
21505091-21505181,21506526-21507380,21507482-21507594,
21508007-21508074,21508655-21508835,21509084-21509186,
21509273-21509379,21510046-21511584,21511661-21511771,
21511856-21511908,21511988-21512063,21512147-21512366,
21512477-21512901,21513193-21513372,21513503-21515474
Length = 2680
Score = 31.9 bits (69), Expect = 2.6
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 601 DSTKTRHGSLRYDFKSSASLEQVSYRCLVNNNKVDKRKTPQGISD 645
D + GS D KS+ +LE VS RC+V+ +KT + D
Sbjct: 190 DKAEQAVGSTLSDRKSNYTLESVSERCIVSGRSSSPKKTSESCPD 234
>08_02_1393 -
26706198-26706592,26707055-26707301,26707407-26708249,
26708420-26709091
Length = 718
Score = 30.7 bits (66), Expect = 6.1
Identities = 12/35 (34%), Positives = 24/35 (68%)
Query: 598 HSLDSTKTRHGSLRYDFKSSASLEQVSYRCLVNNN 632
H+L + H ++ Y F S+A+LEQV++R + +++
Sbjct: 357 HNLFPALSEHDAMMYLFHSNANLEQVTFRAMCDHD 391
>08_02_0986 +
23328056-23328145,23328289-23329227,23329313-23329570,
23330384-23330692
Length = 531
Score = 30.3 bits (65), Expect = 8.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 687 IRTENGDHTEEQMDVIRAQAELLKKNVDG 715
IR+ NG H E +D+++A+ ++ +DG
Sbjct: 363 IRSRNGIHAESTLDILKAEGDIYVAMIDG 391
>04_04_0076 +
22558105-22558261,22558356-22558405,22559837-22560044,
22560112-22560237,22560469-22560567,22560729-22561405,
22561483-22561731,22561808-22561936,22562021-22562089,
22562183-22562256,22563086-22563098,22563361-22563468,
22563541-22563651,22563725-22563811,22564043-22564068,
22564840-22564906,22565123-22565212,22565295-22565387,
22565515-22565604,22565699-22565761,22566349-22566447
Length = 894
Score = 30.3 bits (65), Expect = 8.0
Identities = 28/148 (18%), Positives = 63/148 (42%), Gaps = 9/148 (6%)
Query: 295 VGEICSQWQNRQLELVSNHVGLLKHYGHAKKCMESIDD-VYFKASCRKDDASLEFAPVNL 353
+ E+ S + + EL H + H E D V+ + A +F
Sbjct: 290 LNELLSGFTVKVTELDKEHTSISSHVTQLISSFERYDGKVHEEKMLMIKSAKDKFE---- 345
Query: 354 HLQRMWVHNDTLNKTGFHDIVTAGAFAAHTHKTERSGGLIRLVQHVKDINSSKAELQSIT 413
HLQ +V+ + N +I + KT+ I +VQHV++ ++ +++ +
Sbjct: 346 HLQNQYVNLISENNALQTEIEELKSRIIELQKTQE----IVMVQHVEECQVAEDKIRRLE 401
Query: 414 NKIQVEYDNVVALRRLRDELSGDMDRII 441
++ ++ N+ L ++ +L G + +++
Sbjct: 402 SEAEISASNISQLEKVASDLEGRVQKLL 429
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.132 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,226,685
Number of Sequences: 37544
Number of extensions: 1094658
Number of successful extensions: 2750
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2743
Number of HSP's gapped (non-prelim): 9
length of query: 995
length of database: 14,793,348
effective HSP length: 89
effective length of query: 906
effective length of database: 11,451,932
effective search space: 10375450392
effective search space used: 10375450392
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 65 (30.3 bits)
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