GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002121-TA|BGIBMGA002121-PA|undefined
         (166 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF145665-1|AAD38640.1|  213|Drosophila melanogaster BcDNA.GH1111...    54   1e-07
AE014296-400|AAF47601.1|  213|Drosophila melanogaster CG1927-PA ...    54   1e-07
AY071130-1|AAL48752.1|  303|Drosophila melanogaster RE17477p pro...    31   0.78 
AE014297-1895|AAN13618.1|  303|Drosophila melanogaster CG7390-PB...    31   0.78 
AE014297-1894|AAF55095.1|  303|Drosophila melanogaster CG7390-PA...    31   0.78 
AB029490-1|BAA92938.1|  303|Drosophila melanogaster senescence m...    31   0.78 
X81194-1|CAA57066.1|  436|Drosophila melanogaster TIScc1 protein.      30   1.8  
U13397-1|AAA62666.1|  437|Drosophila melanogaster DTIS11 protein...    30   1.8  
AE014298-1801|AAN09314.1|  408|Drosophila melanogaster CG4070-PB...    30   1.8  
AE014298-1800|AAF48194.2|  436|Drosophila melanogaster CG4070-PA...    30   1.8  
AY051659-1|AAK93083.1| 1390|Drosophila melanogaster LD15203p pro...    29   3.2  
AF151375-1|AAF03776.1| 1390|Drosophila melanogaster Rho-kinase p...    29   3.2  
AE014298-2432|AAF48631.1| 1390|Drosophila melanogaster CG9774-PA...    29   3.2  
U51052-1|AAB01151.1|  558|Drosophila melanogaster alpha esterase...    29   4.2  
AY121675-1|AAM52002.1|  574|Drosophila melanogaster RE24825p pro...    29   4.2  
AE014297-620|AAF54012.2|  574|Drosophila melanogaster CG1121-PA ...    29   4.2  

>AF145665-1|AAD38640.1|  213|Drosophila melanogaster BcDNA.GH11112
           protein.
          Length = 213

 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 4/112 (3%)

Query: 41  PRPIPPMETPNFPEGPMSQTKKFQALKENIIAGSNPISHRMLLFPSVMIFPELFCVLLLI 100
           P   P   TP +      Q      +  NII G N   + + L P++  +  +    L +
Sbjct: 83  PNRAPKKVTPGYEREDYCQ---MDGVSNNIILGYNRNPYLLFLVPTLFCYNFVIGATLAL 139

Query: 101 LEVYLHVXXXXXXXXXXDQNLYYRSPFHVVTSTFCGACRESELASRIGQMQD 152
           +E+ LH+           ++LY+RSP +V++S FC  CR +E  S+  ++ D
Sbjct: 140 IEIVLHMMSHHRNGLTMQKSLYFRSPLNVLSSQFCAICR-TETDSKYNRIFD 190


>AE014296-400|AAF47601.1|  213|Drosophila melanogaster CG1927-PA
           protein.
          Length = 213

 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 4/112 (3%)

Query: 41  PRPIPPMETPNFPEGPMSQTKKFQALKENIIAGSNPISHRMLLFPSVMIFPELFCVLLLI 100
           P   P   TP +      Q      +  NII G N   + + L P++  +  +    L +
Sbjct: 83  PNRAPKKVTPGYEREDYCQ---MDGVSNNIILGYNRNPYLLFLVPTLFCYNFVIGATLAL 139

Query: 101 LEVYLHVXXXXXXXXXXDQNLYYRSPFHVVTSTFCGACRESELASRIGQMQD 152
           +E+ LH+           ++LY+RSP +V++S FC  CR +E  S+  ++ D
Sbjct: 140 IEIVLHMMSHHRNGLTMQKSLYFRSPLNVLSSQFCAICR-TETDSKYNRIFD 190


>AY071130-1|AAL48752.1|  303|Drosophila melanogaster RE17477p
           protein.
          Length = 303

 Score = 31.1 bits (67), Expect = 0.78
 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 5/49 (10%)

Query: 7   FFFDDETGELVTYGVNEETGEPMVNNPTVSFFGTPRPIPPMETPNFPEG 55
           +F D    E++ Y  N+ TG   V+NP V F    R I P E P FP+G
Sbjct: 172 YFIDTNNHEVLAYDYNQSTG--AVSNPKVIF--DLRKIRP-EGPLFPDG 215


