GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002122-TA|BGIBMGA002122-PA|undefined
         (51 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   0.23 
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   0.23 
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   0.94 
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    19   5.0  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory
          receptor candidate 39 protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 0.23
 Identities = 11/32 (34%), Positives = 19/32 (59%)

Query: 12 ASQTSQNFDREGVLVMRERQDGFFRRSEDVVV 43
          AS TS N D E    + +R D F++ ++ ++V
Sbjct: 27 ASPTSANPDEEPDPELLDRYDNFYQTTKSLLV 58


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory
          receptor candidate 10 protein.
          Length = 437

 Score = 23.0 bits (47), Expect = 0.23
 Identities = 11/32 (34%), Positives = 19/32 (59%)

Query: 12 ASQTSQNFDREGVLVMRERQDGFFRRSEDVVV 43
          AS TS N D E    + +R D F++ ++ ++V
Sbjct: 27 ASPTSANPDEEPDPELLDRYDNFYQTTKSLLV 58


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 0.94
 Identities = 9/32 (28%), Positives = 18/32 (56%)

Query: 3   YNKQELVALASQTSQNFDREGVLVMRERQDGF 34
           Y+ +E VAL  Q +++ +  G+++     D F
Sbjct: 328 YDDEESVALKVQFAKDHNMAGLMIWTVDMDDF 359


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 18.6 bits (36), Expect = 5.0
 Identities = 7/32 (21%), Positives = 17/32 (53%)

Query: 3   YNKQELVALASQTSQNFDREGVLVMRERQDGF 34
           Y+  + +A+  Q +++ +  GV++     D F
Sbjct: 337 YDNPKSIAIKVQYAKSLNLAGVMIWSIETDDF 368


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.131    0.346 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9286
Number of Sequences: 317
Number of extensions: 204
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 51
length of database: 114,650
effective HSP length: 32
effective length of query: 19
effective length of database: 104,506
effective search space:  1985614
effective search space used:  1985614
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.6 bits)
S2: 34 (17.8 bits)