GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002121-TA|BGIBMGA002121-PA|undefined
         (166 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    25   0.92 
Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS...    25   1.2  

>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 25.4 bits (53), Expect = 0.92
 Identities = 12/50 (24%), Positives = 23/50 (46%)

Query: 48  ETPNFPEGPMSQTKKFQALKENIIAGSNPISHRMLLFPSVMIFPELFCVL 97
           +TP FP+          ALK  I        +R++    +++F E++ +L
Sbjct: 303 DTPEFPDKRREYKLARNALKREIKRTKKATWYRLVNMSDIILFGEVYVIL 352


>Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS11
           protein.
          Length = 151

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 10/19 (52%), Positives = 15/19 (78%)

Query: 56  PMSQTKKFQALKENIIAGS 74
           P+S+T +F  LKE+ +AGS
Sbjct: 126 PLSKTVRFNVLKESKMAGS 144


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.140    0.428 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,809
Number of Sequences: 2123
Number of extensions: 6208
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 2
length of query: 166
length of database: 516,269
effective HSP length: 59
effective length of query: 107
effective length of database: 391,012
effective search space: 41838284
effective search space used: 41838284
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 45 (22.2 bits)