GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002122-TA|BGIBMGA002122-PA|undefined
         (51 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    21   3.2  
AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenin...    20   9.8  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 13/47 (27%), Positives = 21/47 (44%)

Query: 5   KQELVALASQTSQNFDREGVLVMRERQDGFFRRSEDVVVTNYALAKE 51
           +QE+  L S+  +       L  R+ + GF RRS   +V      K+
Sbjct: 486 QQEVRGLRSELDRRNAHRWELQYRDPEPGFDRRSVKGMVAKLVTVKD 532


>AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenine
          transaminase protein.
          Length = 396

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 4  NKQELVALASQTSQNFDREGVLVMRERQDG 33
          +K+ L A+ +    NF  E    M E +DG
Sbjct: 30 SKRVLTAMTNTVLSNFHAELFRTMDEVKDG 59


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.131    0.346 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,956
Number of Sequences: 2123
Number of extensions: 909
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 51
length of database: 516,269
effective HSP length: 31
effective length of query: 20
effective length of database: 450,456
effective search space:  9009120
effective search space used:  9009120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.9 bits)
S2: 39 (19.8 bits)