GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002123-TA|BGIBMGA002123-PA|IPR008973|C2
calcium/lipid-binding region, CaLB, IPR000008|C2 calcium-dependent
membrane targeting
         (995 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    28   1.4  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    27   3.2  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    26   4.2  
DQ013848-1|AAY40257.1|  304|Anopheles gambiae CYP325D1 protein.        26   5.6  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 27.9 bits (59), Expect = 1.4
 Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 9/89 (10%)

Query: 390 GGLIRLV-QHVKDINSSKAELQSITNKIQVEYDNVVAL--RRLRDELSGDMD---RIIML 443
           GG  +L  +H + +++S+AELQ I     ++ DN + +  + L   L  D D   +    
Sbjct: 189 GGSYKLKNEHGQTVSTSRAELQKILLAFNIQVDNPICVLNQDLARSLLKDSDESKQYTFF 248

Query: 444 LQAKQIEEVQAILDG---IKNKAKSILAL 469
            +A QI+ ++  L+    I  KA+ +L +
Sbjct: 249 SKATQIDTIKQKLNECAVIAKKARDVLVV 277


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 26.6 bits (56), Expect = 3.2
 Identities = 18/52 (34%), Positives = 25/52 (48%)

Query: 428 RLRDELSGDMDRIIMLLQAKQIEEVQAILDGIKNKAKSILALWDPTAVEETL 479
           RLR +LS   D  +ML + +QI     I   I    + ++   DP A EE L
Sbjct: 245 RLRIQLSCTADSTLMLQEVQQIIGNAGIARVITEMGEILITHIDPLASEEDL 296


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 26.2 bits (55), Expect = 4.2
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 9   RTLWLKAIQLASYDNMHSRVQDLKDRLNAIRPVI 42
           RT+W K   L   D  H+ + DL  R  + R +I
Sbjct: 412 RTIWAKGTILGPIDRTHNGMADLATRRASSRGII 445


>DQ013848-1|AAY40257.1|  304|Anopheles gambiae CYP325D1 protein.
          Length = 304

 Score = 25.8 bits (54), Expect = 5.6
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 103 EVVEMCSNPSFSKTILFRASDGLNGDTMIRLVVYDVKEPVSDTTV-PMGFTSMKLSMIQE 161
           E  E   +P+    +L    DG   DT I   +Y +    +DTT   +G T + L+M   
Sbjct: 116 EFYEANDSPAMLDRLLSVNEDGPLSDTEIVQNIYSIVGAGNDTTAHSLGHTCLFLAMHPA 175

Query: 162 AQR 164
            QR
Sbjct: 176 VQR 178


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.132    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 965,944
Number of Sequences: 2123
Number of extensions: 37778
Number of successful extensions: 76
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 73
Number of HSP's gapped (non-prelim): 4
length of query: 995
length of database: 516,269
effective HSP length: 71
effective length of query: 924
effective length of database: 365,536
effective search space: 337755264
effective search space used: 337755264
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)