GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002122-TA|BGIBMGA002122-PA|undefined
         (51 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122099-1|AAM52611.1|  199|Drosophila melanogaster GH08220p pro...    50   4e-07
AE014298-2016|AAN09581.1|  199|Drosophila melanogaster CG33248-P...    50   4e-07

>AY122099-1|AAM52611.1|  199|Drosophila melanogaster GH08220p
          protein.
          Length = 199

 Score = 50.0 bits (114), Expect = 4e-07
 Identities = 22/46 (47%), Positives = 33/46 (71%)

Query: 1  MRYNKQELVALASQTSQNFDREGVLVMRERQDGFFRRSEDVVVTNY 46
          MR+NK EL +LAS  +  FD+EG+L++ +RQ+GF  RS +V V  +
Sbjct: 1  MRFNKPELNSLASNPATRFDKEGLLIITDRQEGFLWRSSEVRVERW 46


>AE014298-2016|AAN09581.1|  199|Drosophila melanogaster CG33248-PA
          protein.
          Length = 199

 Score = 50.0 bits (114), Expect = 4e-07
 Identities = 22/46 (47%), Positives = 33/46 (71%)

Query: 1  MRYNKQELVALASQTSQNFDREGVLVMRERQDGFFRRSEDVVVTNY 46
          MR+NK EL +LAS  +  FD+EG+L++ +RQ+GF  RS +V V  +
Sbjct: 1  MRFNKPELNSLASNPATRFDKEGLLIITDRQEGFLWRSSEVRVERW 46


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.319    0.131    0.346 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,968,794
Number of Sequences: 52641
Number of extensions: 46383
Number of successful extensions: 80
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78
Number of HSP's gapped (non-prelim): 2
length of query: 51
length of database: 24,830,863
effective HSP length: 32
effective length of query: 19
effective length of database: 23,146,351
effective search space: 439780669
effective search space used: 439780669
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)