GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002121-TA|BGIBMGA002121-PA|undefined
         (166 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC012225-1|AAH12225.1|  543|Homo sapiens NO145 protein protein.        35   0.12 
AM293674-1|CAL25570.1|  812|Homo sapiens 145 kDa nucleolar prote...    35   0.12 
AL357497-2|CAI16226.1|  812|Homo sapiens novel protein similar t...    35   0.12 
AL121955-1|CAI22075.1|  812|Homo sapiens novel protein similar t...    35   0.12 
X95677-1|CAA64980.1|  299|Homo sapiens argBPIB protein.                29   7.8  
U23435-1|AAA92289.1|  401|Homo sapiens Abl interactor 2 protein.       29   7.8  
AF260261-1|AAF70308.1|  513|Homo sapiens Abl-interactor protein ...    29   7.8  

>BC012225-1|AAH12225.1|  543|Homo sapiens NO145 protein protein.
          Length = 543

 Score = 35.1 bits (77), Expect = 0.12
 Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 2/63 (3%)

Query: 16  LVTYGVNEETGEPMVNNPTVSFFGTPRPIPPMETPNFPEGPMSQTKKFQALKENIIAGSN 75
           L+T  +N+++  P++  P        +P+PP   P+FP+ P S  +K    + N  + ++
Sbjct: 189 LITLHLNDQSEPPVIGEPASD--SHLQPVPPFGVPDFPQQPKSHYRKHLFSESNQDSSTS 246

Query: 76  PIS 78
            +S
Sbjct: 247 ELS 249


>AM293674-1|CAL25570.1|  812|Homo sapiens 145 kDa nucleolar protein
           protein.
          Length = 812

 Score = 35.1 bits (77), Expect = 0.12
 Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 2/63 (3%)

Query: 16  LVTYGVNEETGEPMVNNPTVSFFGTPRPIPPMETPNFPEGPMSQTKKFQALKENIIAGSN 75
           L+T  +N+++  P++  P        +P+PP   P+FP+ P S  +K    + N  + ++
Sbjct: 458 LITLHLNDQSEPPVIGEPASD--SHLQPVPPFGVPDFPQQPKSHYRKHLFSESNQDSSTS 515

Query: 76  PIS 78
            +S
Sbjct: 516 ELS 518


>AL357497-2|CAI16226.1|  812|Homo sapiens novel protein similar to
           synaptonemal complex protein 2 (SYCP2) protein.
          Length = 812

 Score = 35.1 bits (77), Expect = 0.12
 Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 2/63 (3%)

Query: 16  LVTYGVNEETGEPMVNNPTVSFFGTPRPIPPMETPNFPEGPMSQTKKFQALKENIIAGSN 75
           L+T  +N+++  P++  P        +P+PP   P+FP+ P S  +K    + N  + ++
Sbjct: 458 LITLHLNDQSEPPVIGEPASD--SHLQPVPPFGVPDFPQQPKSHYRKHLFSESNQDSSTS 515

Query: 76  PIS 78
            +S
Sbjct: 516 ELS 518


>AL121955-1|CAI22075.1|  812|Homo sapiens novel protein similar to
           synaptonemal complex protein 2 (SYCP2) protein.
          Length = 812

 Score = 35.1 bits (77), Expect = 0.12
 Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 2/63 (3%)

Query: 16  LVTYGVNEETGEPMVNNPTVSFFGTPRPIPPMETPNFPEGPMSQTKKFQALKENIIAGSN 75
           L+T  +N+++  P++  P        +P+PP   P+FP+ P S  +K    + N  + ++
Sbjct: 458 LITLHLNDQSEPPVIGEPASD--SHLQPVPPFGVPDFPQQPKSHYRKHLFSESNQDSSTS 515

Query: 76  PIS 78
            +S
Sbjct: 516 ELS 518


>X95677-1|CAA64980.1|  299|Homo sapiens argBPIB protein.
          Length = 299

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)

Query: 22  NEETGEPMVNNPTVSFFGTPRPIPPMETPNFPEGP 56
           N+  G P  +   VS   TP P PP+E P F E P
Sbjct: 171 NQMNGGPFYSQNPVS--DTPPPPPPVEEPVFDESP 203


>U23435-1|AAA92289.1|  401|Homo sapiens Abl interactor 2 protein.
          Length = 401

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)

Query: 22  NEETGEPMVNNPTVSFFGTPRPIPPMETPNFPEGP 56
           N+  G P  +   VS   TP P PP+E P F E P
Sbjct: 273 NQMNGGPFYSQNPVS--DTPPPPPPVEEPVFDESP 305


>AF260261-1|AAF70308.1|  513|Homo sapiens Abl-interactor protein 2b
           protein.
          Length = 513

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)

Query: 22  NEETGEPMVNNPTVSFFGTPRPIPPMETPNFPEGP 56
           N+  G P  +   VS   TP P PP+E P F E P
Sbjct: 385 NQMNGGPFYSQNPVS--DTPPPPPPVEEPVFDESP 417


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.324    0.140    0.428 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,437,682
Number of Sequences: 224733
Number of extensions: 1022757
Number of successful extensions: 2527
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2525
Number of HSP's gapped (non-prelim): 9
length of query: 166
length of database: 73,234,838
effective HSP length: 85
effective length of query: 81
effective length of database: 54,132,533
effective search space: 4384735173
effective search space used: 4384735173
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 62 (29.1 bits)