>AE014297-1895|AAN13618.1|  303|Drosophila melanogaster CG7390-PB,
           isoform B protein.
          Length = 303

 Score = 31.1 bits (67), Expect = 0.78
 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 5/49 (10%)

Query: 7   FFFDDETGELVTYGVNEETGEPMVNNPTVSFFGTPRPIPPMETPNFPEG 55
           +F D    E++ Y  N+ TG   V+NP V F    R I P E P FP+G
Sbjct: 172 YFIDTNNHEVLAYDYNQSTG--AVSNPKVIF--DLRKIRP-EGPLFPDG 215


>AE014297-1894|AAF55095.1|  303|Drosophila melanogaster CG7390-PA,
           isoform A protein.
          Length = 303

 Score = 31.1 bits (67), Expect = 0.78
 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 5/49 (10%)

Query: 7   FFFDDETGELVTYGVNEETGEPMVNNPTVSFFGTPRPIPPMETPNFPEG 55
           +F D    E++ Y  N+ TG   V+NP V F    R I P E P FP+G
Sbjct: 172 YFIDTNNHEVLAYDYNQSTG--AVSNPKVIF--DLRKIRP-EGPLFPDG 215


>AB029490-1|BAA92938.1|  303|Drosophila melanogaster senescence
           marker protein-30 (SMP-30) protein.
          Length = 303

 Score = 31.1 bits (67), Expect = 0.78
 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 5/49 (10%)

Query: 7   FFFDDETGELVTYGVNEETGEPMVNNPTVSFFGTPRPIPPMETPNFPEG 55
           +F D    E++ Y  N+ TG   V+NP V F    R I P E P FP+G
Sbjct: 172 YFIDTNNHEVLAYDYNQSTG--AVSNPKVIF--DLRKIRP-EGPLFPDG 215


>X81194-1|CAA57066.1|  436|Drosophila melanogaster TIScc1 protein.
          Length = 436

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 20  GVNEETGEPMVNNPTVSFFGTPRPIPPMETPNFPEGPMSQTKKFQALKENIIAGSNPISH 79
           G++   G+ M+    +   G   P  P E+PN P  P+     +  +     AG+N +  
Sbjct: 337 GMSMGIGQGMIIGQGLGM-GHHGPATPPESPNVPISPVHTPPPYDVVVSGSGAGNNSVGS 395

Query: 80  RMLLFPSV 87
           + LL  SV
Sbjct: 396 KQLLQKSV 403


>U13397-1|AAA62666.1|  437|Drosophila melanogaster DTIS11 protein
           protein.
          Length = 437

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 20  GVNEETGEPMVNNPTVSFFGTPRPIPPMETPNFPEGPMSQTKKFQALKENIIAGSNPISH 79
           G++   G+ M+    +   G   P  P E+PN P  P+     +  +     AG+N +  
Sbjct: 338 GMSMGIGQGMIIGQGLGM-GHHGPATPPESPNVPISPVHTPPPYDVVVSGSGAGNNSVGS 396

Query: 80  RMLLFPSV 87
           + LL  SV
Sbjct: 397 KQLLQKSV 404


>AE014298-1801|AAN09314.1|  408|Drosophila melanogaster CG4070-PB,
           isoform B protein.
          Length = 408

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 20  GVNEETGEPMVNNPTVSFFGTPRPIPPMETPNFPEGPMSQTKKFQALKENIIAGSNPISH 79
           G++   G+ M+    +   G   P  P E+PN P  P+     +  +     AG+N +  
Sbjct: 309 GMSMGIGQGMIIGQGLGM-GHHGPATPPESPNVPISPVHTPPPYDVVVSGSGAGNNSVGS 367

Query: 80  RMLLFPSV 87
           + LL  SV
Sbjct: 368 KQLLQKSV 375


>AE014298-1800|AAF48194.2|  436|Drosophila melanogaster CG4070-PA,
           isoform A protein.
          Length = 436

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 20  GVNEETGEPMVNNPTVSFFGTPRPIPPMETPNFPEGPMSQTKKFQALKENIIAGSNPISH 79
           G++   G+ M+    +   G   P  P E+PN P  P+     +  +     AG+N +  
Sbjct: 337 GMSMGIGQGMIIGQGLGM-GHHGPATPPESPNVPISPVHTPPPYDVVVSGSGAGNNSVGS 395

Query: 80  RMLLFPSV 87
           + LL  SV
Sbjct: 396 KQLLQKSV 403


>AY051659-1|AAK93083.1| 1390|Drosophila melanogaster LD15203p
           protein.
          Length = 1390

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/40 (32%), Positives = 17/40 (42%)

Query: 8   FFDDETGELVTYGVNEETGEPMVNNPTVSFFGTPRPIPPM 47
           F  D T  L  YG+ +    P   N T SF      +PP+
Sbjct: 327 FLTDRTQRLGRYGIEDIKAHPFFRNDTWSFDNIRESVPPV 366


>AF151375-1|AAF03776.1| 1390|Drosophila melanogaster Rho-kinase
           protein.
          Length = 1390

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/40 (32%), Positives = 17/40 (42%)

Query: 8   FFDDETGELVTYGVNEETGEPMVNNPTVSFFGTPRPIPPM 47
           F  D T  L  YG+ +    P   N T SF      +PP+
Sbjct: 327 FLTDRTQRLGRYGIEDIKAHPFFRNDTWSFDNIRESVPPV 366


>AE014298-2432|AAF48631.1| 1390|Drosophila melanogaster CG9774-PA
           protein.
          Length = 1390

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/40 (32%), Positives = 17/40 (42%)

Query: 8   FFDDETGELVTYGVNEETGEPMVNNPTVSFFGTPRPIPPM 47
           F  D T  L  YG+ +    P   N T SF      +PP+
Sbjct: 327 FLTDRTQRLGRYGIEDIKAHPFFRNDTWSFDNIRESVPPV 366


>U51052-1|AAB01151.1|  558|Drosophila melanogaster alpha esterase
           protein.
          Length = 558

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 3/65 (4%)

Query: 35  VSFFGTPRPIPPMETPN--FPEGPMSQTKKFQALKENIIAGSNPISHRMLLFPSVMIFPE 92
           ++ F     I P  TP+   P+ P+   +        ++ G N     +L+FP V  +PE
Sbjct: 292 LTMFSFGPTIEPYLTPHCVIPKSPLEMMRDCWGNSIPMVIGGNSFEG-LLMFPEVNKWPE 350

Query: 93  LFCVL 97
           L C L
Sbjct: 351 LLCQL 355


>AY121675-1|AAM52002.1|  574|Drosophila melanogaster RE24825p
           protein.
          Length = 574

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 3/65 (4%)

Query: 35  VSFFGTPRPIPPMETPN--FPEGPMSQTKKFQALKENIIAGSNPISHRMLLFPSVMIFPE 92
           ++ F     I P  TP+   P+ P+   +        ++ G N     +L+FP V  +PE
Sbjct: 308 LTMFSFGPTIEPYLTPHCVIPKSPLEMMRDCWGNSIPMVIGGNSFEG-LLMFPEVNKWPE 366

Query: 93  LFCVL 97
           L C L
Sbjct: 367 LLCQL 371


>AE014297-620|AAF54012.2|  574|Drosophila melanogaster CG1121-PA
           protein.
          Length = 574

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 3/65 (4%)

Query: 35  VSFFGTPRPIPPMETPN--FPEGPMSQTKKFQALKENIIAGSNPISHRMLLFPSVMIFPE 92
           ++ F     I P  TP+   P+ P+   +        ++ G N     +L+FP V  +PE
Sbjct: 308 LTMFSFGPTIEPYLTPHCVIPKSPLEMMRDCWGNSIPMVIGGNSFEG-LLMFPEVNKWPE 366

Query: 93  LFCVL 97
           L C L
Sbjct: 367 LLCQL 371


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.324    0.140    0.428 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,971,300
Number of Sequences: 52641
Number of extensions: 327490
Number of successful extensions: 965
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 956
Number of HSP's gapped (non-prelim): 16
length of query: 166
length of database: 24,830,863
effective HSP length: 80
effective length of query: 86
effective length of database: 20,619,583
effective search space: 1773284138
effective search space used: 1773284138
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 58 (27.5 bits)